Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0480.Seq
         (598 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   2.3  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   4.0  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   5.3  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    21   6.9  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    21   6.9  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    21   6.9  
AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...    21   6.9  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    21   6.9  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   9.2  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   9.2  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -1

Query: 493 GSPGFCTVEPRDLAS-AACARFLFRISSKSLLLLNGLTPPAISFLTS 356
           G+   C V  R+ +   A   +LF ++   LLLL    PP I ++ S
Sbjct: 70  GNVSTCVVIARNKSMHTATNYYLFSLAVSDLLLLISGLPPEIYYIWS 116


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 497 ERQPRVLYC*TARFGFSSLCPLSL 426
           E + R+L+    R GF + CP +L
Sbjct: 251 EIEKRLLFSHNDRLGFLTFCPTNL 274


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +2

Query: 92   GLATLRHEDPTPICFDSLR 148
            G A +    P P CFDS R
Sbjct: 1044 GAAAMASAAPMPACFDSDR 1062


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 293 TFVFIVCVFAW 261
           T VF+ C+F W
Sbjct: 217 TKVFVTCIFIW 227


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 252 NSAPREYADYEDEGDYPAD 308
           N  P+E  D +  G++P D
Sbjct: 47  NDTPKELLDGQFRGEFPQD 65


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 252 NSAPREYADYEDEGDYPAD 308
           N  P+E  D +  G++P D
Sbjct: 21  NDTPKELLDGQFRGEFPQD 39


>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 417 EILKRKRAQAAEAK 458
           E+L +KR++ AEAK
Sbjct: 135 EVLNKKRSKKAEAK 148


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 293 TFVFIVCVFAW 261
           T VF+ C+F W
Sbjct: 217 TKVFVTCIFIW 227


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = +1

Query: 28  TCTEPQRGERKVRNYAGLQHQRPSNTQT 111
           +CT P RG     +  G  H  P   +T
Sbjct: 15  SCTRPSRGNAVPSSQRGNVHNDPLVVET 42


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = +1

Query: 28  TCTEPQRGERKVRNYAGLQHQRPSNTQT 111
           +CT P RG     +  G  H  P   +T
Sbjct: 15  SCTRPSRGNAVPSSQRGNVHNDPLVVET 42


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,460
Number of Sequences: 438
Number of extensions: 2600
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)