Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0478.Seq
         (697 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4VMQ2 Cluster: Putative uncharacterized protein; n=1; ...    33   5.1  
UniRef50_A4U252 Cluster: Putative uncharacterized protein; n=1; ...    33   6.7  

>UniRef50_A4VMQ2 Cluster: Putative uncharacterized protein; n=1;
           Pseudomonas stutzeri A1501|Rep: Putative uncharacterized
           protein - Pseudomonas stutzeri (strain A1501)
          Length = 599

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +3

Query: 39  GNAWEEVVRCGGGKVRYYSE*GGRRPDTKRTV-GSLLVITR 158
           GNAW+E++  GGG  +Y +   G+  D +R V G L+ ++R
Sbjct: 240 GNAWQEILAVGGGSGQYMAVVLGQISDQRRDVLGQLVGVSR 280


>UniRef50_A4U252 Cluster: Putative uncharacterized protein; n=1;
           Magnetospirillum gryphiswaldense|Rep: Putative
           uncharacterized protein - Magnetospirillum
           gryphiswaldense
          Length = 176

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +3

Query: 45  AWEEVVRC-GGGKVRYYSE*GGR-RPDTKRTVGSLLVITRKPSAPGWTGL 188
           AWE  V   GGGKV Y +    R +   K  VGS + IT +P +PG   L
Sbjct: 40  AWEAYVYPEGGGKVCYMAAQADRLQGGDKGRVGSAIAITHRPKSPGEVSL 89


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,999,386
Number of Sequences: 1657284
Number of extensions: 11743479
Number of successful extensions: 24945
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24940
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)