Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0478.Seq
         (697 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0625 - 24547435-24547569,24547674-24547742,24547871-245479...    28   6.2  
02_04_0513 - 23569212-23569675,23569759-23569801,23569888-235700...    28   6.2  

>02_04_0625 -
           24547435-24547569,24547674-24547742,24547871-24547997,
           24548086-24548209,24548714-24548832,24548953-24549044,
           24549124-24549329,24549429-24549534,24549636-24549740,
           24549836-24549942,24550030-24550253,24550341-24550468,
           24550945-24551022,24551338-24552012,24552655-24552798,
           24552985-24553064,24553958-24554029,24554124-24554343,
           24554460-24554590,24555118-24555243,24555567-24555695,
           24556156-24556318,24556408-24556545,24557198-24557317,
           24557521-24557682,24557751-24557876,24558172-24558342,
           24558435-24558590,24559061-24559408
          Length = 1526

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/42 (28%), Positives = 24/42 (57%)
 Frame = +2

Query: 311 VVCAAAAGPPTNRERLMLVLGPTARVYFVMYFLSYTYFNVNK 436
           V+C    G P + +RL  ++GP  + + + Y  S+  F++N+
Sbjct: 408 VLCTVTLGAPGDAQRLDSIVGPPTKRFMLHY--SFPPFSINE 447


>02_04_0513 -
           23569212-23569675,23569759-23569801,23569888-23570000,
           23570099-23570158,23570472-23570541,23570887-23570951,
           23571548-23571685,23571764-23573015
          Length = 734

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +1

Query: 526 RXTDTKKSPMMKTFKIKYSGISN*IKKPVFTVPVKPN 636
           + + +++  + K F+ +   + N +KKP F VPV  N
Sbjct: 77  KMSSSERRHLRKRFRTELDSVRNLLKKPEFAVPVPVN 113


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,664,146
Number of Sequences: 37544
Number of extensions: 336645
Number of successful extensions: 684
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)