Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0477.Seq
         (698 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.7  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   4.9  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    22   4.9  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    22   4.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.9  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   8.5  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 265  RKSEEVEINKTSNYTTIIS 321
            R  +E+E+ KTS  TT+++
Sbjct: 1160 RSVDEMEVRKTSALTTVLT 1178


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 265  RKSEEVEINKTSNYTTIIS 321
            R  +E+E+ KTS  TT+++
Sbjct: 1156 RSVDEMEVRKTSALTTVLT 1174


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +3

Query: 66  KIDIFLNTIRCFSVTKTRNMKLVQFSYKDSPKNIRVGYLEG 188
           +ID+ + T++  S  K RN  L + S     ++  V +L+G
Sbjct: 661 EIDVAIKTLKPGSADKARNDFLTEASIMGQFEHPNVIFLQG 701


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -2

Query: 574 SASFXXXAAGLGAPQXRTAPLPSTXLVTSVLILT 473
           + SF    A +GA     A +PS  L+T +++LT
Sbjct: 426 TVSFTATLASIGA-----ASIPSAALITMLIVLT 454


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 355 NPLYRLELQGSLPRAE 402
           +P YRLELQ  LP  E
Sbjct: 332 HPKYRLELQKRLPWLE 347


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 11/36 (30%), Positives = 15/36 (41%)
 Frame = +2

Query: 230 DHFAPNTQDGDLEKVKKLKSTKPATIPLSSVTLTAP 337
           D FA      D  K     ++ PAT+  +  T T P
Sbjct: 194 DEFANGGAARDESKAGSTDASTPATVTTTGATTTLP 229


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 348 TPCMGAVRVTDDSGIVAGFVD 286
           T C+GA  VT +SG    F+D
Sbjct: 179 TQCIGAFDVTLESGERVTFLD 199



 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 103 EKHLIVFRKMSILLTLF 53
           EKHLI ++KM  +  LF
Sbjct: 433 EKHLIEYKKMLKIKRLF 449


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,458
Number of Sequences: 438
Number of extensions: 3436
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)