Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0476.Seq
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   7.3  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.7  

>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 13/55 (23%), Positives = 23/55 (41%)
 Frame = +3

Query: 312 KSIVEYEHLESVLRDEKAQQTELDCLNYLAQKQLVELLKKVPTEADELAMIENAW 476
           K + +   +  V    K    +LD  N + QK L+ L+  V    +    + +AW
Sbjct: 24  KKLEQMRQVHEVDNQLKQMGCDLDIPNSVVQKHLILLMVLVNLIFNTCGEVFSAW 78


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 240 RFLQFIGEYGQLLGL 196
           +FL+ I EYG+  GL
Sbjct: 161 KFLRAIEEYGRFFGL 175


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 470 VLYHC*FISFGGHFL 426
           +L++C FI F  HFL
Sbjct: 83  LLFYCPFIIFTVHFL 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,180
Number of Sequences: 336
Number of extensions: 3320
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)