Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0476.Seq
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19552| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 30 2.1
SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_53615| Best HMM Match : GETHR (HMM E-Value=5.3e-09) 29 2.7
SB_48487| Best HMM Match : RWP-RK (HMM E-Value=6.1) 29 2.7
SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_30044| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_32767| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_6540| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_57069| Best HMM Match : GETHR (HMM E-Value=1.7e-10) 28 6.3
SB_23835| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_51558| Best HMM Match : DSS1_SEM1 (HMM E-Value=0.2) 28 8.4
SB_17763| Best HMM Match : IBN_N (HMM E-Value=3.4e-20) 28 8.4
SB_15448| Best HMM Match : Utp11 (HMM E-Value=0.89) 28 8.4
SB_10861| Best HMM Match : Ribosomal_L10 (HMM E-Value=0.0017) 28 8.4
>SB_19552| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 211
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +3
Query: 330 EHLESVLRDEKAQQTELDCLNYLAQKQLVELLKKVPTEADELAMIE-NAWQQTSSYGEPA 506
EH E R++K + + A+KQ E++K+ P ADE + E ++ S +P
Sbjct: 10 EHTEEEKREQKRRWRQRQKEKKRAKKQADEVVKEQPFVADEQSKSERRVCERVSKPVQPL 69
Query: 507 SLGKQEI 527
GKQ +
Sbjct: 70 CRGKQMV 76
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 453 LAMIENAWQQTSSYGEPASLGKQEILPLFNSDNKRV 560
L ++ AWQQ SY +P +I+ LFN + V
Sbjct: 911 LTSVKVAWQQHDSYAKPPVQAPHDIVSLFNGSRQVV 946
>SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 932
Score = 29.9 bits (64), Expect = 2.1
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Frame = +3
Query: 252 QLASKGQHAHRDSLVKSGTRKSIVEY-----EHLESVLRDEKAQQTELDCLNYLAQKQLV 416
+LA RD + + G + +VE EH E+ L+D+K +L+ N Q L
Sbjct: 615 ELADSKSLELRDLVDQLGASEKLVETWKHRSEHAEAALKDDKNSVKQLNEKNETLQNDLA 674
Query: 417 ELLKKVPTEADELAMIENAWQQTSSYGEP--ASL-GKQEILPLFNSDNKRVREEIPS 578
++++ +L+ +A Q +S E ASL K E + NS + EE+ S
Sbjct: 675 SRMEELGEVKRKLSETTDALQHETSAAEQKLASLAAKLEEAFVANSAKTKEIEELTS 731
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 29.9 bits (64), Expect = 2.1
Identities = 30/107 (28%), Positives = 43/107 (40%), Gaps = 6/107 (5%)
Frame = +2
Query: 143 RRCAASRRDLKEHPNSRHRPSSCPYSPMN*RKRCYVSISEQRAARP---PRQSREIRNPQ 313
R + RRD K + + R P P R+R S S +R P P R ++P
Sbjct: 868 REASPPRRDRKRYDSPPRRRRRSPSPPPRRRRRDSYSPSRRRRDSPTPSPPPRRRRKSP- 926
Query: 314 VYCGIRAPGICAQRRKSPANG---TRLPQLPRAETARGITEESAHRS 445
+P +RR+SP+N R LP + R T S R+
Sbjct: 927 ------SPSPPRRRRRSPSNSPPPMRSSPLPPPQRKRASTPPSPRRA 967
>SB_53615| Best HMM Match : GETHR (HMM E-Value=5.3e-09)
Length = 653
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +3
Query: 141 SADVQRREEISRNTPTRATGQAAVHTRQ*TEGNVVMYQLASKGQHAHRDSLVKS-GTRKS 317
S RE +S +T R + + H R+ + + S+ HA R+SL +S R+S
Sbjct: 460 SESTHARESLSESTHARESLSESTHARESLSESTHARESLSESTHA-RESLSESTHARES 518
Query: 318 IVEYEHLESVLRD 356
+ E H LR+
Sbjct: 519 LSESTHARESLRE 531
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +3
Query: 123 ENVSKASADVQRREEISRNTPTRATGQAAVHTRQ*TEGNVVMYQLASKGQHAHRDSLVKS 302
EN+S+++ RE +S +T R + + H R+ + + + S+ HA R+SL +S
Sbjct: 297 ENLSEST---HARESLSESTHARESLSESTHARESLKESTHARENLSESTHA-RESLSES 352
Query: 303 -GTRKSIVEYEHLESVLRD 356
R+S+ E H L++
Sbjct: 353 THARESLSESTHARESLKE 371
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +3
Query: 141 SADVQRREEISRNTPTRATGQAAVHTRQ*TEGNVVMYQLASKGQHAHRDSLVKSGTRKSI 320
S RE +S +T R + + H R+ + + S+ HA + R+S+
Sbjct: 480 SESTHARESLSESTHARESLSESTHARESLSESTHARESLSESTHARESLRESTHARESL 539
Query: 321 VEYEHL-ESVLRDEKAQQT 374
E H ES+ +A+++
Sbjct: 540 SESTHARESLSESTRARES 558
>SB_48487| Best HMM Match : RWP-RK (HMM E-Value=6.1)
Length = 426
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 519 QEILPLFNSDNKRVREEIPSIY*LREMTSTF 611
Q ILP+F+ NK+++ E P I+ LR+ S F
Sbjct: 263 QSILPVFSELNKQLQGEEPQIHCLRQGLSDF 293
>SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +2
Query: 62 RCRHKLNRKSSILKLNSAMCRERFKS*R----RCAASRRDLKEHPNSRHRPS 205
R RHK +R S S R R K+ R R SR + ++H SRH+ S
Sbjct: 76 RSRHKTSRHESSRHKTSRHGRSRHKTSRHETSRHERSRHETRQHERSRHKTS 127
>SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +2
Query: 62 RCRHKLNRKSSILKLNSAMCRERFKS*R----RCAASRRDLKEHPNSRHRPS 205
R RHK +R S S R R K+ R R SR + ++H SRH+ S
Sbjct: 36 RSRHKTSRHESSRHKTSRHERSRHKTSRHETSRHERSRHETRQHERSRHKTS 87
>SB_30044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 492 YGEPASLGKQEILPLFNSDNKRVREEIPSIY*LREMTSTF 611
Y A + ILP+F+ NK+++ E P I+ LR+ S F
Sbjct: 654 YDTLAFVSSTSILPVFSELNKQLQGEEPQIHCLRQGLSDF 693
>SB_32767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +3
Query: 408 QLVELLKKVPTEADELAMIENAWQQTSSYGEP 503
++ +++KK PTE +E + + W Y EP
Sbjct: 648 EIAKIVKKEPTECNETSSVWRPWYDILIYAEP 679
>SB_6540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 366
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +2
Query: 236 KRCYVSISEQRAARPPRQSREIRNPQVYCGIRAPGICAQRRKSPANGTRLPQLPRAETAR 415
++C ++E R R S + + + + G Q+R +P T LP++ TAR
Sbjct: 91 RKCLDEVAEVYNVRASRSSECMTHLEDEVTVNCDGDMRQKRLTPLTQTELPKMETQSTAR 150
>SB_57069| Best HMM Match : GETHR (HMM E-Value=1.7e-10)
Length = 547
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +3
Query: 141 SADVQRREEISRNTPTRATGQAAVHTRQ*TEGNVVMYQLASKGQHAHRDSLVKS-GTRKS 317
S RE +S +T R + + H R+ + + S+ HA R+SL +S R+S
Sbjct: 199 SESTHARESLSESTHARESLSESTHARESLSESTHARESLSESTHA-RESLSESTHARES 257
Query: 318 IVEYEHLESVLRD 356
+ E H L++
Sbjct: 258 LSESTHARESLKE 270
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +3
Query: 141 SADVQRREEISRNTPTRATGQAAVHTRQ*TEGNVVMYQLASKGQHAHRDSLVKS-GTRKS 317
S RE +S +T R + + H R+ + + + S+ HA R+SL +S R+S
Sbjct: 239 SESTHARESLSESTHARESLSESTHARESLKESTHARENLSESTHA-RESLSESTHARES 297
Query: 318 IVEYEHLESVLRD 356
+ E H L++
Sbjct: 298 LSESTHARESLKE 310
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +3
Query: 123 ENVSKASADVQRREEISRNTPTRATGQAAVHTRQ*TEGNVVMYQLASKGQHAHRDSLVKS 302
EN+S+++ RE +S +T R + + H R+ + + S+ HA R+SL +S
Sbjct: 316 ENLSEST---HARENLSESTHARESLSESTHARESLSESTHARESLSESTHA-RESLSES 371
Query: 303 -GTRKSIVEYEHLESVLRDEKAQQTEL 380
R+S+ E H L + + + L
Sbjct: 372 THARESLKESTHARENLSESRHARESL 398
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +3
Query: 123 ENVSKASADVQRREEISRNTPTRATGQAAVHTRQ*TEGNVVMYQLASKGQHAHRDSLVKS 302
EN+S+++ RE +S +T R + + H R+ + + S+ HA R+SL +S
Sbjct: 326 ENLSEST---HARESLSESTHARESLSESTHARESLSESTHARESLSESTHA-RESLKES 381
Query: 303 -GTRKSIVEYEHLESVLRDEKAQQTEL 380
R+++ E H L + + + L
Sbjct: 382 THARENLSESRHARESLSESRHARESL 408
Score = 27.9 bits (59), Expect = 8.4
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +3
Query: 141 SADVQRREEISRNTPTRATGQAAVHTRQ*TEGNVVMYQLASKGQHAHRDSLVKS-GTRKS 317
S RE +S +T R + + H R+ + + + S+ +HA R+SL +S R+S
Sbjct: 349 SESTHARESLSESTHARESLSESTHARESLKESTHARENLSESRHA-RESLSESRHARES 407
Query: 318 IVEYEHLESVLRD 356
+ E H L +
Sbjct: 408 LSESTHARESLSE 420
>SB_23835| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 596
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +3
Query: 318 IVEYEHLESVLRDEKAQQTELDCLNYLAQKQLVELLKKVPTEADELAMIENAWQQ 482
+V + E++LRD K+Q+ E D L + +++ + D +EN+W +
Sbjct: 480 MVSQKKREAILRDLKSQKEESDMLERTKRDIILDRTLRHQEMLDTRRKLENSWAE 534
>SB_51558| Best HMM Match : DSS1_SEM1 (HMM E-Value=0.2)
Length = 878
Score = 27.9 bits (59), Expect = 8.4
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +3
Query: 354 DEKAQQTELDCLNYLAQKQLVELLKKVPTEADELAMIENAWQQTSSYGEPASLGKQEILP 533
++K +Q EL+ L AQK L++ K+ A I A + S G P++ ++I
Sbjct: 553 NQKEKQQELENLQQQAQKLLLQREKEEEIALKNAANINGAESKASVEGAPSANPFKDIKG 612
Query: 534 LFNSDNKRV 560
L N K +
Sbjct: 613 LGNGKLKEL 621
>SB_17763| Best HMM Match : IBN_N (HMM E-Value=3.4e-20)
Length = 681
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -2
Query: 388 RQSSSVCWAFSSLS 347
R +S+VCWAFSSLS
Sbjct: 388 RVASNVCWAFSSLS 401
>SB_15448| Best HMM Match : Utp11 (HMM E-Value=0.89)
Length = 1328
Score = 27.9 bits (59), Expect = 8.4
Identities = 23/73 (31%), Positives = 31/73 (42%)
Frame = +2
Query: 182 PNSRHRPSSCPYSPMN*RKRCYVSISEQRAARPPRQSREIRNPQVYCGIRAPGICAQRRK 361
PN R P+S P P+N +K+ S + P++ RE + I G R
Sbjct: 58 PNGRGSPTSPPVPPINGKKQAATSYA-------PKKDREAFRSALVNIIMQDGAAPPPRP 110
Query: 362 SPANGTRLPQLPR 400
S A G LP L R
Sbjct: 111 SSA-GAELPPLER 122
>SB_10861| Best HMM Match : Ribosomal_L10 (HMM E-Value=0.0017)
Length = 169
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -1
Query: 368 LGFFVSEHRFQVLVFHNRLAGSGFHETVSVGVLP 267
L + +S+H +V +F NR+ +T+ G++P
Sbjct: 37 LRYALSKHNVKVKIFPNRVTHKALEDTIYDGIIP 70
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,044,078
Number of Sequences: 59808
Number of extensions: 450891
Number of successful extensions: 1428
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1426
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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