Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0476.Seq
         (698 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ109808-1|AAZ83370.1| 2479|Homo sapiens nephrocystin-6 protein.       36   0.18 
BC008641-1|AAH08641.1|  164|Homo sapiens CEP290 protein protein.       36   0.18 
AY590151-1|AAT01278.1|  534|Homo sapiens prostate cancer antigen...    36   0.18 
AB002371-1|BAA20828.2| 1540|Homo sapiens KIAA0373 protein.             36   0.18 
AK025632-1|BAB15196.1|  720|Homo sapiens protein ( Homo sapiens ...    35   0.32 
BC106765-1|AAI06766.1|  599|Homo sapiens interleukin 18 receptor...    31   5.2  
BC069630-1|AAH69630.1|  599|Homo sapiens interleukin 18 receptor...    31   5.2  
AF077346-1|AAC72196.1|  599|Homo sapiens interleukin-18 receptor...    31   5.2  
AC007248-4|AAY15049.1|  193|Homo sapiens unknown protein.              31   5.2  
Z97184-2|CAB09992.1|  777|Homo sapiens RAB2, member RAS oncogene...    30   9.1  
U68142-1|AAC50818.1|  518|Homo sapiens RalGDS-like protein.            30   9.1  
BX000343-5|CAI41832.1|  777|Homo sapiens ral guanine nucleotide ...    30   9.1  
BC032681-1|AAH32681.1|  777|Homo sapiens ral guanine nucleotide ...    30   9.1  
BC025710-1|AAH25710.1|  313|Homo sapiens SLC15A3 protein protein.      30   9.1  
BC017359-1|AAH17359.1|  394|Homo sapiens SFRS11 protein protein.       30   9.1  
BC005037-1|AAH05037.1|  644|Homo sapiens RGL2 protein protein.         30   9.1  
BC000316-1|AAH00316.1|  516|Homo sapiens RGL2 protein protein.         30   9.1  
AL662827-6|CAI17521.1|  777|Homo sapiens ral guanine nucleotide ...    30   9.1  
AL662820-6|CAI18118.1|  777|Homo sapiens ral guanine nucleotide ...    30   9.1  
AL353771-4|CAI22333.1|  389|Homo sapiens splicing factor, argini...    30   9.1  

>DQ109808-1|AAZ83370.1| 2479|Homo sapiens nephrocystin-6 protein.
          Length = 2479

 Score = 35.5 bits (78), Expect = 0.18
 Identities = 19/78 (24%), Positives = 41/78 (52%)
 Frame = +3

Query: 339  ESVLRDEKAQQTELDCLNYLAQKQLVELLKKVPTEADELAMIENAWQQTSSYGEPASLGK 518
            +++L    +    L+C N   ++Q+  + K++    ++L  IE AW+Q +  G  +S+ K
Sbjct: 983  DNMLVQRTSNLEHLECENISLKEQVESINKELEITKEKLHTIEQAWEQETKLGNESSMDK 1042

Query: 519  QEILPLFNSDNKRVREEI 572
             +   + NSD   + ++I
Sbjct: 1043 AK-KSITNSDIVSISKKI 1059


>BC008641-1|AAH08641.1|  164|Homo sapiens CEP290 protein protein.
          Length = 164

 Score = 35.5 bits (78), Expect = 0.18
 Identities = 19/78 (24%), Positives = 41/78 (52%)
 Frame = +3

Query: 339 ESVLRDEKAQQTELDCLNYLAQKQLVELLKKVPTEADELAMIENAWQQTSSYGEPASLGK 518
           +++L    +    L+C N   ++Q+  + K++    ++L  IE AW+Q +  G  +S+ K
Sbjct: 43  DNMLVQRTSNLEHLECENISLKEQVESINKELEITKEKLHTIEQAWEQETKLGNESSMDK 102

Query: 519 QEILPLFNSDNKRVREEI 572
            +   + NSD   + ++I
Sbjct: 103 AK-KSITNSDIVSISKKI 119


>AY590151-1|AAT01278.1|  534|Homo sapiens prostate cancer antigen
           T21 protein.
          Length = 534

 Score = 35.5 bits (78), Expect = 0.18
 Identities = 19/78 (24%), Positives = 41/78 (52%)
 Frame = +3

Query: 339 ESVLRDEKAQQTELDCLNYLAQKQLVELLKKVPTEADELAMIENAWQQTSSYGEPASLGK 518
           +++L    +    L+C N   ++Q+  + K++    ++L  IE AW+Q +  G  +S+ K
Sbjct: 413 DNMLVQRTSNLEHLECENISLKEQVESINKELEITKEKLHTIEQAWEQETKLGNESSMDK 472

Query: 519 QEILPLFNSDNKRVREEI 572
            +   + NSD   + ++I
Sbjct: 473 AK-KSITNSDIVSISKKI 489


>AB002371-1|BAA20828.2| 1540|Homo sapiens KIAA0373 protein.
          Length = 1540

 Score = 35.5 bits (78), Expect = 0.18
 Identities = 19/78 (24%), Positives = 41/78 (52%)
 Frame = +3

Query: 339 ESVLRDEKAQQTELDCLNYLAQKQLVELLKKVPTEADELAMIENAWQQTSSYGEPASLGK 518
           +++L    +    L+C N   ++Q+  + K++    ++L  IE AW+Q +  G  +S+ K
Sbjct: 44  DNMLVQRTSNLEHLECENISLKEQVESINKELEITKEKLHTIEQAWEQETKLGNESSMDK 103

Query: 519 QEILPLFNSDNKRVREEI 572
            +   + NSD   + ++I
Sbjct: 104 AK-KSITNSDIVSISKKI 120


>AK025632-1|BAB15196.1|  720|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21979 fis, clone HEP06065. ).
          Length = 720

 Score = 34.7 bits (76), Expect = 0.32
 Identities = 18/70 (25%), Positives = 37/70 (52%)
 Frame = +3

Query: 339 ESVLRDEKAQQTELDCLNYLAQKQLVELLKKVPTEADELAMIENAWQQTSSYGEPASLGK 518
           +++L    +    L+C N   ++Q+  + K++    ++L  IE AW+Q +  G  +S+ K
Sbjct: 618 DNMLVQRTSNLEHLECENISLKEQVESINKELEITKEKLHTIEQAWEQETKLGNESSMDK 677

Query: 519 QEILPLFNSD 548
            +   + NSD
Sbjct: 678 AK-KSITNSD 686


>BC106765-1|AAI06766.1|  599|Homo sapiens interleukin 18 receptor
           accessory protein protein.
          Length = 599

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -2

Query: 538 NKGRISCLPKLAGSPYDEVCC 476
           N G   C PK+  SPYD  CC
Sbjct: 120 NSGSYICRPKMIKSPYDVACC 140


>BC069630-1|AAH69630.1|  599|Homo sapiens interleukin 18 receptor
           accessory protein protein.
          Length = 599

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -2

Query: 538 NKGRISCLPKLAGSPYDEVCC 476
           N G   C PK+  SPYD  CC
Sbjct: 120 NSGSYICRPKMIKSPYDVACC 140


>AF077346-1|AAC72196.1|  599|Homo sapiens interleukin-18 receptor
           accessory protein-like protein.
          Length = 599

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -2

Query: 538 NKGRISCLPKLAGSPYDEVCC 476
           N G   C PK+  SPYD  CC
Sbjct: 120 NSGSYICRPKMIKSPYDVACC 140


>AC007248-4|AAY15049.1|  193|Homo sapiens unknown protein.
          Length = 193

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -2

Query: 538 NKGRISCLPKLAGSPYDEVCC 476
           N G   C PK+  SPYD  CC
Sbjct: 120 NSGSYICRPKMIKSPYDVACC 140


>Z97184-2|CAB09992.1|  777|Homo sapiens RAB2, member RAS oncogene
           family-like protein.
          Length = 777

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 527 SALVQLGQQESQGGDSIDLLVERNDFNIPLEPHHREA 637
           S+L Q+  +E     S +LLV+      PLEPH ++A
Sbjct: 382 SSLCQIFSEEDNYSQSRELLVQEVKLQSPLEPHSKKA 418


>U68142-1|AAC50818.1|  518|Homo sapiens RalGDS-like protein.
          Length = 518

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 527 SALVQLGQQESQGGDSIDLLVERNDFNIPLEPHHREA 637
           S+L Q+  +E     S +LLV+      PLEPH ++A
Sbjct: 104 SSLCQIFSEEDNYSQSRELLVQEVKLQSPLEPHSKKA 140


>BX000343-5|CAI41832.1|  777|Homo sapiens ral guanine nucleotide
           dissociation stimulator-like 2 protein.
          Length = 777

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 527 SALVQLGQQESQGGDSIDLLVERNDFNIPLEPHHREA 637
           S+L Q+  +E     S +LLV+      PLEPH ++A
Sbjct: 382 SSLCQIFSEEDNYSQSRELLVQEVKLQSPLEPHSKKA 418


>BC032681-1|AAH32681.1|  777|Homo sapiens ral guanine nucleotide
           dissociation stimulator-like 2 protein.
          Length = 777

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 527 SALVQLGQQESQGGDSIDLLVERNDFNIPLEPHHREA 637
           S+L Q+  +E     S +LLV+      PLEPH ++A
Sbjct: 382 SSLCQIFSEEDNYSQSRELLVQEVKLQSPLEPHSKKA 418


>BC025710-1|AAH25710.1|  313|Homo sapiens SLC15A3 protein protein.
          Length = 313

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = -2

Query: 409 CFCAR*LRQSSSVCWAFSSLSTDSRCSYSTIDLRVPDFTRLSRWAC-CPL 263
           C+  R   ++S+ CWA +SL       +S+  L  P  +   RWA  CPL
Sbjct: 214 CWWWRLFSRTSASCWATASLWAVWAWHFSSSSLPPPSSSPSPRWAAKCPL 263


>BC017359-1|AAH17359.1|  394|Homo sapiens SFRS11 protein protein.
          Length = 394

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 3/118 (2%)
 Frame = +2

Query: 59  SRCRHKLNRKSSILKLNSAMCRERFKS*---RRCAASRRDLKEHPNSRHRPSSCPYSPMN 229
           SR R +    SS  + + +  R R  S    RR + S R  + H   R R S       +
Sbjct: 253 SRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRERGRRSRSTSKTRD 312

Query: 230 *RKRCYVSISEQRAARPPRQSREIRNPQVYCGIRAPGICAQRRKSPANGTRLPQLPRA 403
            +K       ++R+  PP+     R  +    +       +RR+   +GTR P+ PR+
Sbjct: 313 KKKE---DKEKKRSKTPPKSYSTARRSRSASSLHICDSRERRRRRSRSGTRSPKKPRS 367


>BC005037-1|AAH05037.1|  644|Homo sapiens RGL2 protein protein.
          Length = 644

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 527 SALVQLGQQESQGGDSIDLLVERNDFNIPLEPHHREA 637
           S+L Q+  +E     S +LLV+      PLEPH ++A
Sbjct: 249 SSLCQIFSEEDNYSQSRELLVQEVKLQSPLEPHSKKA 285


>BC000316-1|AAH00316.1|  516|Homo sapiens RGL2 protein protein.
          Length = 516

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 527 SALVQLGQQESQGGDSIDLLVERNDFNIPLEPHHREA 637
           S+L Q+  +E     S +LLV+      PLEPH ++A
Sbjct: 121 SSLCQIFSEEDNYSQSRELLVQEVKLQSPLEPHSKKA 157


>AL662827-6|CAI17521.1|  777|Homo sapiens ral guanine nucleotide
           dissociation stimulator-like 2 protein.
          Length = 777

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 527 SALVQLGQQESQGGDSIDLLVERNDFNIPLEPHHREA 637
           S+L Q+  +E     S +LLV+      PLEPH ++A
Sbjct: 382 SSLCQIFSEEDNYSQSRELLVQEVKLQSPLEPHSKKA 418


>AL662820-6|CAI18118.1|  777|Homo sapiens ral guanine nucleotide
           dissociation stimulator-like 2 protein.
          Length = 777

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 527 SALVQLGQQESQGGDSIDLLVERNDFNIPLEPHHREA 637
           S+L Q+  +E     S +LLV+      PLEPH ++A
Sbjct: 382 SSLCQIFSEEDNYSQSRELLVQEVKLQSPLEPHSKKA 418


>AL353771-4|CAI22333.1|  389|Homo sapiens splicing factor,
           arginine/serine-rich 11 protein.
          Length = 389

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 3/118 (2%)
 Frame = +2

Query: 59  SRCRHKLNRKSSILKLNSAMCRERFKS*---RRCAASRRDLKEHPNSRHRPSSCPYSPMN 229
           SR R +    SS  + + +  R R  S    RR + S R  + H   R R S       +
Sbjct: 253 SRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRERGRRSRSTSKTRD 312

Query: 230 *RKRCYVSISEQRAARPPRQSREIRNPQVYCGIRAPGICAQRRKSPANGTRLPQLPRA 403
            +K       ++R+  PP+     R  +    +       +RR+   +GTR P+ PR+
Sbjct: 313 KKKE---DKEKKRSKTPPKSYSTARRSRSASSLHICDSRERRRRRSRSGTRSPKKPRS 367


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,842,400
Number of Sequences: 237096
Number of extensions: 2160568
Number of successful extensions: 5150
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5150
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)