Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0476.Seq
(698 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly id... 31 0.97
At5g41140.1 68418.m05001 expressed protein 29 2.2
At2g32980.1 68415.m04042 expressed protein 29 3.0
At1g14690.1 68414.m01756 microtubule associated protein (MAP65/A... 29 3.0
At5g06670.1 68418.m00753 kinesin motor protein-related 29 3.9
At1g75960.1 68414.m08822 AMP-binding protein, putative similar t... 28 5.2
At5g57500.1 68418.m07185 expressed protein 28 6.8
At1g77580.2 68414.m09032 myosin heavy chain-related low similari... 28 6.8
At1g77580.1 68414.m09033 myosin heavy chain-related low similari... 28 6.8
At1g08590.1 68414.m00952 CLAVATA1 receptor kinase (CLV1) similar... 28 6.8
At4g39850.1 68417.m05646 peroxisomal ABC transporter (PXA1) iden... 27 9.0
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 27 9.0
At1g45976.1 68414.m05206 expressed protein 27 9.0
>At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly
identical to auxin transport protein; BIG [Arabidopsis
thaliana] GI:21779966; contains Pfam profiles PF02207:
Putative zinc finger in N-recognin, PF00569: Zinc finger
ZZ type
Length = 5098
Score = 30.7 bits (66), Expect = 0.97
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Frame = +3
Query: 228 TEGNVVMYQLASKGQHAHRDSLVKSGTRK---------SIVEYEHLESVLRDEKAQQTEL 380
TE V+Y L G+H+ ++SL+ + +K +IVEY L S+L D+ +
Sbjct: 3218 TEAKSVIYGLWHHGRHSFKESLLAALLQKVRYLPAYGQNIVEYTELVSLLLDKAPENNSK 3277
Query: 381 DCLNYLAQKQL 413
+N L + L
Sbjct: 3278 QAINELVDRCL 3288
>At5g41140.1 68418.m05001 expressed protein
Length = 983
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/96 (19%), Positives = 44/96 (45%)
Frame = +3
Query: 264 KGQHAHRDSLVKSGTRKSIVEYEHLESVLRDEKAQQTELDCLNYLAQKQLVELLKKVPTE 443
+ + A D++ K+ R + + LE ++ ++ + +K L ++++ T+
Sbjct: 829 ENREASADNITKTEQRSNEDRIKQLEGQIKLKENALEASSKIFIEKEKDLKNRIEELQTK 888
Query: 444 ADELAMIENAWQQTSSYGEPASLGKQEILPLFNSDN 551
+E++ +T E ++ E+LPL SDN
Sbjct: 889 LNEVSQNSQETDETLQGPEAIAMQYTEVLPLSKSDN 924
>At2g32980.1 68415.m04042 expressed protein
Length = 296
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 366 QQTELDCLNYLA--QKQLVELLKKVPTEADELAMIENAWQQTSSYGEPASLGKQEILPL 536
Q LDC+ A QKQ ELL K ++ L + +Q + ++ EP S+ + + P+
Sbjct: 127 QPYSLDCIPVEAEYQKQFSELLMKAASDYGALTASVSDFQWSQNFKEPPSVWGEMLRPI 185
>At1g14690.1 68414.m01756 microtubule associated protein
(MAP65/ASE1) family protein low similarity to SP|P32380
NUF1 protein (Spindle poly body spacer protein SPC110)
{Saccharomyces cerevisiae}, smooth muscle myosin heavy
chain [Homo sapiens] GI:4417214; contains Pfam profile
PF03999: Microtubule associated protein (MAP65/ASE1
family)
Length = 707
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 342 SVLRDEKAQQT--ELDCLNYLAQKQLVELLKKVPTEADELAMIENAWQQTSS 491
++L E +Q E+DC N L ++ EL+ K TE + L + + TS+
Sbjct: 311 NILSSETIEQVSAEVDCFNKLKASRMKELVMKRRTELENLCRLAHIEADTST 362
>At5g06670.1 68418.m00753 kinesin motor protein-related
Length = 992
Score = 28.7 bits (61), Expect = 3.9
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Frame = +3
Query: 171 SRNTPTRATGQAA-VHTR-Q*TEGNVVMYQLAS--KGQHAHRDSLVKSGTRKSIVEYEHL 338
S +TP+ G+ + HT + +EG+ + Q+ + + AH DS + T ++ ++
Sbjct: 581 SNSTPSTPQGEGSDFHTESRLSEGSALADQIIETMENREAHEDSFHEIETPETRIKMIDQ 640
Query: 339 ESVLRDEKAQQTELDCLNYLAQKQLVELLKKVPTEADELAMIENAWQQTSSYGEP-ASLG 515
+LR+++ +E + K L E K P + A I N + + A+LG
Sbjct: 641 MEILREQQKTLSEEMAQQSRSFKLLSEEAAKAPQNEEIKAEIINLNGDIKAKNDQIATLG 700
Query: 516 KQ 521
KQ
Sbjct: 701 KQ 702
>At1g75960.1 68414.m08822 AMP-binding protein, putative similar to
AMP-binding protein GI:1903034 from [Brassica napus];
contains Pfam profile: PF00501 AMP-binding enzyme;
identical to cDNA adenosine monophosphate binding
protein 8 AMPBP8 (AMPBP8) GI:20799724
Length = 544
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/63 (25%), Positives = 27/63 (42%)
Frame = -2
Query: 250 YITTFPSVHWRVWTAAWPVARVGVFLEISSRRCTSALAFETFSAHC*VQLQDRRLSVQLV 71
Y+ T P H WT W +A VG + R+ + + H + + +Q++
Sbjct: 228 YLWTLPIFHANGWTYPWGIAAVG-GTNVCVRKLHAPSIYHLIRDHGVTHMYGAPIVLQIL 286
Query: 70 SAS 62
SAS
Sbjct: 287 SAS 289
>At5g57500.1 68418.m07185 expressed protein
Length = 318
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1
Query: 569 LLPDSLVVRVEQGQNLLLAQTSRFSIRRSLLPSVLYH 459
L PD++ V + + Q + + F++ +L PS LYH
Sbjct: 280 LWPDTIAVHLLKNQEKWIRTLNYFNVTSNLKPSKLYH 316
>At1g77580.2 68414.m09032 myosin heavy chain-related low similarity
to SP|P08799 Myosin II heavy chain, non muscle
{Dictyostelium discoideum}
Length = 779
Score = 27.9 bits (59), Expect = 6.8
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 1/117 (0%)
Frame = +3
Query: 108 TQQCAENVSKASADVQRREEISRNTPTRATGQAAVHTRQ*TEGNVVMYQLASKGQHAHRD 287
T++ E + K A+ +EE+ +A VH + + +K +
Sbjct: 394 TKELEEKLEKLEAE---KEELKSEVKCNRE-KAVVHVENSLAAEIEVLTSRTKELEEQLE 449
Query: 288 SLVKSGTR-KSIVEYEHLESVLRDEKAQQTELDCLNYLAQKQLVELLKKVPTEADEL 455
L +S V+ E+V + E + TE++ L KQL E L+K+ E DEL
Sbjct: 450 KLEAEKVELESEVKCNREEAVAQVENSLATEIEVLTCRI-KQLEEKLEKLEVEKDEL 505
>At1g77580.1 68414.m09033 myosin heavy chain-related low similarity
to SP|P08799 Myosin II heavy chain, non muscle
{Dictyostelium discoideum}
Length = 629
Score = 27.9 bits (59), Expect = 6.8
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 1/117 (0%)
Frame = +3
Query: 108 TQQCAENVSKASADVQRREEISRNTPTRATGQAAVHTRQ*TEGNVVMYQLASKGQHAHRD 287
T++ E + K A+ +EE+ +A VH + + +K +
Sbjct: 360 TKELEEKLEKLEAE---KEELKSEVKCNRE-KAVVHVENSLAAEIEVLTSRTKELEEQLE 415
Query: 288 SLVKSGTR-KSIVEYEHLESVLRDEKAQQTELDCLNYLAQKQLVELLKKVPTEADEL 455
L +S V+ E+V + E + TE++ L KQL E L+K+ E DEL
Sbjct: 416 KLEAEKVELESEVKCNREEAVAQVENSLATEIEVLTCRI-KQLEEKLEKLEVEKDEL 471
>At1g08590.1 68414.m00952 CLAVATA1 receptor kinase (CLV1) similar to
receptor-like protein kinase (Ipomoea nil) (U77888)
Length = 1029
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +3
Query: 357 EKAQQTELDCLNYLAQKQLVELLKKVPTEADELAMIENAWQQTSSYGEPASLGKQEILPL 536
E + L LN L + QL ++ E L ++E WQ + P LGK L
Sbjct: 312 EVGELKNLQLLN-LMRNQLTGIIPSKIAELPNLEVLE-LWQNSLMGSLPVHLGKNSPLKW 369
Query: 537 FNSDNKRVREEIPS 578
+ + ++ +IPS
Sbjct: 370 LDVSSNKLSGDIPS 383
>At4g39850.1 68417.m05646 peroxisomal ABC transporter (PXA1)
identical to peroxisomal ABC transporter PXA1
GI:15320529 from [Arabidopsis thaliana]; contains Pfam
profile PF00005: ABC transporter;
Length = 1337
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Frame = -1
Query: 572 NLLPDSLVVRVEQGQNLLL------AQTSRFSIRRSLLPSVLYH 459
N+L + L +RVEQG NLL+ ++S F + L P V H
Sbjct: 461 NVLVEDLTLRVEQGSNLLITGPNGSGKSSLFRVLGGLWPLVSGH 504
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 27.5 bits (58), Expect = 9.0
Identities = 23/80 (28%), Positives = 36/80 (45%)
Frame = +2
Query: 158 SRRDLKEHPNSRHRPSSCPYSPMN*RKRCYVSISEQRAARPPRQSREIRNPQVYCGIRAP 337
+RR P +R R S P P + ++R+ PP +R R+P R+P
Sbjct: 317 ARRRRSPSPPARRRRSPSP--PARRHRSPTPPARQRRSPSPP--ARRHRSPPPARRRRSP 372
Query: 338 GICAQRRKSPANGTRLPQLP 397
A+RR+SP+ R + P
Sbjct: 373 SPPARRRRSPSPPARRRRSP 392
>At1g45976.1 68414.m05206 expressed protein
Length = 325
Score = 27.5 bits (58), Expect = 9.0
Identities = 22/77 (28%), Positives = 39/77 (50%)
Frame = +3
Query: 270 QHAHRDSLVKSGTRKSIVEYEHLESVLRDEKAQQTELDCLNYLAQKQLVELLKKVPTEAD 449
+HA D +K G +K++ E E V++ + + EL+ +N +K K++ +
Sbjct: 162 RHAILDK-IKRGQQKTVSLME--EKVVQKLREKDEELERIN---RKN-----KELEVRME 210
Query: 450 ELAMIENAWQQTSSYGE 500
+L M AWQQ + Y E
Sbjct: 211 QLTMEAEAWQQRAKYNE 227
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,526,849
Number of Sequences: 28952
Number of extensions: 323133
Number of successful extensions: 934
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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