BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= tesV0472.Seq (698 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 119 3e-28 SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 82 6e-17 SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 69 6e-13 SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 67 2e-12 SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 66 3e-12 SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 62 7e-11 SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 57 2e-09 SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 52 1e-07 SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 30 0.28 SPBC1685.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 6.0 SPAC11D3.07c |||transcription factor|Schizosaccharomyces pombe|c... 25 7.9 >SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit Cct7|Schizosaccharomyces pombe|chr 2|||Manual Length = 558 Score = 119 bits (287), Expect = 3e-28 Identities = 55/80 (68%), Positives = 67/80 (83%) Frame = +2 Query: 17 QPQILLLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDG 196 Q +++L+EGTD +QG+ QL+SNINAC V D +RTTLGP G DKL+VD G+ VISNDG Sbjct: 7 QIPVIVLKEGTDDSQGRGQLLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDG 66 Query: 197 ATIMKLLDIIHPAAKTLVDM 256 ATIMKLLDI+HPAAKTLVD+ Sbjct: 67 ATIMKLLDIVHPAAKTLVDI 86 Score = 101 bits (242), Expect = 1e-22 Identities = 57/127 (44%), Positives = 80/127 (62%), Gaps = 1/127 (0%) Frame = +1 Query: 256 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVK 435 A++QDAEVGDGTTSVV+ AGE+L+ + FVE+GV ++IR R A++LA+ KIKE A+ Sbjct: 87 ARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLIIRGYRKAAQLAVNKIKEIAIH 146 Query: 436 IDISR*RNQRDLLLKCASTAMSFEMIHQPEGITSLKICC*MLSCLWTFHFXPL-RT*FGI 612 +D+S RDLL KCASTAM+ ++I + + + + T L GI Sbjct: 147 LDLSDEGKLRDLLTKCASTAMNSKLIRSNSTFFTKMV----VDAVLTLDQEDLNENMIGI 202 Query: 613 KKVXGGS 633 KKV GG+ Sbjct: 203 KKVPGGA 209 Score = 30.3 bits (65), Expect = 0.28 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +2 Query: 590 LFEHDLESRRXPVGALEDSFPGFPEXAFKKTFSYVG 697 L E+ + ++ P GA+EDS AFKKTFSY G Sbjct: 195 LNENMIGIKKVPGGAMEDSLL-VKGVAFKKTFSYAG 229 >SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit Cct4|Schizosaccharomyces pombe|chr 2|||Manual Length = 527 Score = 82.2 bits (194), Expect = 6e-17 Identities = 39/72 (54%), Positives = 54/72 (75%), Gaps = 2/72 (2%) Frame = +2 Query: 53 QTQGKPQLV--SNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDII 226 Q + KPQ V SNI A + V DA+RT+LGP+GMDK+I G+ +++NDGATI+K L ++ Sbjct: 12 QDREKPQEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVL 71 Query: 227 HPAAKTLVDMQS 262 HPAAK LVD+ + Sbjct: 72 HPAAKMLVDLSA 83 Score = 67.3 bits (157), Expect = 2e-12 Identities = 32/86 (37%), Positives = 58/86 (67%) Frame = +1 Query: 262 SQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKID 441 +QD E GDGTTSVVILAG +L + +++G+HP V+ + + A+ ++ +KE A+ I+ Sbjct: 84 AQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVDCMKENALAIE 143 Query: 442 ISR*RNQRDLLLKCASTAMSFEMIHQ 519 +S R+ LL+ A+T+++ +++ Q Sbjct: 144 LS----DRESLLRAATTSLNSKIVSQ 165 >SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit Cct3|Schizosaccharomyces pombe|chr 2|||Manual Length = 528 Score = 68.9 bits (161), Expect = 6e-13 Identities = 28/81 (34%), Positives = 52/81 (64%) Frame = +2 Query: 14 MQPQILLLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISND 193 MQ + ++ ++ G +SNI A + V D +RT LGPR M K+++D G +++ND Sbjct: 1 MQSPVFVMNTNGNRQVGHKAQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTND 60 Query: 194 GATIMKLLDIIHPAAKTLVDM 256 G I++ +++ HPAAK+++++ Sbjct: 61 GHAILREIEVAHPAAKSMIEL 81 Score = 64.5 bits (150), Expect = 1e-11 Identities = 32/81 (39%), Positives = 48/81 (59%) Frame = +1 Query: 256 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVK 435 A++QD EVGDGTTSV+ILAGEIL P ++ +HP V+IR+ + A A+ I E + Sbjct: 82 ARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDALSIIDEITLP 141 Query: 436 IDISR*RNQRDLLLKCASTAM 498 +++ L+ C T + Sbjct: 142 VNVDDNAEMFRLIRTCIGTKL 162 >SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit Cct8 |Schizosaccharomyces pombe|chr 2|||Manual Length = 546 Score = 67.3 bits (157), Expect = 2e-12 Identities = 32/75 (42%), Positives = 51/75 (68%), Gaps = 1/75 (1%) Frame = +2 Query: 32 LLREGTDQTQG-KPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIM 208 L REG QG + ++ N NA + + + RT+LGP G +K++V+H + ++ND ATI+ Sbjct: 13 LFREGYRIMQGVEDAVIRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATII 72 Query: 209 KLLDIIHPAAKTLVD 253 + L++IHPAAK +VD Sbjct: 73 RELEVIHPAAKLVVD 87 Score = 31.9 bits (69), Expect = 0.091 Identities = 14/55 (25%), Positives = 28/55 (50%) Frame = +1 Query: 259 KSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKE 423 + Q+ E+GD VV+ GE+L + + + G+ P + + A +E ++E Sbjct: 90 QQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLEE 144 >SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit Cct1|Schizosaccharomyces pombe|chr 2|||Manual Length = 556 Score = 66.5 bits (155), Expect = 3e-12 Identities = 28/69 (40%), Positives = 46/69 (66%) Frame = +2 Query: 50 DQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIH 229 ++ G+ N+ A + + V+++LGP G+DK++VD G ++NDGATI+ LLD+ H Sbjct: 15 EKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEH 74 Query: 230 PAAKTLVDM 256 PA K LV++ Sbjct: 75 PAGKVLVEL 83 Score = 58.8 bits (136), Expect = 7e-10 Identities = 34/86 (39%), Positives = 49/86 (56%) Frame = +1 Query: 256 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVK 435 A+ QD EVGDGTTSVVI+A E+L+R V+ +HP +I R A R E +K Sbjct: 84 AQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIR---EAVKFMTDV 140 Query: 436 IDISR*RNQRDLLLKCASTAMSFEMI 513 + S ++ L+ A T+MS ++I Sbjct: 141 LSCSVDSLGKESLINVAKTSMSSKII 166 >SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit Cct5|Schizosaccharomyces pombe|chr 1|||Manual Length = 546 Score = 62.1 bits (144), Expect = 7e-11 Identities = 28/73 (38%), Positives = 48/73 (65%) Frame = +2 Query: 38 REGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLL 217 +E + G + S+I A + V + VRT+LGPRG+DK+++ +G+ ++NDGATI+ + Sbjct: 24 QEKKRRLHGIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQM 83 Query: 218 DIIHPAAKTLVDM 256 ++ H AK LV + Sbjct: 84 EVEHQIAKLLVQL 96 Score = 54.8 bits (126), Expect = 1e-08 Identities = 27/86 (31%), Positives = 53/86 (61%) Frame = +1 Query: 256 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVK 435 +KSQD E+GDGTT VV+LAG +L++ + +++G+HP + A ++A++ + + Sbjct: 97 SKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAVKHLDAISDV 156 Query: 436 IDISR*RNQRDLLLKCASTAMSFEMI 513 +D S N + L + A T++ +++ Sbjct: 157 VDFSP-ENTTN-LFRSAKTSLGSKVV 180 >SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit Cct2|Schizosaccharomyces pombe|chr 1|||Manual Length = 527 Score = 57.2 bits (132), Expect = 2e-09 Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 1/80 (1%) Frame = +2 Query: 32 LLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDH-NGKAVISNDGATIM 208 + E Q +G+ +S+ V D V++TLGP+GMDK++ + +G V++NDGATI+ Sbjct: 8 IFNESGIQERGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATIL 67 Query: 209 KLLDIIHPAAKTLVDMQSLK 268 K + + + AAK LV++ ++ Sbjct: 68 KSIALDNAAAKVLVNISKVQ 87 Score = 56.4 bits (130), Expect = 4e-09 Identities = 31/88 (35%), Positives = 52/88 (59%) Frame = +1 Query: 256 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVK 435 +K QD EVGDGTTSV + A E+L++ + V +HP+V+I R A++ AI+ ++ ++ Sbjct: 84 SKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATKTAIDALRASSID 143 Query: 436 IDISR*RNQRDLLLKCASTAMSFEMIHQ 519 + S R L A T +S +++ Q Sbjct: 144 -NSSDPAKFRSDLENIARTTLSSKILSQ 170 >SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit Cct6|Schizosaccharomyces pombe|chr 2|||Manual Length = 535 Score = 51.6 bits (118), Expect = 1e-07 Identities = 27/82 (32%), Positives = 45/82 (54%) Frame = +1 Query: 256 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVK 435 A +QD GDGTTSV +L GE+LK+ + ++ EG+HP ++ A A+ + Sbjct: 79 ATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAKNEALTFLDSFKTD 138 Query: 436 IDISR*RNQRDLLLKCASTAMS 501 ++ R++LL A T++S Sbjct: 139 FEV-----DREVLLNVAKTSLS 155 Score = 40.3 bits (90), Expect = 3e-04 Identities = 21/72 (29%), Positives = 36/72 (50%) Frame = +2 Query: 32 LLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMK 211 LL + Q L NI+A + D +++ LGP G K++VD G ++ DG ++ Sbjct: 4 LLNPKAESIQRAQALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLT 63 Query: 212 LLDIIHPAAKTL 247 + I +P A + Sbjct: 64 EMQIQNPTASCI 75 >SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60|Schizosaccharomyces pombe|chr 1|||Manual Length = 582 Score = 30.3 bits (65), Expect = 0.28 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = +2 Query: 113 AVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDI 223 AV TLGP+G + LI G I+ DG T+ + + + Sbjct: 57 AVSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSL 93 Score = 28.3 bits (60), Expect = 1.1 Identities = 20/64 (31%), Positives = 29/64 (45%) Frame = +1 Query: 256 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVK 435 A + GDGTT+ +L I V G +P L R ++ A +E + QA K Sbjct: 109 ASKTNEVAGDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVDNVVEFL--QANK 166 Query: 436 IDIS 447 DI+ Sbjct: 167 RDIT 170 >SPBC1685.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual Length = 325 Score = 25.8 bits (54), Expect = 6.0 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +1 Query: 445 SR*RNQRDLLLKCASTAMSFEMIHQPEGITSLK 543 SR +Q D+L + ST S +H+ E I++LK Sbjct: 110 SRWDSQTDILSQIESTKASLAEVHKAEEISNLK 142 >SPAC11D3.07c |||transcription factor|Schizosaccharomyces pombe|chr 1|||Manual Length = 603 Score = 25.4 bits (53), Expect = 7.9 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = -2 Query: 169 IVIYNQLVHTTGTQGGSDRIDNKL 98 ++I+N LVH T T+ S+ + N L Sbjct: 503 LIIFNNLVHETDTETDSETLLNDL 526 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,910,138 Number of Sequences: 5004 Number of extensions: 60589 Number of successful extensions: 170 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 155 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 169 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 323158234 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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