Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0472.Seq
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086) 134 5e-32
SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 63 2e-10
SB_4934| Best HMM Match : NAD_binding_2 (HMM E-Value=4.8) 62 3e-10
SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 61 1e-09
SB_25097| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 1e-09
SB_25096| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 1e-09
SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 7e-09
SB_57454| Best HMM Match : DUF924 (HMM E-Value=1) 57 2e-08
SB_56262| Best HMM Match : Cpn60_TCP1 (HMM E-Value=6.6e-15) 36 0.024
SB_49248| Best HMM Match : Cpn60_TCP1 (HMM E-Value=1.6) 35 0.055
SB_3351| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_29096| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_46604| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_27780| Best HMM Match : Flavi_NS2A (HMM E-Value=1.3) 31 1.2
SB_6378| Best HMM Match : Keratin_B2 (HMM E-Value=0.1) 30 1.6
SB_3214| Best HMM Match : Keratin_B2 (HMM E-Value=0.096) 30 1.6
SB_49862| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_48461| Best HMM Match : zf-CCHC (HMM E-Value=0.0016) 29 3.6
SB_41690| Best HMM Match : DSL (HMM E-Value=0) 28 6.3
SB_31535| Best HMM Match : Oxysterol_BP (HMM E-Value=1.6e-08) 28 6.3
SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23) 28 8.4
SB_41314| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_34182| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086)
Length = 724
Score = 134 bits (325), Expect = 5e-32
Identities = 63/84 (75%), Positives = 73/84 (86%)
Frame = +2
Query: 5 SSKMQPQILLLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVI 184
+S QP I+LL+EGTD +QG PQL+SNI+ACQ + DAVRTTLGPRGMDKLIVD GKA I
Sbjct: 634 ASGPQPGIILLKEGTDASQGIPQLISNIDACQFIADAVRTTLGPRGMDKLIVDGRGKATI 693
Query: 185 SNDGATIMKLLDIIHPAAKTLVDM 256
SNDGATI+ LLDI+HPAAKTLVD+
Sbjct: 694 SNDGATIINLLDIVHPAAKTLVDI 717
>SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 531
Score = 63.3 bits (147), Expect = 2e-10
Identities = 29/83 (34%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Frame = +2
Query: 26 ILLLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVD--HNGKAVISNDGA 199
+ +L +G ++ + + +S+ + D V++TLGP+GMDK++ NG ++NDGA
Sbjct: 6 VSILNQGAEEERAETARLSSFVGAIAIGDLVKSTLGPKGMDKILQSFGQNGNIQVTNDGA 65
Query: 200 TIMKLLDIIHPAAKTLVDMQSLK 268
TI+K + I +PAAK LV++ ++
Sbjct: 66 TILKSIGIDNPAAKILVELSKVQ 88
Score = 53.6 bits (123), Expect = 1e-07
Identities = 32/88 (36%), Positives = 48/88 (54%)
Frame = +1
Query: 256 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVK 435
+K QD EVGDGTTSV +L E+LK + V +HP+ ++ R + + A EK E A
Sbjct: 85 SKVQDDEVGDGTTSVTVLTSELLKEAEKLVSCKIHPQTIVAGWRKSVK-AAEKALEAAAV 143
Query: 436 IDISR*RNQRDLLLKCASTAMSFEMIHQ 519
S R+ L+ A T +S +++ Q
Sbjct: 144 DHSSDPEKFREDLMNIARTTLSSKILVQ 171
>SB_4934| Best HMM Match : NAD_binding_2 (HMM E-Value=4.8)
Length = 186
Score = 62.5 bits (145), Expect = 3e-10
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
Frame = +2
Query: 65 KPQLV--SNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIH--- 229
KPQ + +NI A + V DA+RT+LGP+GMDK+I NG I+NDGATI KL+D +
Sbjct: 21 KPQEIRMTNITAAKAVADAIRTSLGPKGMDKMIQGGNGDVTITNDGATI-KLIDTVDLEG 79
Query: 230 -PAAKTLVDMQSLKMP 274
P K +V + P
Sbjct: 80 GPVGKPVVPAALMNRP 95
>SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 505
Score = 60.9 bits (141), Expect = 1e-09
Identities = 24/59 (40%), Positives = 44/59 (74%)
Frame = +2
Query: 80 SNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDM 256
S+I A + V ++T+LGP+GMDK++V +G+ ++NDGATI+ ++++ H AK +V++
Sbjct: 34 SHILAARAVASILKTSLGPKGMDKMMVSPDGEVTVTNDGATILGMMEVDHQIAKLMVEL 92
Score = 56.8 bits (131), Expect = 2e-08
Identities = 28/92 (30%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Frame = +1
Query: 256 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVK 435
+KSQD E+GDGTT VV+LAG +L+ + ++ G+HP + A+++A+E + A
Sbjct: 93 SKSQDNEIGDGTTGVVVLAGALLEHAEQLLDWGIHPIRIADGYELAAKIALEHMDSIADN 152
Query: 436 IDISR*RNQRDLLLKCASTAMSFEMI---HQP 522
+ ++ ++ L++ A T + +++ H+P
Sbjct: 153 FPVD--KDNKESLIQTAMTTLGSKIVSRCHRP 182
>SB_25097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/57 (49%), Positives = 41/57 (71%)
Frame = +1
Query: 256 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQ 426
+++QD EVGDGTTSV+ILAGE + +PF+E+ +HP +I A R A I+ +K+Q
Sbjct: 26 SRTQDEEVGDGTTSVIILAGEFMSVAEPFLEQQMHPTQIIAAYRLAMDDMIDILKQQ 82
Score = 29.1 bits (62), Expect = 3.6
Identities = 9/25 (36%), Positives = 20/25 (80%)
Frame = +2
Query: 182 ISNDGATIMKLLDIIHPAAKTLVDM 256
++NDG I++ + + HPAAK+++++
Sbjct: 1 MTNDGNAILREIQVKHPAAKSMIEI 25
>SB_25096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/57 (49%), Positives = 41/57 (71%)
Frame = +1
Query: 256 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQ 426
+++QD EVGDGTTSV+ILAGE + +PF+E+ +HP +I A R A I+ +K+Q
Sbjct: 223 SRTQDEEVGDGTTSVIILAGEFMSVAEPFLEQQMHPTQIIAAYRLAMDDMIDILKQQ 279
>SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 762
Score = 58.0 bits (134), Expect = 7e-09
Identities = 31/81 (38%), Positives = 49/81 (60%)
Frame = +1
Query: 256 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVK 435
A +QD GDGTTS V++ GE+LK+ +V EG+HPR++ A + A+E ++E
Sbjct: 183 ATAQDDITGDGTTSNVMIIGELLKQADLYVSEGLHPRLVTEGFEVAKKKALEVLEE---- 238
Query: 436 IDISR*RNQRDLLLKCASTAM 498
+ +SR RD L+ A T++
Sbjct: 239 VKVSR-EMDRDTLINVAKTSL 258
>SB_57454| Best HMM Match : DUF924 (HMM E-Value=1)
Length = 144
Score = 56.8 bits (131), Expect = 2e-08
Identities = 34/88 (38%), Positives = 49/88 (55%)
Frame = +1
Query: 256 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVK 435
+K QD EVGDGTTSV +LA E+LK + V +HP+ ++ R + + A EK E A
Sbjct: 3 SKVQDDEVGDGTTSVTVLASELLKEAEKLVSCKIHPQTIVAGWRKSVK-AAEKALEAAAV 61
Query: 436 IDISR*RNQRDLLLKCASTAMSFEMIHQ 519
S RD L+ A T +S +++ Q
Sbjct: 62 DHSSDPEKFRDDLMNIARTTLSSKILVQ 89
>SB_56262| Best HMM Match : Cpn60_TCP1 (HMM E-Value=6.6e-15)
Length = 563
Score = 36.3 bits (80), Expect = 0.024
Identities = 14/56 (25%), Positives = 32/56 (57%)
Frame = +2
Query: 86 INACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVD 253
+ CQ ++ + GP G+D ++ +G +I+N G+ I++ L + +P + +V+
Sbjct: 6 LQTCQNFERILKKSFGPNGLDVMLRSSSGNILITNSGSMILESLTMGNPTERMIVE 61
>SB_49248| Best HMM Match : Cpn60_TCP1 (HMM E-Value=1.6)
Length = 278
Score = 35.1 bits (77), Expect = 0.055
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 104 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDI 223
+ DAV TLGP+G + +I G I+ DG T+ K +++
Sbjct: 79 LADAVAVTLGPKGKNVIIEQSFGGPKITKDGVTVAKAIEL 118
>SB_3351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 33.1 bits (72), Expect = 0.22
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +1
Query: 403 AIEKIKEQAVKIDISR*RNQRDLLLKCASTAMSFEMI-HQPEGITSLKICC*MLSCLWTF 579
AI++IKE AV + + R LL +CA+TA+S ++I Q E + + M+
Sbjct: 1 AIKRIKELAVHVKKNDAGEMRQLLERCAATALSSKLIATQKEFFAKMVVDAVMM----LD 56
Query: 580 HFXPLRT*FGIKKVXGGS 633
PL G+KKV GG+
Sbjct: 57 ELLPLDM-IGMKKVSGGA 73
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/23 (65%), Positives = 15/23 (65%)
Frame = +2
Query: 629 GALEDSFPGFPEXAFKKTFSYVG 697
GALEDS AFKKTFSY G
Sbjct: 72 GALEDSML-IEGVAFKKTFSYAG 93
>SB_29096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 31.1 bits (67), Expect = 0.90
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +1
Query: 313 GEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQ 426
GE + +PF+E+ +HP +I A R A I+ +K+Q
Sbjct: 2 GEFMSVAEPFLEQQMHPTQIIAAYRLAMDDMIDILKQQ 39
>SB_46604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 517
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/64 (31%), Positives = 36/64 (56%)
Frame = +2
Query: 104 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDMQSLKMPRLA 283
+V V TLG + L+V N K ++S T+ K+L +++P KT+V + SL + ++
Sbjct: 381 IVSIVSLTLGK--VKVLLVYPNKKTIVSIVSLTLGKVL-LVYPNKKTIVSIVSLTLGKVL 437
Query: 284 MEPP 295
+ P
Sbjct: 438 LVYP 441
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/80 (28%), Positives = 42/80 (52%)
Frame = +2
Query: 56 TQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHPA 235
T GK +++ + +V V TLG L+V N K ++S T+ K+L +++P
Sbjct: 388 TLGKVKVLLVYPNKKTIVSIVSLTLGK----VLLVYPNKKTIVSIVSLTLGKVL-LVYPN 442
Query: 236 AKTLVDMQSLKMPRLAMEPP 295
KT+V + SL + ++ + P
Sbjct: 443 KKTIVSIVSLTLGKVLLMYP 462
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/64 (31%), Positives = 35/64 (54%)
Frame = +2
Query: 104 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDMQSLKMPRLA 283
+V V TLG L+V N K ++S T+ K+L +++P KT+V + SL + ++
Sbjct: 213 IVSIVSLTLGK----VLLVYPNKKTIVSIVSLTLGKVL-LVYPNKKTIVSIVSLTLGKVL 267
Query: 284 MEPP 295
+ P
Sbjct: 268 LVYP 271
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/64 (31%), Positives = 35/64 (54%)
Frame = +2
Query: 104 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDMQSLKMPRLA 283
+V V TLG L+V N K ++S T+ K+L +++P KT+V + SL + ++
Sbjct: 234 IVSIVSLTLGK----VLLVYPNKKTIVSIVSLTLGKVL-LVYPNKKTIVSIVSLTLGKVL 288
Query: 284 MEPP 295
+ P
Sbjct: 289 LVYP 292
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/64 (31%), Positives = 35/64 (54%)
Frame = +2
Query: 104 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDMQSLKMPRLA 283
+V V TLG L+V N K ++S T+ K+L +++P KT+V + SL + ++
Sbjct: 255 IVSIVSLTLGK----VLLVYPNKKTIVSIVSLTLGKVL-LVYPNKKTIVSIVSLTLGKVL 309
Query: 284 MEPP 295
+ P
Sbjct: 310 LMYP 313
>SB_27780| Best HMM Match : Flavi_NS2A (HMM E-Value=1.3)
Length = 400
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/64 (31%), Positives = 36/64 (56%)
Frame = +2
Query: 104 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDMQSLKMPRLA 283
+V V TLG + L+V N K ++S T+ K+L +++P KT+V + SL + ++
Sbjct: 107 IVSIVSLTLGK--VKVLLVYPNKKTIVSIVSLTLGKVL-LVYPNKKTIVSIVSLTLGKVL 163
Query: 284 MEPP 295
+ P
Sbjct: 164 LVYP 167
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/80 (28%), Positives = 42/80 (52%)
Frame = +2
Query: 56 TQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHPA 235
T GK +++ + +V V TLG L+V N K ++S T+ K+L +++P
Sbjct: 114 TLGKVKVLLVYPNKKTIVSIVSLTLGK----VLLVYPNKKTIVSIVSLTLGKVL-LVYPN 168
Query: 236 AKTLVDMQSLKMPRLAMEPP 295
KT+V + SL + ++ + P
Sbjct: 169 KKTIVSIVSLTLGKVLLVYP 188
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/64 (31%), Positives = 35/64 (54%)
Frame = +2
Query: 104 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDMQSLKMPRLA 283
+V V TLG L+V N K ++S T+ K+L +++P KT+V + SL + ++
Sbjct: 151 IVSIVSLTLGK----VLLVYPNKKTIVSIVSLTLGKVL-LVYPNKKTIVSIVSLTLGKVL 205
Query: 284 MEPP 295
+ P
Sbjct: 206 LVYP 209
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/64 (31%), Positives = 35/64 (54%)
Frame = +2
Query: 104 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDMQSLKMPRLA 283
+V V TLG L+V N K ++S T+ K+L +++P KT+V + SL + ++
Sbjct: 172 IVSIVSLTLGK----VLLVYPNKKTIVSIVSLTLGKVL-LVYPNKKTIVSIVSLTLGKVL 226
Query: 284 MEPP 295
+ P
Sbjct: 227 LMYP 230
>SB_6378| Best HMM Match : Keratin_B2 (HMM E-Value=0.1)
Length = 269
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +1
Query: 88 QCLSTCCRCGQNHPGSPWYGQADCRSQWKGGYIKRWCNDHEATGYHSPCR*NSC 249
QC + C+ G++ GSP +ADC GG ++ C H + C SC
Sbjct: 145 QCCRSVCKVGRDCVGSPCSSRADC-----GGPFEQSCCGHRCV-FGKSCYGRSC 192
>SB_3214| Best HMM Match : Keratin_B2 (HMM E-Value=0.096)
Length = 191
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +1
Query: 88 QCLSTCCRCGQNHPGSPWYGQADCRSQWKGGYIKRWCNDHEATGYHSPCR*NSC 249
QC + C+ G++ GSP +ADC GG ++ C H + C SC
Sbjct: 67 QCCRSVCKVGRDCVGSPCSSRADC-----GGPFEQSCCGHRCV-FGKSCYGRSC 114
>SB_49862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +3
Query: 498 VIRNDSSTRRDHFSKDLLLNAVLSLDIPLLXSSNMIWNQEGXRWELLKIRF 650
++ N RR+ + L++++ + ++ L N +WN E W+L I +
Sbjct: 485 LLENIRELRRELQRQVLIIDSFIPVEFQELVEQNKLWNDEIGEWQLRYIAY 535
>SB_48461| Best HMM Match : zf-CCHC (HMM E-Value=0.0016)
Length = 327
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 103 CCRCGQNHPGSPW-YGQADCRSQWKGGYIKRWC 198
C RCG+NHP S + +A C K G+I C
Sbjct: 92 CYRCGKNHPPSKCRFKEATCHYCKKKGHIVAKC 124
>SB_41690| Best HMM Match : DSL (HMM E-Value=0)
Length = 2798
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/30 (33%), Positives = 12/30 (40%)
Frame = +1
Query: 145 GQADCRSQWKGGYIKRWCNDHEATGYHSPC 234
G DC W GG +C H + H C
Sbjct: 1128 GSKDCHDGWYGGTCSIYCLPHNGSSGHYDC 1157
>SB_31535| Best HMM Match : Oxysterol_BP (HMM E-Value=1.6e-08)
Length = 836
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = -2
Query: 340 TASTSSEFHRPISLPRWFHRQPRHLETLHIHKSFSGRVNDI 218
++ TS E H P++L HR P H + ++ SF+ ++N++
Sbjct: 378 SSETSLELHSPVTLWTCSHRPP-HSKEMYNFTSFAMQLNEL 417
>SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23)
Length = 300
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 91 CLSTCCRCGQNHPGSPWYGQADCRSQWKGGYIKRWC 198
C TC C N SP+ GQ +C S + G ++ C
Sbjct: 142 CQGTC-DCKNNATCSPFTGQCNCTSGFTGDRCEKQC 176
>SB_41314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1388
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 73 ARLQHQCLSTCCRCGQNHPGSPWYGQADCRSQWKGGYIKRWCNDHEAT 216
+RLQH+C++ C CG++ SP + +W Y CN + T
Sbjct: 412 SRLQHKCVNLCYGCGES-DCSPLVPPPEQDHRWDWKYCPE-CNRYFRT 457
>SB_34182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 65 KPQLVSNINACQLVVDAVRTTLGPRGMD 148
K L+S I C LV +A +T+G +G D
Sbjct: 26 KKDLISEIRHCYLVSNAYPSTVGAKGFD 53
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,912,879
Number of Sequences: 59808
Number of extensions: 463746
Number of successful extensions: 1318
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1317
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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