Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0472.Seq
         (698 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    23   2.8  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   2.8  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   3.7  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   8.5  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   8.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   8.5  

>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 348 FNKRLQPLQNFTGQYHYRGG 289
           +NK ++P+QN T + H   G
Sbjct: 38  YNKLIRPVQNMTEKVHVNFG 57


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
 Frame = +1

Query: 373 IRAVRTASRLAIEKIKEQAVKI-----DISR*RNQRDLLLKCASTAMSFEMIHQP 522
           +R ++   R+  EKI E    +     +I   R+  D  L+CAS  ++FE    P
Sbjct: 4   LRELQELLRVKDEKIVELEALLCRRDAEIQELRSHLDKFLQCASLKLAFEPRRNP 58


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/53 (22%), Positives = 25/53 (47%)
 Frame = -2

Query: 256 HIHKSFSGRVNDIQ*LHDRCTIV*YNRLSIVIYNQLVHTTGTQGGSDRIDNKL 98
           H+ ++ S    D+Q L +  T + +N     I +  ++   T+G +  +  KL
Sbjct: 272 HLFRTASSTPEDLQDLEEPLTTIQHNNCLTRIPSTRINKQHTRGNNFSLSRKL 324


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 443 ISIFTACSLIFSMASLDAVLTALIRT 366
           I+ +T C L      L + LTA ++T
Sbjct: 793 ITKYTGCELTSESMPLQSALTAAVQT 818


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/24 (37%), Positives = 10/24 (41%)
 Frame = -1

Query: 650 ETNLQELPPXTFLIPNHVRRGQKW 579
           E   Q L     L+PNH     KW
Sbjct: 106 EAKKQNLKVILDLVPNHTSDQHKW 129


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 443 ISIFTACSLIFSMASLDAVLTALIRT 366
           I+ +T C L      L + LTA ++T
Sbjct: 883 ITKYTGCELTSESMPLQSALTAAVQT 908


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,781
Number of Sequences: 438
Number of extensions: 3853
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)