Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0472.Seq
(698 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g11830.1 68416.m01450 chaperonin, putative similar to SWISS-P... 133 1e-31
At3g20050.1 68416.m02536 T-complex protein 1 alpha subunit / TCP... 79 3e-15
At3g18190.1 68416.m02314 chaperonin, putative similar to SWISS-P... 76 2e-14
At5g26360.1 68418.m03151 chaperonin, putative similar to SWISS-P... 73 2e-13
At3g03960.1 68416.m00415 chaperonin, putative similar to SWISS-P... 69 3e-12
At5g20890.1 68418.m02481 chaperonin, putative similar to SWISS-P... 60 1e-09
At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit, pu... 60 1e-09
At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit, pu... 60 1e-09
At5g16070.1 68418.m01878 chaperonin, putative similar to SWISS-P... 52 5e-07
At3g02530.1 68416.m00241 chaperonin, putative similar to SWISS-P... 52 5e-07
At5g18820.1 68418.m02236 chaperonin, putative similar to SWISS-P... 40 0.002
At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha s... 35 0.060
At1g55490.2 68414.m06348 RuBisCO subunit binding-protein beta su... 34 0.079
At1g55490.1 68414.m06347 RuBisCO subunit binding-protein beta su... 34 0.079
At5g56500.1 68418.m07051 chaperonin, putative similar to SWISS-P... 34 0.10
At2g33210.1 68415.m04069 chaperonin, putative similar to SWISS-P... 34 0.10
At3g23990.1 68416.m03013 chaperonin (CPN60) (HSP60) identical to... 33 0.14
At3g13860.1 68416.m01751 chaperonin, putative similar to SWISS-P... 33 0.14
At3g13470.1 68416.m01695 chaperonin, putative similar SWISS-PROT... 33 0.18
At1g26230.1 68414.m03200 chaperonin, putative similar to SWISS-P... 33 0.24
At1g67760.1 68414.m07732 T-complex protein 1 epsilon subunit, pu... 30 1.3
At5g37060.1 68418.m04448 cation/hydrogen exchanger, putative (CH... 29 3.9
At1g16560.3 68414.m01985 Per1-like family protein contains Pfam ... 28 6.8
At1g16560.2 68414.m01984 Per1-like family protein contains Pfam ... 28 6.8
At1g16560.1 68414.m01983 Per1-like family protein contains Pfam ... 28 6.8
At5g45560.1 68418.m05595 pleckstrin homology (PH) domain-contain... 27 9.0
At3g55830.1 68416.m06203 glycosyltransferase family protein 47 s... 27 9.0
>At3g11830.1 68416.m01450 chaperonin, putative similar to
SWISS-PROT:P80313 T-complex protein 1, eta subunit
(TCP-1-eta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 557
Score = 133 bits (321), Expect = 1e-31
Identities = 64/84 (76%), Positives = 70/84 (83%)
Frame = +2
Query: 5 SSKMQPQILLLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVI 184
+S MQPQI+LL+EGTD +QGK QLVSNINAC V D VRTTLGPRGMDKLI D G I
Sbjct: 2 ASMMQPQIILLKEGTDTSQGKAQLVSNINACTAVGDVVRTTLGPRGMDKLIHDDKGSVTI 61
Query: 185 SNDGATIMKLLDIIHPAAKTLVDM 256
SNDGATIMKLLDI+HPAAK LVD+
Sbjct: 62 SNDGATIMKLLDIVHPAAKILVDI 85
Score = 101 bits (243), Expect = 3e-22
Identities = 50/86 (58%), Positives = 65/86 (75%)
Frame = +1
Query: 256 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVK 435
AKSQD+EVGDGTT+VV+LA E LK KPF+E+GVH + LIR+ RTAS LAI K+KE AV
Sbjct: 86 AKSQDSEVGDGTTTVVLLAAEFLKEAKPFIEDGVHAQNLIRSYRTASTLAIAKVKELAVS 145
Query: 436 IDISR*RNQRDLLLKCASTAMSFEMI 513
I+ ++ LL KCA+T +S ++I
Sbjct: 146 IEGKSVEEKKGLLAKCAATTLSSKLI 171
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 614 RRXPVGALEDSFPGFPEXAFKKTFSYVG 697
++ P G + DSF AFKKTFSY G
Sbjct: 201 KKVPGGNMRDSFL-VDGVAFKKTFSYAG 227
>At3g20050.1 68416.m02536 T-complex protein 1 alpha subunit /
TCP-1-alpha / chaperonin (CCT1) identical to
SWISS-PROT:P28769- T-complex protein 1, alpha subunit
(TCP-1-alpha) [Arabidopsis thaliana]
Length = 545
Score = 79.0 bits (186), Expect = 3e-15
Identities = 34/73 (46%), Positives = 52/73 (71%)
Frame = +2
Query: 50 DQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIH 229
D+ G+ N+ ACQ V + V+T+LGP G+DK++VD G I+NDGATI+++L++ H
Sbjct: 13 DRQSGQDVRTQNVMACQAVSNIVKTSLGPVGLDKMLVDDIGDVTITNDGATILRMLEVEH 72
Query: 230 PAAKTLVDMQSLK 268
PAAK LV++ L+
Sbjct: 73 PAAKVLVELAELQ 85
Score = 63.3 bits (147), Expect = 1e-10
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAV- 432
A+ QD EVGDGTTSVVI+A E+LKR V +HP +I R A R + + I+E+ V
Sbjct: 82 AELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMRESCKYIEEKLVT 141
Query: 433 KIDISR*RNQRDLLLKCASTAMSFEMI 513
K++ + + L+ CA T+MS ++I
Sbjct: 142 KVE----KLGKVPLINCAKTSMSSKLI 164
>At3g18190.1 68416.m02314 chaperonin, putative similar to
SWISS-PROT:P50991- T-complex protein 1, delta subunit
(TCP-1-delta) [Homo sapiens]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 536
Score = 76.2 bits (179), Expect = 2e-14
Identities = 32/59 (54%), Positives = 48/59 (81%)
Frame = +2
Query: 80 SNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDM 256
+NIN+ + V DAVRT+LGP+GMDK+I NG+ +I+NDGATI+ ++++ PAAK LV++
Sbjct: 32 ANINSARAVSDAVRTSLGPKGMDKMISTANGEVIITNDGATILNKMEVLQPAAKMLVEL 90
Score = 66.1 bits (154), Expect = 2e-11
Identities = 32/88 (36%), Positives = 57/88 (64%)
Frame = +1
Query: 256 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVK 435
+KSQD+ GDGTT+VV++AG +LK + + G+HP V+ ++ A AI+ + AV
Sbjct: 91 SKSQDSAAGDGTTTVVVIAGALLKECQSLLTNGIHPTVISDSLHKACGKAIDILTAMAVP 150
Query: 436 IDISR*RNQRDLLLKCASTAMSFEMIHQ 519
++++ RD L+K AST+++ +++ Q
Sbjct: 151 VELT----DRDSLVKSASTSLNSKVVSQ 174
>At5g26360.1 68418.m03151 chaperonin, putative similar to
SWISS-PROT:P50143- T-complex protein 1, gamma subunit
(TCP-1-gamma) [Xenopus laevis]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 555
Score = 72.5 bits (170), Expect = 2e-13
Identities = 32/81 (39%), Positives = 51/81 (62%)
Frame = +2
Query: 14 MQPQILLLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISND 193
M +L+L + + G NI A + V D +RTTLGPR M K+++D G V++ND
Sbjct: 1 MHAPVLVLSDSLKRESGSKVHHGNIQASKAVADIIRTTLGPRSMLKMLLDAGGGIVVTND 60
Query: 194 GATIMKLLDIIHPAAKTLVDM 256
G I++ LD+ HPAAK+++++
Sbjct: 61 GNAILRELDVAHPAAKSMIEL 81
Score = 61.3 bits (142), Expect = 6e-10
Identities = 32/79 (40%), Positives = 48/79 (60%)
Frame = +1
Query: 256 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVK 435
+++QD EVGDGTTSV++LAGE+L + F+E+ HP V+ RA A +I + + A+
Sbjct: 82 SRTQDEEVGDGTTSVIVLAGEMLHVAEAFLEKNYHPTVICRAYIKALEDSIAVLDKIAMS 141
Query: 436 IDISR*RNQRDLLLKCAST 492
IDI+ L+ C T
Sbjct: 142 IDINDRSQVLGLVKSCIGT 160
>At3g03960.1 68416.m00415 chaperonin, putative similar to
SWISS-PROT:P42932- T-complex protein 1, theta subunit
(TCP-1-theta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 549
Score = 68.9 bits (161), Expect = 3e-12
Identities = 35/82 (42%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Frame = +2
Query: 14 MQPQIL--LLREGTDQTQGKPQ-LVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVI 184
MQP + +L+EG G + ++ NI AC+ + RT+LGP GM+K++++H K +
Sbjct: 6 MQPYGIQSMLKEGYRHLSGLDEAVIKNIEACKELSTITRTSLGPNGMNKMVINHLDKLFV 65
Query: 185 SNDGATIMKLLDIIHPAAKTLV 250
+ND ATI+ L+I HPAAK LV
Sbjct: 66 TNDAATIVNELEIQHPAAKLLV 87
Score = 44.4 bits (100), Expect = 7e-05
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Frame = +1
Query: 256 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVK 435
AK+Q E+GDG + AGE+L+ + + G+HP +I A A+E I EQ V+
Sbjct: 90 AKAQQEEIGDGANLTISFAGELLQNAEELIRMGLHPSEIISGYTKAVSKAVE-ILEQLVE 148
Query: 436 I--DISR*RNQRDLLLKCASTAMSFEMIHQPEGITSL 540
+ RN +D ++ A++ + Q E I SL
Sbjct: 149 TGSETMDVRN-KDEVISRMRAAVASKQFGQEEIICSL 184
>At5g20890.1 68418.m02481 chaperonin, putative similar to
SWISS-PROT:P78371- T-complex protein 1, beta subunit
(TCP-1-beta) [Homo sapiens]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 527
Score = 60.5 bits (140), Expect = 1e-09
Identities = 30/81 (37%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Frame = +2
Query: 32 LLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHN-GKAV-ISNDGATI 205
+ ++ + +G+ +++ + D V++TLGP+GMDK++ G AV ++NDGATI
Sbjct: 6 IFKDDASEEKGERARMASFVGAMAISDLVKSTLGPKGMDKILQSTGRGHAVTVTNDGATI 65
Query: 206 MKLLDIIHPAAKTLVDMQSLK 268
+K L I +PAAK LVD+ ++
Sbjct: 66 LKSLHIDNPAAKVLVDISKVQ 86
Score = 59.7 bits (138), Expect = 2e-09
Identities = 33/88 (37%), Positives = 51/88 (57%)
Frame = +1
Query: 256 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVK 435
+K QD EVGDGTTSVV+LAGE+L+ + V +HP +I R AS A + ++ +
Sbjct: 83 SKVQDDEVGDGTTSVVVLAGELLREAEKLVASKIHPMTIIAGYRMASECARNALLKRVID 142
Query: 436 IDISR*RNQRDLLLKCASTAMSFEMIHQ 519
+ + + D LLK A T + +++ Q
Sbjct: 143 NKDNAEKFRSD-LLKIAMTTLCSKILSQ 169
>At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative identical to SWISS-PROT:O04450- T-complex
protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
thaliana]; strong similarity to SP|P54411 T-complex
protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
(TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
TCP-1/cpn60 chaperonin family
Length = 459
Score = 60.1 bits (139), Expect = 1e-09
Identities = 29/82 (35%), Positives = 49/82 (59%)
Frame = +1
Query: 256 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVK 435
++SQD E+GDGTT VV++AG +L++ + ++ G+HP + ASR+A+E ++ A K
Sbjct: 15 SRSQDYEIGDGTTGVVVMAGALLEQAERQLDRGIHPIRIAEGYEMASRVAVEHLERIAQK 74
Query: 436 IDISR*RNQRDLLLKCASTAMS 501
+ N L+ C +T S
Sbjct: 75 FEFDV-NNYEPLVQTCMTTLSS 95
>At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative identical to SWISS-PROT:O04450- T-complex
protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
thaliana]; strong similarity to SP|P54411 T-complex
protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
(TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
TCP-1/cpn60 chaperonin family
Length = 535
Score = 60.1 bits (139), Expect = 1e-09
Identities = 29/82 (35%), Positives = 49/82 (59%)
Frame = +1
Query: 256 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVK 435
++SQD E+GDGTT VV++AG +L++ + ++ G+HP + ASR+A+E ++ A K
Sbjct: 91 SRSQDYEIGDGTTGVVVMAGALLEQAERQLDRGIHPIRIAEGYEMASRVAVEHLERIAQK 150
Query: 436 IDISR*RNQRDLLLKCASTAMS 501
+ N L+ C +T S
Sbjct: 151 FEFDV-NNYEPLVQTCMTTLSS 171
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/78 (37%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Frame = +2
Query: 29 LLLREGTDQTQ--GKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGAT 202
++LRE +T+ G +NI A + V +R++LGP+GMDK++ +G I+NDGAT
Sbjct: 13 IILREQDQKTRLRGIDAQKANIAAGKAVARILRSSLGPKGMDKMLQGPDGDITITNDGAT 72
Query: 203 IMKLLDIIHPAAKTLVDM 256
I++ +D+ + AK +V++
Sbjct: 73 ILEQMDVDNQIAKLMVEL 90
>At5g16070.1 68418.m01878 chaperonin, putative similar to
SWISS-PROT:P80317 T-complex protein 1, zeta subunit
(TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 535
Score = 51.6 bits (118), Expect = 5e-07
Identities = 23/52 (44%), Positives = 34/52 (65%)
Frame = +1
Query: 256 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIE 411
A +QD GDGTTS VI GE++K+ + ++EG+HPRVL+ A R ++
Sbjct: 80 AVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQ 131
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/51 (35%), Positives = 33/51 (64%)
Frame = +2
Query: 86 INACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHPAA 238
INA + + D +++ LGP+G K++V +G ++ DG T++K + I +P A
Sbjct: 23 INAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGNTLLKEMQIQNPTA 73
>At3g02530.1 68416.m00241 chaperonin, putative similar to
SWISS-PROT:P80317- T-complex protein 1, zeta subunit
(TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 535
Score = 51.6 bits (118), Expect = 5e-07
Identities = 23/52 (44%), Positives = 34/52 (65%)
Frame = +1
Query: 256 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIE 411
A +QD GDGTTS VI GE++K+ + ++EG+HPRVL+ A R ++
Sbjct: 80 AVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQ 131
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/51 (35%), Positives = 33/51 (64%)
Frame = +2
Query: 86 INACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHPAA 238
INA + + D +++ LGP+G K++V +G ++ DG T++K + I +P A
Sbjct: 23 INAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGNTLLKEMQIQNPTA 73
>At5g18820.1 68418.m02236 chaperonin, putative similar to
SWISS-PROT:P08926- RuBisCO subunit binding-protein alpha
subunit, chloroplast precursor (60 kDa chaperonin alpha
subunit, CPN-60 alpha)[Pisum sativum]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 575
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +2
Query: 104 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMK---LLDIIHPAAKTLVDMQSLKM 271
+ DAV TLGPRG + ++ + + VI NDG TI K L D I A TL+ ++KM
Sbjct: 55 LADAVSITLGPRGRNVVLAEKDTIKVI-NDGVTIAKSIELPDTIENAGATLIQEVAIKM 112
>At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha
subunit, chloroplast / 60 kDa chaperonin alpha subunit /
CPN-60 alpha identical to SWISS-PROT:P21238- RuBisCO
subunit binding-protein alpha subunit, chloroplast
precursor (60 kDa chaperonin alpha subunit, CPN-60
alpha) [Arabidopsis thaliana]
Length = 586
Score = 34.7 bits (76), Expect = 0.060
Identities = 21/58 (36%), Positives = 34/58 (58%)
Frame = +1
Query: 256 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQA 429
+K+ D+ GDGTT+ ILA EI+K V G +P L R + + IE+++++A
Sbjct: 123 SKTNDS-AGDGTTTASILAREIIKHGLLSVTSGANPVSLKRGIDKTVQGLIEELQKKA 179
Score = 34.3 bits (75), Expect = 0.079
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 104 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDI 223
+ D V TLGPRG + +++D G + NDG TI + +++
Sbjct: 68 LADCVGLTLGPRGRN-VVLDEFGSPKVVNDGVTIARAIEL 106
>At1g55490.2 68414.m06348 RuBisCO subunit binding-protein beta
subunit, chloroplast / 60 kDa chaperonin beta subunit /
CPN-60 beta identical to SWISS-PROT:P21240- RuBisCO
subunit binding-protein beta subunit, chloroplast
precursor (60 kDa chaperonin beta subunit, CPN-60 beta)
[Arabidopsis thaliana]
Length = 600
Score = 34.3 bits (75), Expect = 0.079
Identities = 17/64 (26%), Positives = 35/64 (54%)
Frame = +1
Query: 256 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVK 435
AK+ D GDGTT+ V+LA + V G +P ++ R + ++ + ++K+ + +
Sbjct: 134 AKTNDL-AGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVTELKKMSKE 192
Query: 436 IDIS 447
++ S
Sbjct: 193 VEDS 196
Score = 32.3 bits (70), Expect = 0.32
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 104 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHP 232
+ D V TLGP+G + ++ G I NDG T+ + +++ P
Sbjct: 78 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDP 120
>At1g55490.1 68414.m06347 RuBisCO subunit binding-protein beta
subunit, chloroplast / 60 kDa chaperonin beta subunit /
CPN-60 beta identical to SWISS-PROT:P21240- RuBisCO
subunit binding-protein beta subunit, chloroplast
precursor (60 kDa chaperonin beta subunit, CPN-60 beta)
[Arabidopsis thaliana]
Length = 600
Score = 34.3 bits (75), Expect = 0.079
Identities = 17/64 (26%), Positives = 35/64 (54%)
Frame = +1
Query: 256 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVK 435
AK+ D GDGTT+ V+LA + V G +P ++ R + ++ + ++K+ + +
Sbjct: 134 AKTNDL-AGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVTELKKMSKE 192
Query: 436 IDIS 447
++ S
Sbjct: 193 VEDS 196
Score = 32.3 bits (70), Expect = 0.32
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 104 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHP 232
+ D V TLGP+G + ++ G I NDG T+ + +++ P
Sbjct: 78 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDP 120
>At5g56500.1 68418.m07051 chaperonin, putative similar to
SWISS-PROT:P08927- RuBisCO subunit binding-protein beta
subunit, chloroplast precursor (60 kDa chaperonin beta
subunit, CPN-60 beta) [Pisum sativum]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 597
Score = 33.9 bits (74), Expect = 0.10
Identities = 16/64 (25%), Positives = 36/64 (56%)
Frame = +1
Query: 256 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVK 435
+K+ D GDGTT+ V+LA ++ V G +P ++ R + ++ + ++K+ + +
Sbjct: 130 SKTNDL-AGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTTKALVAELKKMSKE 188
Query: 436 IDIS 447
++ S
Sbjct: 189 VEDS 192
Score = 32.3 bits (70), Expect = 0.32
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 104 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHP 232
+ D V TLGP+G + ++ G I NDG T+ + +++ P
Sbjct: 74 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDP 116
>At2g33210.1 68415.m04069 chaperonin, putative similar to
SWISS-PROT:Q05046- chaperonin CPN60-2, mitochondrial
precursor (HSP60-2) [Cucurbita maxima]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 585
Score = 33.9 bits (74), Expect = 0.10
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 104 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLD 220
+ DAV+ T+GP+G + +I G ++ DG T+ K ++
Sbjct: 54 LADAVKVTMGPKGRNVIIEQSWGAPKVTKDGVTVAKSIE 92
>At3g23990.1 68416.m03013 chaperonin (CPN60) (HSP60) identical to
SWISS-PROT:P29197- chaperonin CPN60, mitochondrial
precursor (HSP60) [Arabidopsis thaliana]
Length = 577
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 104 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLD 220
+ DAV+ T+GP+G + +I G ++ DG T+ K ++
Sbjct: 53 LADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIE 91
>At3g13860.1 68416.m01751 chaperonin, putative similar to
SWISS-PROT:P29197- chaperonin CPN60, mitochondrial
precursor (HSP60) [Arabidopsis thaliana] ; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 572
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 104 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMK 211
V +AV+ T+GP+G + +I G I+ DG T+ K
Sbjct: 53 VAEAVKVTMGPKGRNVIIESSYGGPKITKDGVTVAK 88
>At3g13470.1 68416.m01695 chaperonin, putative similar
SWISS-PROT:P21240- RuBisCO subunit binding-protein beta
subunit, chloroplast precursor (60 kDa chaperonin beta
subunit, CPN-60 beta) [Arabidopsis thaliana]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 596
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/64 (26%), Positives = 34/64 (53%)
Frame = +1
Query: 256 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVK 435
AK+ D GDGTT+ V+LA + V G +P ++ R + ++ + ++K + +
Sbjct: 130 AKTNDL-AGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVNELKLMSKE 188
Query: 436 IDIS 447
++ S
Sbjct: 189 VEDS 192
Score = 32.3 bits (70), Expect = 0.32
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 104 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHP 232
+ D V TLGP+G + ++ G I NDG T+ + +++ P
Sbjct: 74 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDP 116
>At1g26230.1 68414.m03200 chaperonin, putative similar to
SWISS-PROT:P08927- RuBisCO subunit binding-protein beta
subunit, chloroplast precursor (60 kDa chaperonin beta
subunit, CPN-60 beta) [Pisum sativum]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 611
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 101 LVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHP 232
+V + TLGP+G + ++ + G I NDG T++K +++ P
Sbjct: 61 MVAKLLGVTLGPKGRNVVLQNKYGPPRIVNDGETVLKEIELEDP 104
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/62 (24%), Positives = 33/62 (53%)
Frame = +1
Query: 256 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVK 435
AK+ D GDG+T+ +ILA ++ + G +P + R + ++ + ++K + +
Sbjct: 118 AKTNDL-AGDGSTTSIILAHGLITEGIKVISAGTNPIQVARGIEKTTKALVLELKSMSRE 176
Query: 436 ID 441
I+
Sbjct: 177 IE 178
>At1g67760.1 68414.m07732 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative similar to chaperonin containing TCP-1 (CCT)
epsilon subunit [Tetrahymena pyriformis] GI:15824416,
SP|P80316 T-complex protein 1, epsilon subunit
(TCP-1-epsilon) (CCT-epsilon) {Mus musculus}
Length = 142
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = +2
Query: 29 LLLREGTDQTQ--GKPQLVSNINACQLVVDAVRTTLGPRGMDK 151
++LRE +T+ G +NI+A + V +R++LGP+GM+K
Sbjct: 13 IILREQDQKTRLKGIDAQKANISAGKAVARILRSSLGPKGMEK 55
>At5g37060.1 68418.m04448 cation/hydrogen exchanger, putative
(CHX24) similar to Na+/H+-exchanging protein NapA -
Enterococcus hirae, PIR:A42111; monovalent cation:proton
antiporter family 2 (CPA2) member, PMID:11500563
Length = 859
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 486 INSDVIRNDSSTRRDHFSKDLLLNAVLSLDIPLLXSSNMI-WNQEGXRWELL 638
+N+DV+ + + +F K L NAV+ L + L S+N I QE R+ +L
Sbjct: 639 VNADVLEHTPCSVCIYFDKGRLKNAVVRLSMDLQHSTNSIRMRQETYRFVVL 690
>At1g16560.3 68414.m01985 Per1-like family protein contains Pfam
profile PF04080: Per1-like
Length = 342
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +1
Query: 91 CLSTCC--RCGQNHPGSPWYGQADCRSQWK 174
C+ C +C + G PWY Q QWK
Sbjct: 43 CVGQLCFPQCNSSSDGGPWYIQEPLYLQWK 72
>At1g16560.2 68414.m01984 Per1-like family protein contains Pfam
profile PF04080: Per1-like
Length = 342
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +1
Query: 91 CLSTCC--RCGQNHPGSPWYGQADCRSQWK 174
C+ C +C + G PWY Q QWK
Sbjct: 43 CVGQLCFPQCNSSSDGGPWYIQEPLYLQWK 72
>At1g16560.1 68414.m01983 Per1-like family protein contains Pfam
profile PF04080: Per1-like
Length = 342
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +1
Query: 91 CLSTCC--RCGQNHPGSPWYGQADCRSQWK 174
C+ C +C + G PWY Q QWK
Sbjct: 43 CVGQLCFPQCNSSSDGGPWYIQEPLYLQWK 72
>At5g45560.1 68418.m05595 pleckstrin homology (PH) domain-containing
protein / lipid-binding START domain-containing protein
weak similarity to SP|P79245 Steroidogenic acute
regulatory protein, mitochondrial precursor (StAR) {Ovis
aries}; contains Pfam profiles PF01852: START domain,
PF00169: PH domain
Length = 719
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = -2
Query: 619 PS*FQIMFEEXRSGMSKDRTAFNNKSLEK*SLLVDESFRMTSLLMHTSIGD 467
PS Q + E + GM RTA ++ S L DE+ LL T+IG+
Sbjct: 118 PSGQQYVSFEYKPGMDAGRTASSSDHESPFSALEDENDSQRDLLRRTTIGN 168
>At3g55830.1 68416.m06203 glycosyltransferase family protein 47
similar to exostose-related protein 2, Homo sapiens,
PIR:JC5935 [SP|Q93063], EXTL2, Mus musculus
[GI:10443633]
Length = 334
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 450 LKEPKRSPIEVCINSDVIRNDSSTRRDHFSKDLLLNAVLSLD 575
LK+ R EV + D+ + DS R KDL +AV S+D
Sbjct: 125 LKKKTRDGHEVELRFDINKEDSLNNRFKEIKDLKTDAVFSID 166
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,523,912
Number of Sequences: 28952
Number of extensions: 331918
Number of successful extensions: 874
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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