Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0471.Seq
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    28   0.084
AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    25   0.59 
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    24   1.0  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    24   1.0  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 27.9 bits (59), Expect = 0.084
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
 Frame = -2

Query: 493 NFSQFFYGYYIT*YLLCSSSFSL----WFYQ*GAVFA----IIGGFIN*YPLFTGLSLNS 338
           + S+ FYG+ I  +LL    F L    W  + G   A    ++  F+  YPLF  L +++
Sbjct: 109 DLSRTFYGFVIVAHLLFLVIFVLNIWCWIVEIGGWLAFTKQLLIKFVEVYPLFVLLIVSN 168

Query: 337 YILKI 323
            +LKI
Sbjct: 169 VVLKI 173


>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -2

Query: 508 RINRCNFSQFFYGYYIT*YLLCSSSFSL 425
           R N  NFS+F   +Y + +LL SSS  L
Sbjct: 13  RTNGSNFSKFINCHYTSGHLLGSSSLPL 40


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 208 FHEIYESG*SEYRRGIQLNLKNVV 279
           FH IYE+    Y+ GIQ ++ N V
Sbjct: 141 FHLIYEAHGFSYKCGIQYHICNTV 164


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 208 FHEIYESG*SEYRRGIQLNLKNVV 279
           FH IYE+    Y+ GIQ ++ N V
Sbjct: 137 FHLIYEAHGFSYKCGIQYHICNTV 160


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,402
Number of Sequences: 336
Number of extensions: 3041
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)