Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0470.Seq
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16477| Best HMM Match : DnaJ (HMM E-Value=8.1e-33) 49 4e-06
SB_3383| Best HMM Match : DnaJ (HMM E-Value=3.8e-40) 49 4e-06
SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0) 48 6e-06
SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37) 46 2e-05
SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40) 40 0.002
SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32) 38 0.010
SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.024
SB_2842| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.024
SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 36 0.032
SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38) 36 0.032
SB_16146| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 36 0.032
SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37) 36 0.032
SB_31961| Best HMM Match : EGF (HMM E-Value=0) 35 0.055
SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_37512| Best HMM Match : DnaJ (HMM E-Value=1.3e-29) 33 0.17
SB_34242| Best HMM Match : DnaJ (HMM E-Value=9.2e-30) 31 0.68
SB_11933| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_58160| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_45438| Best HMM Match : DnaJ (HMM E-Value=4.4e-26) 30 2.1
SB_17567| Best HMM Match : DnaJ (HMM E-Value=0.0007) 29 4.8
SB_16586| Best HMM Match : DnaJ (HMM E-Value=4.9e-10) 28 6.3
SB_16773| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_16477| Best HMM Match : DnaJ (HMM E-Value=8.1e-33)
Length = 138
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +1
Query: 502 ALNGHPDKNPDXSDEANRRFQEISEAYEVL 591
AL HPDKNP +EA R+F+EISEAYEVL
Sbjct: 27 ALKWHPDKNPQNKEEAERKFKEISEAYEVL 56
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +3
Query: 423 MVDYYRVLGVTRTATDTEIKKAYRKTSTEW 512
M DYY +L V R+A++ +IKK+YRK + +W
Sbjct: 1 MADYYDILEVPRSASEQDIKKSYRKLALKW 30
>SB_3383| Best HMM Match : DnaJ (HMM E-Value=3.8e-40)
Length = 250
Score = 48.8 bits (111), Expect = 4e-06
Identities = 27/73 (36%), Positives = 41/73 (56%)
Frame = +3
Query: 429 DYYRVLGVTRTATDTEIKKAYRKTSTEWAS**KS*XF**S*SKIPRNF*SL*GSSDEXKR 608
DYY VLGV R+A++ ++KKAYR+ + W + K + + SD+ KR
Sbjct: 4 DYYEVLGVPRSASEEDVKKAYRRQALRWHPDKNPTNREHAEEKFKKLSEAYEVLSDKEKR 63
Query: 609 RVYDQYGKEXLNN 647
+YD+YGKE L +
Sbjct: 64 DIYDKYGKEGLTS 76
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +1
Query: 502 ALNGHPDKNPDXSDEANRRFQEISEAYEVLQMRXNAECMTSTARXG*ITEGS 657
AL HPDKNP + A +F+++SEAYEVL + + + G ++G+
Sbjct: 28 ALRWHPDKNPTNREHAEEKFKKLSEAYEVLSDKEKRDIYDKYGKEGLTSQGT 79
>SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 576
Score = 48.4 bits (110), Expect = 6e-06
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Frame = +3
Query: 429 DYYRVLGVTRTATDTEIKKAYRKTSTEW-AS**KS*XF**S*SKIPRNF*SL*GSSDEXK 605
DYY++LGV R A+D +IKKA+RK + ++ K ++ + L SDE K
Sbjct: 26 DYYQILGVPRNASDKQIKKAFRKMAVKYHPDKNKGKDAEEKFREVAEAYEVL---SDENK 82
Query: 606 RRVYDQYGKEXL-NNG 650
RR YDQ+G+E L NNG
Sbjct: 83 RRQYDQFGEEGLKNNG 98
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 502 ALNGHPDKNPDXSDEANRRFQEISEAYEVL 591
A+ HPDKN +A +F+E++EAYEVL
Sbjct: 50 AVKYHPDKNK--GKDAEEKFREVAEAYEVL 77
>SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37)
Length = 399
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/75 (37%), Positives = 43/75 (57%)
Frame = +3
Query: 426 VDYYRVLGVTRTATDTEIKKAYRKTSTEWAS**KS*XF**S*SKIPRNF*SL*GSSDEXK 605
+DYY +LG+TR+ATD +IKK YRK S ++ + K + + SD K
Sbjct: 3 LDYYDILGLTRSATDADIKKEYRKLSLKYHPDKNQEPS--AEVKFRQAAEAYDVLSDPKK 60
Query: 606 RRVYDQYGKEXLNNG 650
R +Y+Q+G+E L +G
Sbjct: 61 RAIYNQFGEEGLKSG 75
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 502 ALNGHPDKNPDXSDEANRRFQEISEAYEVL 591
+L HPDKN + S E +F++ +EAY+VL
Sbjct: 28 SLKYHPDKNQEPSAEV--KFRQAAEAYDVL 55
>SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 41.5 bits (93), Expect = 6e-04
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +3
Query: 429 DYYRVLGVTRTATDTEIKKAYRKTSTEW-AS**KS*XF**S*SKIPRNF*SL*GSSDEXK 605
+YY +LGV + A+D E+KKAY+K + ++ K +I + L SD K
Sbjct: 4 NYYDILGVKKDASDQELKKAYKKQAFKYHPDKNKDPGAEEKFKEIAEAYEVL---SDPQK 60
Query: 606 RRVYDQYGKEXLNNG 650
R ++DQYG+E L G
Sbjct: 61 REIFDQYGEEGLKGG 75
Score = 34.7 bits (76), Expect = 0.073
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +1
Query: 502 ALNGHPDKNPDXSDEANRRFQEISEAYEVL 591
A HPDKN D A +F+EI+EAYEVL
Sbjct: 28 AFKYHPDKNKDPG--AEEKFKEIAEAYEVL 55
>SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 572
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +1
Query: 502 ALNGHPDKNPDXSDEANRRFQEISEAYEVL 591
AL HPDKN D ++E+ R F+EI +AY+VL
Sbjct: 28 ALKWHPDKNLDNAEESTRVFREIQQAYDVL 57
Score = 34.3 bits (75), Expect = 0.096
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 432 YYRVLGVTRTATDTEIKKAYRKTSTEW 512
+Y VLGV R D+ +KK YRK + +W
Sbjct: 5 HYEVLGVERDVDDSALKKTYRKLALKW 31
>SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 966
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +3
Query: 432 YYRVLGVTRTATDTEIKKAYRKTSTEWAS**KS*XF**S*SKIPRNF*SL*GSSDEXKRR 611
YY +L V TAT TEIKK+YRK + ++ K+ +I + + L SDE KR+
Sbjct: 66 YYDILNVPPTATATEIKKSYRKLALKYHP-DKNPDEGDRFKQISQAYEVL---SDEKKRK 121
Query: 612 VYDQYGKEXLNNG 650
+YD+ G++ + G
Sbjct: 122 IYDEGGEDAIKGG 134
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +1
Query: 502 ALNGHPDKNPDXSDEANRRFQEISEAYEVL 591
AL HPDKNPD D RF++IS+AYEVL
Sbjct: 89 ALKYHPDKNPDEGD----RFKQISQAYEVL 114
>SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40)
Length = 351
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 429 DYYRVLGVTRTATDTEIKKAYRKTSTEW-AS**KS*XF**S*SKIPRNF*SL*GSSDEXK 605
DYY VL V + A+ +IKKAYRK + ++ KS +I + L SD K
Sbjct: 4 DYYAVLNVDKAASADDIKKAYRKQALKYHPDKNKSPGAEEKFKEISEAYEVL---SDPKK 60
Query: 606 RRVYDQYGKEXL 641
+ +YDQYG+E L
Sbjct: 61 KEIYDQYGEEGL 72
Score = 35.9 bits (79), Expect = 0.032
Identities = 19/30 (63%), Positives = 21/30 (70%)
Frame = +1
Query: 502 ALNGHPDKNPDXSDEANRRFQEISEAYEVL 591
AL HPDKN S A +F+EISEAYEVL
Sbjct: 28 ALKYHPDKNK--SPGAEEKFKEISEAYEVL 55
>SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 875
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 502 ALNGHPDKNPDXSDEANRRFQEISEAYEVL 591
A+ HPD++ D +EA + F EI EAYE+L
Sbjct: 818 AMKWHPDRHRDNKEEAQKHFMEIQEAYEIL 847
Score = 37.1 bits (82), Expect = 0.014
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +3
Query: 435 YRVLGVTRTATDTEIKKAYRKTSTEW 512
YRVLG+T AT EIKK Y+K + +W
Sbjct: 796 YRVLGLTEDATQEEIKKRYKKLAMKW 821
>SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +3
Query: 381 YFKILEPP*GRDTAMVDYYRVLGVTRTATDTEIKKAYRK 497
YFK+ + P VDYY VL V + A + E+K AYR+
Sbjct: 115 YFKMADAPHDESEDEVDYYAVLAVRKEANEDELKAAYRR 153
>SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 429 DYYRVLGVTRTATDTEIKKAYRKTSTEW 512
DYY++LG+ R EI KAYRK + +W
Sbjct: 208 DYYKILGLKRNCNKREITKAYRKLAVKW 235
>SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 37.5 bits (83), Expect = 0.010
Identities = 13/23 (56%), Positives = 21/23 (91%)
Frame = +3
Query: 429 DYYRVLGVTRTATDTEIKKAYRK 497
DYY++L +++TA++ EIKKAY+K
Sbjct: 159 DYYKILNISKTASEDEIKKAYKK 181
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 4/34 (11%)
Frame = +1
Query: 502 ALNGHPDKNPDXSDE----ANRRFQEISEAYEVL 591
AL HPD++ SDE A ++F+E++EAY +L
Sbjct: 183 ALKHHPDRHSGASDEQKKIAEKQFKEVNEAYSIL 216
>SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32)
Length = 264
Score = 37.5 bits (83), Expect = 0.010
Identities = 13/23 (56%), Positives = 21/23 (91%)
Frame = +3
Query: 429 DYYRVLGVTRTATDTEIKKAYRK 497
DYY++L +++TA++ EIKKAY+K
Sbjct: 159 DYYKILNISKTASEDEIKKAYKK 181
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 4/34 (11%)
Frame = +1
Query: 502 ALNGHPDKNPDXSDE----ANRRFQEISEAYEVL 591
AL HPD++ SDE A ++F+E++EAY +L
Sbjct: 183 ALKHHPDRHSGASDEQKKIAEKQFKEVNEAYSIL 216
>SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 36.3 bits (80), Expect = 0.024
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +1
Query: 514 HPDKNPDXSDEANRRFQEISEAYEVL 591
HPD N D S A+ +FQE+SEAYEVL
Sbjct: 87 HPDTNKDKS--ASEKFQEVSEAYEVL 110
Score = 31.9 bits (69), Expect = 0.51
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 429 DYYRVLGVTRTATDTEIKKAY 491
DYY++LGV A EIKKAY
Sbjct: 59 DYYKILGVPPNANQKEIKKAY 79
>SB_2842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 36.3 bits (80), Expect = 0.024
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = +3
Query: 435 YRVLGVTRTATDTEIKKAYRKTSTE 509
Y VLGV++TA+++EIK+AYRK S +
Sbjct: 17 YDVLGVSKTASESEIKRAYRKISLQ 41
>SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 386
Score = 35.9 bits (79), Expect = 0.032
Identities = 27/72 (37%), Positives = 38/72 (52%)
Frame = +3
Query: 435 YRVLGVTRTATDTEIKKAYRKTSTEWAS**KS*XF**S*SKIPRNF*SL*GSSDEXKRRV 614
Y +LGV + A+D +IKKAYRK + E K+ I + L SD KR +
Sbjct: 7 YDLLGVPQNASDNDIKKAYRKLAKELHP-DKNPDTGEKFKDITFAYEIL---SDPEKREL 62
Query: 615 YDQYGKEXLNNG 650
YD+YG++ L G
Sbjct: 63 YDRYGEKGLREG 74
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +1
Query: 514 HPDKNPDXSDEANRRFQEISEAYEVL 591
HPDKNPD + +F++I+ AYE+L
Sbjct: 33 HPDKNPDTGE----KFKDITFAYEIL 54
>SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38)
Length = 161
Score = 35.9 bits (79), Expect = 0.032
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 429 DYYRVLGVTRTATDTEIKKAYRK 497
+YY +LGV R A+D +IKKAYR+
Sbjct: 4 NYYAILGVPRNASDDDIKKAYRR 26
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +1
Query: 502 ALNGHPDKNPDXSDEANRRFQEISEAYEVL 591
AL HPDKN + A +F+EISEAY+VL
Sbjct: 28 ALIFHPDKNKNSG--AEEKFKEISEAYKVL 55
>SB_16146| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 79
Score = 35.9 bits (79), Expect = 0.032
Identities = 27/72 (37%), Positives = 38/72 (52%)
Frame = +3
Query: 435 YRVLGVTRTATDTEIKKAYRKTSTEWAS**KS*XF**S*SKIPRNF*SL*GSSDEXKRRV 614
Y +LGV + A+D +IKKAYRK + E K+ I + L SD KR +
Sbjct: 7 YDLLGVPQNASDNDIKKAYRKLAKELHP-DKNPDTGEKFKDITFAYEIL---SDPEKREL 62
Query: 615 YDQYGKEXLNNG 650
YD+YG++ L G
Sbjct: 63 YDRYGEKGLREG 74
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +1
Query: 514 HPDKNPDXSDEANRRFQEISEAYEVL 591
HPDKNPD + +F++I+ AYE+L
Sbjct: 33 HPDKNPDTGE----KFKDITFAYEIL 54
>SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37)
Length = 238
Score = 35.9 bits (79), Expect = 0.032
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +3
Query: 429 DYYRVLGVTRTATDTEIKKAYRKTSTEWAS**KS*XF**S*SKIPRNF*SL*GS----SD 596
D+Y +LGV R A+ +IK+AYRK + + K F + + +D
Sbjct: 25 DFYAILGVPRDASKNQIKRAYRKLAMKLHPDKNK-----DDPKAQEKFHDIGAAYEVLAD 79
Query: 597 EXKRRVYDQYGKEXLNN 647
+ +R++YDQ G+E L N
Sbjct: 80 DDQRKIYDQRGEEGLKN 96
>SB_31961| Best HMM Match : EGF (HMM E-Value=0)
Length = 2813
Score = 35.1 bits (77), Expect = 0.055
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +3
Query: 429 DYYRVLGVTRTATDTEIKKAYRKTSTE 509
++Y+VLGV TAT EI++AYR+ S +
Sbjct: 2483 NFYQVLGVETTATQAEIRRAYRRISLQ 2509
>SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +3
Query: 429 DYYRVLGVTRTATDTEIKKAYRKTSTEW 512
+YY VLGV R AT +I++AYR+ + ++
Sbjct: 4 NYYEVLGVERNATTDDIRRAYRRLALKY 31
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +1
Query: 502 ALNGHPDKNPDXSDEANRRFQEISEAYEVL 591
AL HPDKN + F+E+SEAYEVL
Sbjct: 28 ALKYHPDKNAGTEEN----FKEVSEAYEVL 53
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 33.5 bits (73), Expect = 0.17
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +3
Query: 429 DYYRVLGVTRTATDTEIKKAYRK 497
DYY + G++R AT EI+KA++K
Sbjct: 28 DYYELFGISRDATSKEIRKAFKK 50
>SB_37512| Best HMM Match : DnaJ (HMM E-Value=1.3e-29)
Length = 291
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +1
Query: 502 ALNGHPDKNPDXSDEANRRFQEISEAYEVL 591
AL HPDKNPD + +A+ F ++S+A EVL
Sbjct: 31 ALKCHPDKNPD-NPKASELFHKLSKALEVL 59
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 429 DYYRVLGVTRTATDTEIKKAYRK 497
+YY LGV + +T+ EI KAYRK
Sbjct: 7 NYYDTLGVHKDSTEKEILKAYRK 29
>SB_34242| Best HMM Match : DnaJ (HMM E-Value=9.2e-30)
Length = 238
Score = 31.5 bits (68), Expect = 0.68
Identities = 22/52 (42%), Positives = 29/52 (55%)
Frame = +1
Query: 502 ALNGHPDKNPDXSDEANRRFQEISEAYEVLQMRXNAECMTSTARXG*ITEGS 657
++ HPD++ SD+ + FQEI+EAY VL N E R G I EGS
Sbjct: 96 SMKHHPDRH-QGSDKKHEVFQEIAEAYSVL---GNLESRKQYDR-GLIVEGS 142
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 429 DYYRVLGVTRTATDTEIKKAYRKTS 503
+YY VLGV+ A+ ++IK AY K S
Sbjct: 72 NYYNVLGVSPKASQSKIKDAYYKLS 96
>SB_11933| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 238
Score = 31.5 bits (68), Expect = 0.68
Identities = 22/52 (42%), Positives = 29/52 (55%)
Frame = +1
Query: 502 ALNGHPDKNPDXSDEANRRFQEISEAYEVLQMRXNAECMTSTARXG*ITEGS 657
++ HPD++ SD+ + FQEI+EAY VL N E R G I EGS
Sbjct: 96 SMKHHPDRH-QGSDKKHEVFQEIAEAYSVL---GNLESRKQYDR-GLIVEGS 142
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 429 DYYRVLGVTRTATDTEIKKAYRKTS 503
+YY VLGV+ A+ ++IK AY K S
Sbjct: 72 NYYNVLGVSPKASQSKIKDAYYKLS 96
>SB_58160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 514 HPDKNPDXSDEANRRFQEISEAYEVL 591
HPD NPD D +++ F ++SEAY L
Sbjct: 36 HPDVNPDDPD-SHKAFIKVSEAYTTL 60
>SB_45438| Best HMM Match : DnaJ (HMM E-Value=4.4e-26)
Length = 211
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 514 HPDKNPDXSDEANRRFQEISEAYEVL 591
HPD NPD D +++ F ++SEAY L
Sbjct: 97 HPDVNPDDPD-SHKAFIKVSEAYTTL 121
>SB_17567| Best HMM Match : DnaJ (HMM E-Value=0.0007)
Length = 831
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 429 DYYRVLGVTRTATDTEIKKAYRK 497
D Y +LGV A+D +IK+ YRK
Sbjct: 800 DPYSILGVPPEASDDDIKRQYRK 822
>SB_16586| Best HMM Match : DnaJ (HMM E-Value=4.9e-10)
Length = 141
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +3
Query: 411 RDTAMVDYYRVLGVTRTATDTEIKKAYRKTSTE 509
R + D VLGV T T IK+AYRK +E
Sbjct: 69 RGPTLEDACNVLGVKPTDDATTIKRAYRKLMSE 101
>SB_16773| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1644
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 505 LNGHPDKNPDXSDEANRRFQEISEAYEVLQM 597
L HPDKNPD + + FQ + + L++
Sbjct: 1398 LKWHPDKNPDDVEFCTKVFQHLQNEIQRLEI 1428
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,378,729
Number of Sequences: 59808
Number of extensions: 296580
Number of successful extensions: 545
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 539
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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