Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0470.Seq
         (698 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        23   3.7  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   3.7  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    22   6.4  

>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 556 RFQEISEAYEVLQ 594
           RF+E+SE Y +LQ
Sbjct: 60  RFEEVSEKYGILQ 72


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 343 P*NHNGKYDFRICEHRLV 290
           P   +GK+D+R+  H+L+
Sbjct: 174 PQRTDGKHDYRVWNHQLI 191


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/35 (25%), Positives = 19/35 (54%)
 Frame = +2

Query: 278 SHATNQTVFTNPKIVFSIVVSRLTPVVFYRKSPML 382
           S+ T   ++ +P   FS+ ++++  V +    PML
Sbjct: 130 SYGTLFFIYVHPSATFSLDLNKVVSVFYTAVIPML 164


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,344
Number of Sequences: 438
Number of extensions: 2651
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)