Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0469.Seq
         (439 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   1.7  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   3.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   6.8  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    20   9.0  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 262 IDAVHVQSVQMRASLLNFLD 203
           +DA+HV S  +R +   F D
Sbjct: 206 LDAIHVMSYDLRGNWAGFAD 225


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 77  TTCSLQFLLKADVHSHLSVHC 15
           TTC +  +L   V   LS+HC
Sbjct: 315 TTCDIATILDFWVRCVLSLHC 335


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +3

Query: 234 CTLCTCTA 257
           CT+CTC A
Sbjct: 774 CTVCTCDA 781


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 215 ELPRRFAAEGHCLTIA 168
           E+   F  +GH LTIA
Sbjct: 162 EIKEAFQPKGHLLTIA 177


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,650
Number of Sequences: 336
Number of extensions: 2381
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9775509
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)