Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0469.Seq
(439 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58760-8|AAY55858.2| 216|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z75549-2|CAA99916.1| 313|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z75956-6|CAB61026.2| 472|Caenorhabditis elegans Hypothetical pr... 28 2.6
Z75954-8|CAB61020.2| 472|Caenorhabditis elegans Hypothetical pr... 28 2.6
AJ000259-1|CAA03975.1| 472|Caenorhabditis elegans osm-6 protein. 28 2.6
U64851-1|AAC47990.2| 186|Caenorhabditis elegans Ground-like (gr... 27 4.5
L23647-3|AAK67242.2| 183|Caenorhabditis elegans Hypothetical pr... 27 4.5
AF026208-2|AAB71269.3| 774|Caenorhabditis elegans Prion-like-(q... 27 4.5
Z97190-2|CAM06586.1| 650|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z92834-4|CAB07387.1| 117|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z66564-7|CAA91472.2| 650|Caenorhabditis elegans Hypothetical pr... 27 7.9
AC024755-10|ABS19458.1| 245|Caenorhabditis elegans Hypothetical... 27 7.9
>U58760-8|AAY55858.2| 216|Caenorhabditis elegans Hypothetical
protein C27A2.7 protein.
Length = 216
Score = 29.1 bits (62), Expect = 1.5
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = -3
Query: 161 VEQCARVSAPARQVAHPARKRHTIEQSLTTCSLQFLLKADVHSHLSVH 18
VE C + + + HT + C F K D+ SHLS H
Sbjct: 162 VENCTHPGYKCTKALNAHVRTHTRPYACHRCDASFARKNDLQSHLSTH 209
>Z75549-2|CAA99916.1| 313|Caenorhabditis elegans Hypothetical
protein T19C4.2 protein.
Length = 313
Score = 28.7 bits (61), Expect = 2.0
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +1
Query: 73 VVRLCSIVCLLRAGCATWRAGADTRAHCSTP*AIVRQWPSAANRRGSSGGRHAFVHFA-- 246
V LCS++C +++ W+A + +A+ I+ SA G AF+ F
Sbjct: 180 VCTLCSLICNIKSCSIVWKASIEMKANMEANFLILITVTSAVQTLG------AFITFVLN 233
Query: 247 HVPHQLLYDIYNTLAL 294
P+ +Y ++T L
Sbjct: 234 EYPNSPMYSTFHTYVL 249
>Z75956-6|CAB61026.2| 472|Caenorhabditis elegans Hypothetical
protein R31.3 protein.
Length = 472
Score = 28.3 bits (60), Expect = 2.6
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 107 EPDALPGVLEQIHAHIVPPHKLLLGNGLLQQIVEEVQEGGT 229
EP L G LE + I+P K G G ++ I + V+EGG+
Sbjct: 52 EPINLNG-LEDVRMLIIPQPKTSFGTGEIEAIWKFVEEGGS 91
>Z75954-8|CAB61020.2| 472|Caenorhabditis elegans Hypothetical
protein R31.3 protein.
Length = 472
Score = 28.3 bits (60), Expect = 2.6
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 107 EPDALPGVLEQIHAHIVPPHKLLLGNGLLQQIVEEVQEGGT 229
EP L G LE + I+P K G G ++ I + V+EGG+
Sbjct: 52 EPINLNG-LEDVRMLIIPQPKTSFGTGEIEAIWKFVEEGGS 91
>AJ000259-1|CAA03975.1| 472|Caenorhabditis elegans osm-6 protein.
Length = 472
Score = 28.3 bits (60), Expect = 2.6
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 107 EPDALPGVLEQIHAHIVPPHKLLLGNGLLQQIVEEVQEGGT 229
EP L G LE + I+P K G G ++ I + V+EGG+
Sbjct: 52 EPINLNG-LEDVRMLIIPQPKTSFGTGEIEAIWKFVEEGGS 91
>U64851-1|AAC47990.2| 186|Caenorhabditis elegans Ground-like (grd
related) protein12 protein.
Length = 186
Score = 27.5 bits (58), Expect = 4.5
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -2
Query: 174 NSLWGGTMCACICSSTPGS 118
NSL+GG+ C C C+ P +
Sbjct: 21 NSLFGGSNCGCSCTPPPST 39
>L23647-3|AAK67242.2| 183|Caenorhabditis elegans Hypothetical
protein ZC262.8 protein.
Length = 183
Score = 27.5 bits (58), Expect = 4.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 204 SRKFRREARICTLCTCTASIALRH 275
SR R++ +C+LCTC I L +
Sbjct: 58 SRGARKDDELCSLCTCNVPIKLTY 81
>AF026208-2|AAB71269.3| 774|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 40
protein.
Length = 774
Score = 27.5 bits (58), Expect = 4.5
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +1
Query: 190 SAANRRGSSGGRHAFVHFAHVPHQLLYDIYNTLALAQMEGSAPMH--FSSMLVTLYGPGD 363
+ A +R ++G + VH+ Q++ I A G+ P++ F+S V P +
Sbjct: 590 TTAPQRPANGNTNQVVHYYQDGKQVVQQIIPRRIAAN--GNLPLNGPFNSQSVGPTDPAE 647
Query: 364 FSQEATLTRERYGQPSTQAANVVR 435
+ + + Y QP T+ R
Sbjct: 648 YQRRQRALHQAYSQPQTRGTVATR 671
>Z97190-2|CAM06586.1| 650|Caenorhabditis elegans Hypothetical
protein F52D10.6 protein.
Length = 650
Score = 26.6 bits (56), Expect = 7.9
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 355 PGDFSQEATLTRERYGQPSTQAANVVR 435
P S E +TR+ +G+P Q ANV++
Sbjct: 142 PPSCSSEYYITRKDFGKPEPQLANVLK 168
>Z92834-4|CAB07387.1| 117|Caenorhabditis elegans Hypothetical
protein F39B2.6 protein.
Length = 117
Score = 26.6 bits (56), Expect = 7.9
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 153 LFHPISYC*AMAFCSKSSRKFRREAR 230
L+H + YC A A SK R REAR
Sbjct: 67 LYHKLHYCIACAIHSKVVRNRSREAR 92
>Z66564-7|CAA91472.2| 650|Caenorhabditis elegans Hypothetical
protein F52D10.6 protein.
Length = 650
Score = 26.6 bits (56), Expect = 7.9
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 355 PGDFSQEATLTRERYGQPSTQAANVVR 435
P S E +TR+ +G+P Q ANV++
Sbjct: 142 PPSCSSEYYITRKDFGKPEPQLANVLK 168
>AC024755-10|ABS19458.1| 245|Caenorhabditis elegans Hypothetical
protein Y34B4A.2 protein.
Length = 245
Score = 26.6 bits (56), Expect = 7.9
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 191 LQQIVEEVQEGGTHLYTL 244
LQQ+++EV+E THL TL
Sbjct: 20 LQQVIKEVKEKETHLKTL 37
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,095,986
Number of Sequences: 27780
Number of extensions: 238642
Number of successful extensions: 625
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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