Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0468.Seq
         (699 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    25   0.45 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.0  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    22   5.5  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 17/48 (35%), Positives = 21/48 (43%)
 Frame = +1

Query: 262 MPGPGTYTTDRAAAALTKRPPAFTMAPRRELKPPTAAVPGPGVYCPEK 405
           +P P   TT R   A   RPP+    P  +   P    P PG + PEK
Sbjct: 399 VPEPTISTTPRPEWA---RPPS---TPSADGSKPVQTTPKPGQWVPEK 440


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = -2

Query: 134 SPVREGLHGDLLKTPERGQGPPVRPYSVRSHKARVSAP 21
           S +   L G+ L   ++ Q PP +PY     +   S P
Sbjct: 532 STINRHLRGNELLPMQQSQNPPTKPYGTCRSEGIFSDP 569



 Score = 23.8 bits (49), Expect = 1.4
 Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
 Frame = +1

Query: 280  YTTDRAAAALTKRPPAFTMAPRRELKP-PT--AAVPGPGVYCPEKVCVTLPWAPGTYI 444
            +TT       T RP   +   R      PT    +P P V  PE    + P  PG Y+
Sbjct: 1052 WTTTTTRRTTTTRPTTTSTTTRPTTTNWPTQGTTIPPPAVVMPEVDKPSQPCEPGQYV 1109


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
 Frame = +1

Query: 256 GLMPGPGTYTTDRAAAALTKRPP--AFTMAPRRELKPP 363
           G+ PG          AA+  RPP  AF  AP   L  P
Sbjct: 194 GIFPGGAPPLVSPFLAAMAHRPPHFAFPGAPGHILNIP 231


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,907
Number of Sequences: 336
Number of extensions: 4045
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)