Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0468.Seq
(699 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44955| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_46589| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.055
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 31 1.2
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 31 1.2
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_57210| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_27943| Best HMM Match : Pox_A32 (HMM E-Value=0.047) 29 2.7
SB_9870| Best HMM Match : GspM (HMM E-Value=1.9) 29 2.7
SB_42700| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_33472| Best HMM Match : DUF1309 (HMM E-Value=3.1e-16) 29 3.6
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_6245| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_56578| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_39847| Best HMM Match : Histone (HMM E-Value=1.3e-07) 28 6.3
SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002) 28 6.3
SB_42613| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 28 8.4
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) 28 8.4
SB_43343| Best HMM Match : fn3 (HMM E-Value=3.4e-39) 28 8.4
SB_10556| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_44955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 48.4 bits (110), Expect = 6e-06
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Frame = +2
Query: 32 PAPCDYEPNKAARAVLDHAPAFSIGLRVSLPGPGSKTPAPNTYSMPPVLGEAKEGSKRAA 211
P P +Y P K + AP++S G R TP+PN+YS+P + G K +K +A
Sbjct: 221 PGPGEYSPEKHSIPHERKAPSYSFGSRTKY-AQKQITPSPNSYSLPALTG-PKVVNKTSA 278
Query: 212 PAFSITGR---GKFSE 250
A+S+TGR G FSE
Sbjct: 279 AAYSLTGRSNNGGFSE 294
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +1
Query: 265 PGPGTYTTDRAAAALTKRPPAFTMAPRRELKPPTAAVPGPGVYCPEKVCVTLPWAP 432
PGPGTY + KR A++M R + + PGPG + PEKV + AP
Sbjct: 300 PGPGTYKVT-SPDKYRKRMAAYSMNGRNFMPGDSTQKPGPGQHSPEKVVMHQKAAP 354
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 259 LMPGPGTYTTDRAAAALTKRPPAFTMAPRRELKPPTAAVPGPGVYCPEK 405
+ PGP PAF++ R + K + VPGPG Y PEK
Sbjct: 183 ISPGPKYMVPSGLTQCGKDGTPAFSLYSRAKEKN-LSHVPGPGEYSPEK 230
>SB_46589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 562
Score = 35.1 bits (77), Expect = 0.055
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +1
Query: 265 PGPGTYTTDRAAAALTKRPPAFTMAPRRELKPPTAAVPGPGVYCPEK 405
P PGTY KR PA++M R + PGPG + PEK
Sbjct: 413 PAPGTYKVHNPDYN-KKRMPAYSMNGRNYMTGDNTLKPGPGAHSPEK 458
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 277 TYTTDRAAAALTKRPPAFTMAPRRELKPPTAAVP 378
T + A +T PP TMAP+ L P T A P
Sbjct: 62 TVAPETTTAPVTTLPPDSTMAPKSTLAPETTAAP 95
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 277 TYTTDRAAAALTKRPPAFTMAPRRELKPPTAAVP 378
T + A +T PP TMAP+ L P T A P
Sbjct: 1863 TVAPETTTAPVTTLPPDSTMAPKSTLAPETTAAP 1896
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +1
Query: 277 TYTTDRAAAALTKRPPAFTMAPRRELKPPTAAVPG 381
T + A T P TMAP + P T AVPG
Sbjct: 391 TMAPETTMAPETTIAPETTMAPETTIAPETTAVPG 425
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +1
Query: 259 LMPGPGTYTTDRAAAAL-TKRPPAFTMAPRRELKPPTAAVP 378
L GP T AL T P FTM P + P T VP
Sbjct: 895 LTAGPATTLAPTTIGALETTEAPEFTMVPETTMAPKTTTVP 935
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = +1
Query: 277 TYTTDRAAAALTKRPPAFTMAPRRELKPPTAAVPGPGVYCPEKVCVTLPWAPGT 438
T + A++T P FT+AP + P + P + V APGT
Sbjct: 2258 TMALESTVASVTTMAPEFTLAPEITMTPESTVAPETIIASETTVAPETTMAPGT 2311
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +1
Query: 322 PAFTMAPRRELKPPTAAVPGPGVYCPEKVCVTLPWAPGTYI 444
PA TMAP +KP T PG V + + AP T I
Sbjct: 3915 PATTMAPETTVKPETTEAPGTTVAPETTMVIDSTVAPETTI 3955
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +1
Query: 277 TYTTDRAAAALTKRPPAFTMAPRRELKPPTAAVP 378
T T D A T P T+AP + P T AVP
Sbjct: 3672 TLTPDTTVAPETPMAPETTVAPETTVTPETTAVP 3705
>SB_57210| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 600 RCDKVLKTLCLMTNDRTLLQT-GLMLGLAGESFQVAALV 487
RCDK+ +LCL NDR + + G +G +F +V
Sbjct: 23 RCDKLPPSLCLFQNDRNKMSSRGKTMGTRNSTFPKIKIV 61
>SB_27943| Best HMM Match : Pox_A32 (HMM E-Value=0.047)
Length = 983
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +2
Query: 47 YEPNKAARAVLDHAPAFSIGL-RVSLPGPGSKTPAPNTYSMPPVLGEAKEGSKRAAPAFS 223
Y + A PA G R + P P + AP T PP+ A+ G+K APA +
Sbjct: 827 YTRRRELAAAFTRTPAGGPGAERAADPHPAADGGAPPT--RPPLAATARTGTKERAPATA 884
Query: 224 ITGRG 238
+ G
Sbjct: 885 LRAPG 889
>SB_9870| Best HMM Match : GspM (HMM E-Value=1.9)
Length = 522
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +2
Query: 47 YEPNKAARAVLDHAPAFSIGL-RVSLPGPGSKTPAPNTYSMPPVLGEAKEGSKRAAPAFS 223
Y + A PA G R + P P + AP T PP+ A+ G+K APA +
Sbjct: 283 YTRRRELAAAFTRTPAGGPGAERAADPHPAADGGAPPT--RPPLAATARTGTKERAPATA 340
Query: 224 ITGRG 238
+ G
Sbjct: 341 LRAPG 345
>SB_42700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -2
Query: 101 LKTPERGQGPPVRPYSVRSHKARVSAPLEE 12
++T E PP RP+S ++ +RVSAP +E
Sbjct: 47 IQTAESPSRPPWRPFSGQASLSRVSAPSKE 76
>SB_33472| Best HMM Match : DUF1309 (HMM E-Value=3.1e-16)
Length = 97
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +2
Query: 29 TPAPCDYEPNKAARAVLDHAPAFSIGLR 112
TPAP Y P K HAPA+S+G R
Sbjct: 5 TPAPGAYSPEKVHPQGERHAPAYSMGGR 32
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 385 GVYCPEKVCVTLPWAPGTYI 444
G YCPE LP +PGTY+
Sbjct: 887 GHYCPEGTASPLPCSPGTYM 906
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 355 KPPTAAVPGPGVYCPEKVCVTLPWAPGTYILEFR 456
K P+A V PG YC E V P A G+Y E++
Sbjct: 794 KRPSAYVCTPGHYCTEGSPVKRPCASGSYQDEYQ 827
>SB_6245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/54 (37%), Positives = 22/54 (40%)
Frame = +2
Query: 11 PPRVEPTPAPCDYEPNKAARAVLDHAPAFSIGLRVSLPGPGSKTPAPNTYSMPP 172
PP+ P P PC P A L APA LP PAPN + PP
Sbjct: 764 PPQFAPVPPPCAPIPPMPCSAPLPPAPA-PFSAAPHLP------PAPNISAEPP 810
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Frame = +1
Query: 310 TKRPPAFTMAPRRELKPPT----AAVPGPGVYCPEKVC-VTLPWAPGTY 441
TK PPA + P+ KPP A VP P P C LP AP +
Sbjct: 745 TKSPPAPPLPPKVTPKPPAPPQFAPVPPPCAPIPPMPCSAPLPPAPAPF 793
>SB_56578| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 28.3 bits (60), Expect = 6.3
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +1
Query: 184 SERRE*KSCTGFQY-HRSWKVF*S*GLMPGPGTYTTDRAAAALTKRPPAFTMAPRRELKP 360
+ RR+ ++C Y H+S K L+ G YT R AA R PA ++ P
Sbjct: 717 ASRRDARACAPKAYTHQSRKATLPVSLI---GLYTRRRELAAAFTRTPAVNQRATDDVTP 773
Query: 361 PTAAVPGPGVYCPEKVCVTLPWAPG 435
P + ++V T APG
Sbjct: 774 PARPLLAAAQQTKDRVQATSLRAPG 798
>SB_39847| Best HMM Match : Histone (HMM E-Value=1.3e-07)
Length = 407
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Frame = -2
Query: 452 NSKMYVPGAQGKVTQTFSGQYTPGPGTAAV-----GGFSSRLGAIVKAGGRFVNAAA 297
+S + V G G + G G A++ GG + + GA+++AG FVN AA
Sbjct: 221 DSPLLVAGGGGGAYAYLARSKDGGNGQASINGTFGGGSNGKGGALIQAGSDFVNGAA 277
>SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002)
Length = 3616
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/68 (26%), Positives = 29/68 (42%)
Frame = -1
Query: 558 DRTLLQTGLMLGLAGESFQVAALVELLCPANGRVSKFQNVCARRPGQSHANLLRTIHSGT 379
+R+L GL+ G + F L+ A+ +S F VC + + IH G
Sbjct: 2827 NRSLKFPGLISGCTMDWFSRWPKDALIAVADHFLSSFDIVCTAEIKTQVVHSMGVIHDGV 2886
Query: 378 GNRCSGWF 355
N C+ +F
Sbjct: 2887 ANCCTDYF 2894
>SB_42613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 427
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -3
Query: 211 CSSFTPFFRFTKYRWHRISIGCWS 140
C F P T Y W S+GCWS
Sbjct: 22 CLRFVPRTNETNYVWIYRSLGCWS 45
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/56 (28%), Positives = 19/56 (33%)
Frame = +1
Query: 265 PGPGTYTTDRAAAALTKRPPAFTMAPRRELKPPTAAVPGPGVYCPEKVCVTLPWAP 432
P P + PP AP + P AA P P V+ P T AP
Sbjct: 461 PPPSVFAPSSGVPTPVAAPPPSVFAPSSGVPTPVAA-PPPSVFAPSSGVPTTVTAP 515
>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
Length = 3810
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 385 GVYCPEKVCVTLPWAPGTYILEFRHSS 465
G YCP+ V +P PG Y+ F H +
Sbjct: 2726 GHYCPKGSEVAIPCEPGFYLPGFEHKN 2752
>SB_43343| Best HMM Match : fn3 (HMM E-Value=3.4e-39)
Length = 2865
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Frame = -3
Query: 304 QLQLYRL-YTFPGQALILSFRKLSTTCDTESRCSSFTPFF-------RFTK-YRWHRISI 152
QL+ Y++ YT G ++ ++++T T + + +P+ RFT+ +RW I
Sbjct: 1909 QLRGYKIRYTANGTGVVTE--RIASTFSTSTVLTQLSPYMLYHILLTRFTRCWRWAIKPI 1966
Query: 151 GCWSFTPRSG 122
CW P G
Sbjct: 1967 KCWGIPPEDG 1976
>SB_10556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1788
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -3
Query: 211 CSSFTPFFRFTKYRWHRISIGCWS 140
C F P T Y W S+GCWS
Sbjct: 1342 CLRFVPRTNETNYVWIYRSLGCWS 1365
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,840,639
Number of Sequences: 59808
Number of extensions: 530177
Number of successful extensions: 1603
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1596
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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