Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0467.Seq
(593 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 116 3e-25
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 113 2e-24
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 110 2e-23
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 100 3e-20
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 83 6e-15
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 81 3e-14
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 80 4e-14
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 77 3e-13
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 77 4e-13
UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genom... 65 1e-09
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 65 1e-09
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 62 7e-09
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 62 1e-08
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 61 2e-08
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 61 2e-08
UniRef50_UPI0000F2BC8C Cluster: PREDICTED: similar to eukaryotic... 60 3e-08
UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor 4... 60 4e-08
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 60 4e-08
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 60 5e-08
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 60 5e-08
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 59 9e-08
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 59 9e-08
UniRef50_UPI00005A557C Cluster: PREDICTED: similar to eukaryotic... 58 1e-07
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 58 1e-07
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 58 2e-07
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 58 2e-07
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 58 2e-07
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 58 2e-07
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 57 3e-07
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 57 4e-07
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 57 4e-07
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 56 5e-07
UniRef50_A3J7I3 Cluster: ATP-independent RNA helicase; n=5; Bact... 56 5e-07
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 56 6e-07
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 56 6e-07
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 56 6e-07
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 56 6e-07
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 55 1e-06
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 55 1e-06
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 55 1e-06
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 55 1e-06
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 55 1e-06
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 55 1e-06
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 54 2e-06
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 54 2e-06
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 54 2e-06
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 54 2e-06
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 54 2e-06
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 54 3e-06
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 54 3e-06
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 54 3e-06
UniRef50_A6SDG8 Cluster: Putative uncharacterized protein; n=1; ... 54 3e-06
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 54 3e-06
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 54 3e-06
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 54 3e-06
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 54 3e-06
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 54 3e-06
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 53 4e-06
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 53 4e-06
UniRef50_Q1VPX9 Cluster: ATP-independent RNA helicase; n=9; Bact... 53 4e-06
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 53 4e-06
UniRef50_P34640 Cluster: Probable ATP-dependent RNA helicase DDX... 53 4e-06
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 53 6e-06
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 53 6e-06
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 53 6e-06
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 53 6e-06
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 53 6e-06
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 52 8e-06
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 52 8e-06
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 52 8e-06
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 52 8e-06
UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma j... 52 8e-06
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 52 8e-06
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 52 8e-06
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 52 1e-05
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 52 1e-05
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 52 1e-05
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 52 1e-05
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 52 1e-05
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 52 1e-05
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 52 1e-05
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 52 1e-05
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 52 1e-05
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 52 1e-05
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 52 1e-05
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 52 1e-05
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 52 1e-05
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 52 1e-05
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 52 1e-05
UniRef50_Q58HG3 Cluster: DEAD-box RNA helicase; n=4; Eukaryota|R... 52 1e-05
UniRef50_Q4P1Z0 Cluster: Putative uncharacterized protein; n=1; ... 52 1e-05
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 52 1e-05
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 51 2e-05
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 51 2e-05
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 51 2e-05
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 51 2e-05
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 51 2e-05
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 51 2e-05
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 51 2e-05
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 51 2e-05
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 51 2e-05
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 51 2e-05
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 51 2e-05
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 51 2e-05
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 51 2e-05
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 50 3e-05
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 50 3e-05
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 50 3e-05
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 50 3e-05
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 50 3e-05
UniRef50_Q7Q0A7 Cluster: ENSANGP00000011621; n=5; Endopterygota|... 50 3e-05
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 50 3e-05
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 50 3e-05
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 50 3e-05
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 50 3e-05
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 50 4e-05
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 50 4e-05
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 50 4e-05
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 50 4e-05
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 50 4e-05
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 50 4e-05
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 50 4e-05
UniRef50_A7ETZ1 Cluster: Putative uncharacterized protein; n=1; ... 50 4e-05
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 50 4e-05
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 50 4e-05
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 50 5e-05
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 50 5e-05
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 50 5e-05
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 50 5e-05
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 50 5e-05
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 50 5e-05
UniRef50_Q5KLJ5 Cluster: Translation initiation factor, putative... 50 5e-05
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 50 5e-05
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 49 7e-05
UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family pr... 49 7e-05
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 49 7e-05
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 49 7e-05
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 49 7e-05
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 49 7e-05
UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Re... 49 7e-05
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 49 7e-05
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 49 9e-05
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 49 9e-05
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 49 9e-05
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 49 9e-05
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 49 9e-05
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 49 9e-05
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 49 9e-05
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 49 9e-05
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 49 9e-05
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 49 9e-05
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 49 9e-05
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 49 9e-05
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 49 9e-05
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 49 9e-05
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 49 9e-05
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 49 9e-05
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 49 9e-05
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 48 1e-04
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 48 1e-04
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 48 1e-04
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 48 1e-04
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 48 1e-04
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 48 2e-04
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 48 2e-04
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 48 2e-04
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 48 2e-04
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 48 2e-04
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 48 2e-04
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 48 2e-04
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 48 2e-04
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 48 2e-04
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 48 2e-04
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 48 2e-04
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 48 2e-04
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 48 2e-04
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 48 2e-04
UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n... 48 2e-04
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 48 2e-04
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 48 2e-04
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 48 2e-04
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 48 2e-04
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 48 2e-04
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 47 3e-04
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 47 3e-04
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 47 3e-04
UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128, ... 47 3e-04
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 47 3e-04
UniRef50_Q389T9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 47 3e-04
UniRef50_Q9SW44 Cluster: DEAD-box ATP-dependent RNA helicase 16;... 47 3e-04
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 47 3e-04
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 47 4e-04
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 47 4e-04
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 47 4e-04
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 47 4e-04
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 47 4e-04
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 47 4e-04
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 47 4e-04
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 47 4e-04
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 47 4e-04
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 47 4e-04
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 47 4e-04
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 46 5e-04
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 46 5e-04
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 46 5e-04
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 46 5e-04
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 46 5e-04
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 46 5e-04
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 46 5e-04
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 46 5e-04
UniRef50_Q8X0H1 Cluster: Related to RNA helicase MSS116; n=2; Ne... 46 5e-04
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 46 5e-04
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 46 5e-04
UniRef50_Q2UST1 Cluster: ATP-dependent RNA helicase mss116, mito... 46 5e-04
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 46 5e-04
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 46 7e-04
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 46 7e-04
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 46 7e-04
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 46 7e-04
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 46 7e-04
UniRef50_A5B2H1 Cluster: Putative uncharacterized protein; n=1; ... 46 7e-04
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 46 7e-04
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 46 7e-04
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 46 7e-04
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 46 7e-04
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 46 9e-04
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 46 9e-04
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 46 9e-04
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 46 9e-04
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 46 9e-04
UniRef50_Q16KK0 Cluster: DEAD box ATP-dependent RNA helicase; n=... 46 9e-04
UniRef50_A6PWH4 Cluster: HLA-B associated transcript 1; n=6; Hom... 46 9e-04
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 46 9e-04
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 46 9e-04
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 46 9e-04
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 46 9e-04
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 45 0.001
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 45 0.001
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 45 0.001
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 45 0.001
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 45 0.001
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 45 0.001
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 45 0.001
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 45 0.001
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 45 0.001
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 45 0.001
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 45 0.001
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 45 0.001
UniRef50_UPI0000E4A052 Cluster: PREDICTED: similar to DEAD/H box... 45 0.002
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 45 0.002
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 45 0.002
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 45 0.002
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 45 0.002
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 45 0.002
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 45 0.002
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 45 0.002
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 45 0.002
UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-b... 45 0.002
UniRef50_Q4UG97 Cluster: ATP-dependent RNA helicase, putative; n... 45 0.002
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 45 0.002
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 45 0.002
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 45 0.002
UniRef50_A0CA40 Cluster: Chromosome undetermined scaffold_160, w... 45 0.002
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 45 0.002
UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1; P... 45 0.002
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 45 0.002
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 45 0.002
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 44 0.002
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 44 0.002
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 44 0.002
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 44 0.002
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 44 0.002
UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=... 44 0.002
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 44 0.002
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 44 0.002
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 44 0.002
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 44 0.002
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 44 0.002
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 44 0.002
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 44 0.002
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 44 0.002
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 44 0.002
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 44 0.002
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 44 0.003
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 44 0.003
UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2; Lactob... 44 0.003
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 44 0.003
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 44 0.003
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 44 0.003
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 44 0.003
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 44 0.003
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 44 0.003
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 44 0.003
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 44 0.003
UniRef50_Q5CKB1 Cluster: ATP-dependent RNA helicase; n=2; Crypto... 44 0.003
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 44 0.003
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 44 0.003
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 44 0.003
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 44 0.003
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 44 0.003
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 44 0.003
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 44 0.003
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 44 0.004
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 44 0.004
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 44 0.004
UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FA... 44 0.004
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 44 0.004
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 44 0.004
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 43 0.005
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 43 0.005
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 43 0.005
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 43 0.005
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 43 0.005
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 43 0.005
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 43 0.005
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 43 0.005
UniRef50_Q8SR49 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 43 0.005
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 43 0.005
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 43 0.005
UniRef50_Q9PPQ7 Cluster: ATP-dependent RNA helicase; n=1; Ureapl... 43 0.006
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 43 0.006
UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2; Corynebacte... 43 0.006
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 43 0.006
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 43 0.006
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 43 0.006
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 43 0.006
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 43 0.006
UniRef50_Q4N5F8 Cluster: ATP-dependent RNA helicase, putative; n... 43 0.006
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 43 0.006
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 43 0.006
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 43 0.006
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 43 0.006
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 43 0.006
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 43 0.006
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 42 0.008
UniRef50_Q8EUW5 Cluster: ATP-dependent RNA helicase; n=1; Mycopl... 42 0.008
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 42 0.008
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 42 0.008
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 42 0.008
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 42 0.008
UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5; T... 42 0.008
UniRef50_Q6CHU3 Cluster: Similarities with sp|P38112 Saccharomyc... 42 0.008
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 42 0.008
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 42 0.008
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 42 0.011
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 42 0.011
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 42 0.011
UniRef50_Q5CWY8 Cluster: Rok1p, eIF4A-1-family RNA SFII helicase... 42 0.011
UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2; P... 42 0.011
UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase... 42 0.011
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 42 0.011
UniRef50_Q2GWX0 Cluster: Putative uncharacterized protein; n=4; ... 42 0.011
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 42 0.011
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 42 0.011
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 42 0.011
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 42 0.014
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 42 0.014
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 42 0.014
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 42 0.014
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 42 0.014
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 42 0.014
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 42 0.014
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 42 0.014
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 42 0.014
UniRef50_A2DEZ7 Cluster: DEAD/DEAH box helicase family protein; ... 42 0.014
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 42 0.014
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 42 0.014
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 42 0.014
UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 42 0.014
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 42 0.014
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 42 0.014
UniRef50_UPI0000D574D5 Cluster: PREDICTED: similar to Probable A... 41 0.019
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 41 0.019
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 41 0.019
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 41 0.019
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 41 0.019
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 41 0.019
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 41 0.019
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 41 0.019
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 41 0.019
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 41 0.019
UniRef50_Q5CXB0 Cluster: CG6539/Dhh1-like SF II RNA helicase; n=... 41 0.019
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 41 0.019
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 41 0.019
UniRef50_A7RKF5 Cluster: Predicted protein; n=1; Nematostella ve... 41 0.019
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 41 0.019
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 41 0.019
UniRef50_A7TSU7 Cluster: Putative uncharacterized protein; n=1; ... 41 0.019
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 41 0.019
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 41 0.019
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 41 0.019
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 41 0.019
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 41 0.025
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 41 0.025
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 41 0.025
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 41 0.025
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 41 0.025
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 41 0.025
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 41 0.025
UniRef50_Q7R0K7 Cluster: GLP_154_39979_41331; n=1; Giardia lambl... 41 0.025
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 41 0.025
UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1; ... 41 0.025
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 41 0.025
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 41 0.025
UniRef50_Q0UG00 Cluster: ATP-dependent RNA helicase MSS116, mito... 41 0.025
UniRef50_Q4IBS2 Cluster: ATP-dependent RNA helicase MAK5; n=2; S... 41 0.025
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 40 0.033
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 40 0.033
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 40 0.033
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 40 0.033
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 40 0.033
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 40 0.033
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 40 0.033
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 40 0.033
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 40 0.033
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 40 0.033
UniRef50_Q3LW03 Cluster: UB2 probably involved in pre-mRNA splic... 40 0.033
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 40 0.033
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 40 0.033
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 40 0.033
UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 40 0.033
UniRef50_Q16XX2 Cluster: DEAD box ATP-dependent RNA helicase; n=... 40 0.033
UniRef50_P25808 Cluster: ATP-dependent rRNA helicase SPB4; n=10;... 40 0.033
UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;... 40 0.033
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 40 0.033
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 40 0.044
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 40 0.044
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 40 0.044
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 40 0.044
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 40 0.044
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 40 0.044
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 40 0.044
UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1; Ostreo... 40 0.044
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 40 0.044
UniRef50_A0CUN8 Cluster: Chromosome undetermined scaffold_28, wh... 40 0.044
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 40 0.044
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 40 0.044
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 40 0.044
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 40 0.044
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 40 0.044
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 40 0.044
UniRef50_UPI0000DB7B84 Cluster: PREDICTED: similar to Probable A... 40 0.058
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 40 0.058
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 40 0.058
UniRef50_Q4SEM8 Cluster: Chromosome undetermined SCAF14615, whol... 40 0.058
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 40 0.058
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 40 0.058
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 40 0.058
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 40 0.058
UniRef50_Q3LWF0 Cluster: ATP-dependent RNA helicase; n=1; Bigelo... 40 0.058
UniRef50_A7NWH7 Cluster: Chromosome chr5 scaffold_2, whole genom... 40 0.058
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 40 0.058
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 40 0.058
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 40 0.058
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 40 0.058
UniRef50_Q1E273 Cluster: Putative uncharacterized protein; n=2; ... 40 0.058
UniRef50_A5DIX5 Cluster: ATP-dependent RNA helicase ROK1; n=2; P... 40 0.058
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 40 0.058
UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 40 0.058
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 40 0.058
UniRef50_UPI0000DB72AE Cluster: PREDICTED: similar to CG9143-PA;... 39 0.077
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 39 0.077
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 39 0.077
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 39 0.077
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 39 0.077
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 39 0.077
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 39 0.077
UniRef50_Q23U17 Cluster: Putative uncharacterized protein; n=1; ... 39 0.077
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 39 0.077
UniRef50_Q17BQ3 Cluster: Putative uncharacterized protein; n=1; ... 39 0.077
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 39 0.077
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 39 0.077
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 39 0.077
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 39 0.077
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 39 0.10
UniRef50_UPI0000498707 Cluster: DEAD/DEAH box helicase; n=1; Ent... 39 0.10
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 39 0.10
UniRef50_Q8A8L3 Cluster: ATP-independent RNA helicase; n=7; Bact... 39 0.10
UniRef50_Q6MN90 Cluster: RNA helicase; n=1; Bdellovibrio bacteri... 39 0.10
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 39 0.10
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 39 0.10
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 39 0.10
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 39 0.10
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 39 0.10
UniRef50_Q54TD7 Cluster: Putative uncharacterized protein; n=1; ... 39 0.10
UniRef50_Q96XQ7 Cluster: 337aa long hypothetical ATP-dependent R... 39 0.10
UniRef50_Q4P9E5 Cluster: ATP-dependent rRNA helicase SPB4; n=2; ... 39 0.10
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 39 0.10
UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1; S... 39 0.10
UniRef50_Q7RZH4 Cluster: ATP-dependent RNA helicase mak-5; n=1; ... 39 0.10
UniRef50_P36120 Cluster: ATP-dependent RNA helicase DBP7; n=5; S... 39 0.10
UniRef50_O60173 Cluster: ATP-dependent RNA helicase dbp7; n=1; S... 39 0.10
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 39 0.10
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 39 0.10
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 38 0.13
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 38 0.13
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 38 0.13
UniRef50_Q2J919 Cluster: Helicase-like; n=3; Frankia|Rep: Helica... 38 0.13
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 116 bits (280), Expect = 3e-25
Identities = 52/67 (77%), Positives = 60/67 (89%), Gaps = 1/67 (1%)
Frame = +2
Query: 56 DGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRD 232
+GP GMDP G ++T+WD VV+ FDDMNLKE LLRG+YAYGFEKPSAIQQRAI+PCI+G D
Sbjct: 10 NGPEGMDPDGVIETNWDTVVDNFDDMNLKESLLRGVYAYGFEKPSAIQQRAILPCIKGHD 69
Query: 233 VIAQAQS 253
VIAQAQS
Sbjct: 70 VIAQAQS 76
Score = 61.7 bits (143), Expect = 1e-08
Identities = 31/40 (77%), Positives = 35/40 (87%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKV 375
TGKTATF ISILQ+IDTS++E ALILAPTRELAQQ K+
Sbjct: 78 TGKTATFVISILQRIDTSLKETQALILAPTRELAQQEWKL 117
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 113 bits (273), Expect = 2e-24
Identities = 53/78 (67%), Positives = 65/78 (83%), Gaps = 2/78 (2%)
Frame = +2
Query: 26 NGPSKDQG-SYDGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQ 199
+G S D + GP GMDP G ++++W+++V+ FDDMNLKE LLRGIYAYGFEKPSAIQQ
Sbjct: 2 SGGSADYNREHGGPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQ 61
Query: 200 RAIMPCIQGRDVIAQAQS 253
RAI+PCI+G DVIAQAQS
Sbjct: 62 RAIIPCIKGYDVIAQAQS 79
Score = 103 bits (247), Expect = 3e-21
Identities = 51/88 (57%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKTATF+ISILQQ++ +E AL+LAPTRELAQQIQKV++ALGD++ A CHACIGGT
Sbjct: 81 TGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTN 140
Query: 436 SVKIFANWRLVFMLLWV-TPGRVYDLIN 516
+ + V TPGRV+D++N
Sbjct: 141 VRNEMQKLQAEAPHIVVGTPGRVFDMLN 168
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 110 bits (265), Expect = 2e-23
Identities = 52/74 (70%), Positives = 62/74 (83%), Gaps = 1/74 (1%)
Frame = +2
Query: 35 SKDQGSYDGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIM 211
SKD G GP GM+P G ++++W ++ + FDDMNLKE LLRGIYAYGFEKPSAIQQRAI+
Sbjct: 11 SKDHG---GPDGMEPDGIIESNWTEITDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAII 67
Query: 212 PCIQGRDVIAQAQS 253
PCI+G DVIAQAQS
Sbjct: 68 PCIKGYDVIAQAQS 81
Score = 55.2 bits (127), Expect = 1e-06
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQ 363
TGKTATF+ISILQQ++ +E AL+LAPTRELAQQ
Sbjct: 83 TGKTATFAISILQQLEIDQKETQALVLAPTRELAQQ 118
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 100 bits (239), Expect = 3e-20
Identities = 50/86 (58%), Positives = 63/86 (73%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKTATFSIS+LQ +D +RE ALILAPTRELA QIQK ++ALGD++N +CHACIGGT
Sbjct: 86 TGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTN 145
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLI 513
+ ++ TPGRV+D+I
Sbjct: 146 VGEDIRKLDYGQHVVAGTPGRVFDMI 171
Score = 79.8 bits (188), Expect = 4e-14
Identities = 38/49 (77%), Positives = 42/49 (85%)
Frame = +2
Query: 107 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
V TFD M L+E+LLRGIYAYGFEKPSAIQQRAI I+GRDVIAQ+QS
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQS 84
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 82.6 bits (195), Expect = 6e-15
Identities = 41/82 (50%), Positives = 58/82 (70%), Gaps = 6/82 (7%)
Frame = +2
Query: 92 TDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEK-- 265
T+ +++ +FD M +K +LLRGIYAY FEKPSA+QQRA++P IQG DVIAQAQS K
Sbjct: 269 TEGVELIMSFDQMGIKNDLLRGIYAYSFEKPSAVQQRAVLPIIQGHDVIAQAQSGTGKTS 328
Query: 266 -LLLSLYRFY---NKSIQAFVN 319
L++Y+ N+ +QA ++
Sbjct: 329 MFALTVYQMVDTSNREVQALIS 350
Score = 66.1 bits (154), Expect = 6e-10
Identities = 28/53 (52%), Positives = 41/53 (77%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCH 414
TGKT+ F++++ Q +DTS RE ALI +PTRELA Q +KV++A+GD +N + H
Sbjct: 324 TGKTSMFALTVYQMVDTSNREVQALISSPTRELASQTEKVILAIGDSVNIQAH 376
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 80.6 bits (190), Expect = 3e-14
Identities = 35/56 (62%), Positives = 47/56 (83%)
Frame = +2
Query: 86 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
L +W + VETF+D+ L ++LLRGI++YGFE+PSAIQQ+AI P I G+DV+AQAQS
Sbjct: 47 LQENWIEQVETFEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILGKDVLAQAQS 102
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/86 (43%), Positives = 54/86 (62%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKT TF+I LQ+ID + R+ +ILAP RELA+QI VV +G +LN + CIGGT
Sbjct: 104 TGKTGTFTIGALQRIDPNQRKTQVIILAPVRELAKQIYDVVKGIGQYLNIEAFCCIGGTS 163
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLI 513
+ + + ++ TPGR+ D++
Sbjct: 164 TQETREKCKQGVHIIIATPGRLIDMM 189
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 79.8 bits (188), Expect = 4e-14
Identities = 38/49 (77%), Positives = 42/49 (85%)
Frame = +2
Query: 107 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
V TFD M L+E+LLRGIYAYGFEKPSAIQQRAI I+GRDVIAQ+QS
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQS 84
Score = 48.8 bits (111), Expect = 9e-05
Identities = 34/86 (39%), Positives = 47/86 (54%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKTATFS+S+LQ +D IQ + +ALGD++N +CHACIGGT
Sbjct: 86 TGKTATFSVSVLQCLD--------------------IQGL-LALGDYMNVQCHACIGGTN 124
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLI 513
+ ++ TPGRV+D+I
Sbjct: 125 VGEDIRKLDYGQHVVAGTPGRVFDMI 150
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 77.0 bits (181), Expect = 3e-13
Identities = 35/48 (72%), Positives = 43/48 (89%)
Frame = +2
Query: 110 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
V++F+ M L E LLRGI+AYGFEKPSAIQQ+AI+PCI+G DVIAQ+QS
Sbjct: 20 VDSFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIKGFDVIAQSQS 67
Score = 55.6 bits (128), Expect = 8e-07
Identities = 27/43 (62%), Positives = 34/43 (79%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIA 384
TGKTAT+ I+ LQ+ID + A+ILAPTRELA QIQKVV++
Sbjct: 69 TGKTATYVIAALQRIDMMKEDTQAIILAPTRELANQIQKVVLS 111
>UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 339
Score = 76.6 bits (180), Expect = 4e-13
Identities = 35/53 (66%), Positives = 43/53 (81%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCH 414
TGKTATF ILQQ++ + +C AL+LAPTRELAQQI+KV+ ALGDHLN K +
Sbjct: 60 TGKTATFCSGILQQLNEELTQCQALVLAPTRELAQQIEKVMRALGDHLNVKIY 112
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/43 (51%), Positives = 27/43 (62%)
Frame = +2
Query: 125 DMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
D N+ L + G EKPSAIQQ+ I+P +G DVI QAQS
Sbjct: 16 DSNMNGLCLLNVLCEGIEKPSAIQQKGIVPFCKGLDVIQQAQS 58
>UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = +2
Query: 128 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
M LKE LLRGIYAYG EKPSAIQQ+ I+P +G DVI QAQS
Sbjct: 1 MGLKENLLRGIYAYGIEKPSAIQQKGIVPFCKGLDVIQQAQS 42
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 65.3 bits (152), Expect = 1e-09
Identities = 30/55 (54%), Positives = 41/55 (74%)
Frame = +2
Query: 89 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
D+ ++ +T++D LKE+LL+GIY+ GFE PS IQ+ AI P I GRD+ AQAQS
Sbjct: 30 DSSQIRMFDTWEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQS 84
Score = 39.5 bits (88), Expect = 0.058
Identities = 29/87 (33%), Positives = 40/87 (45%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKT F+++ LQ D S L+LA TRE+A Q LG + A+ GG+
Sbjct: 86 TGKTGAFAVAALQICDMSQDVTQILVLASTREIAAQNAARFEDLGCFMGARVALLSGGSP 145
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLIN 516
++ TPGRV +IN
Sbjct: 146 IAADKVALEKKPHIVVGTPGRVEHMIN 172
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 62.5 bits (145), Expect = 7e-09
Identities = 35/85 (41%), Positives = 43/85 (50%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKTA F I L+++ + + ALI+ PTRELA Q +VV LG H C GGT
Sbjct: 94 TGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTN 153
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDL 510
+L TPGRV DL
Sbjct: 154 LRDDILRLNETVHILVGTPGRVLDL 178
Score = 56.8 bits (131), Expect = 4e-07
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
TF+D LK ELL GI+ GFEKPS IQ+ AI I GRD++A+A++
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKN 92
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 61.7 bits (143), Expect = 1e-08
Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQ-IQKVVIALGDHLNAKCHACIGGT 432
TGKTATFSI+ LQ IDTS ALILAPTRELAQQ I ++ LG +L + +
Sbjct: 82 TGKTATFSIATLQVIDTSSPHTQALILAPTRELAQQTITRIFFILGVNLKRNNLSLLEKV 141
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLINF-VRALHAKHHQTF 555
++ + ++ L+++ + +Y+L + + L AK+ + F
Sbjct: 142 QYIREYLSFTLLYVTEQSSERSLYNLNSIAINYLAAKYQEYF 183
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +2
Query: 152 RGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+ + +YGFEKPS IQQ I+P I+G+D IAQAQS
Sbjct: 47 QNVLSYGFEKPSPIQQCGIIPIIKGKDTIAQAQS 80
Score = 35.5 bits (78), Expect = 0.95
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +1
Query: 367 QKVVIALGDHLNAKCHACIGGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
+KV++ LG+ L +AC GGT + R ++ TPGRV DLI
Sbjct: 186 KKVIMYLGEFLKVSAYACTGGTDPKEDRKRLREGVQVVVGTPGRVLDLI 234
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 61.3 bits (142), Expect = 2e-08
Identities = 38/100 (38%), Positives = 52/100 (52%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKTA F+I IL +D SI L++APTRELA QI + LG + +K +GG
Sbjct: 49 TGKTAAFAIPILSNLDCSINRIQHLVIAPTRELANQIYDQLNILGKYTCSKIALILGGVS 108
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLINFVRALHAKHHQTF 555
K A ++ TPGR+ DL+ + H +TF
Sbjct: 109 YEKQKAALNSGVNIVVATPGRLEDLL-AQNKIDLSHIKTF 147
Score = 46.8 bits (106), Expect = 4e-04
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
F MN+K E+L+ + GFEKP+ IQ+ + +G+D+I QAQ+
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEGKDIIGQAQT 47
>UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 395
Score = 61.3 bits (142), Expect = 2e-08
Identities = 26/46 (56%), Positives = 36/46 (78%)
Frame = +2
Query: 107 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQ 244
+ TF+ M L++ELLRGI A+GF +P +QQRA++P IQGRDV+ Q
Sbjct: 20 IQSTFESMKLRKELLRGINAFGFIRPLEVQQRALVPLIQGRDVVIQ 65
Score = 56.8 bits (131), Expect = 4e-07
Identities = 29/86 (33%), Positives = 47/86 (54%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKT S+S+L D S+++ LIL TR+L ++ +++ALG LN HAC G
Sbjct: 70 TGKTTVMSLSVLSIFDLSVKKIQVLILQKTRKLTEENAGLIMALGKFLNVSIHACSEGNS 129
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLI 513
+ + ++ TP RV++L+
Sbjct: 130 IQDDISVVQQGVQIVLGTPDRVFELV 155
>UniRef50_UPI0000F2BC8C Cluster: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1,; n=2;
Theria|Rep: PREDICTED: similar to eukaryotic translation
initiation factor 4A, isoform 1, - Monodelphis domestica
Length = 59
Score = 60.5 bits (140), Expect = 3e-08
Identities = 25/49 (51%), Positives = 34/49 (69%)
Frame = +2
Query: 80 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG 226
G +++DW+++V++FDDMNL E LL GIYAYGFEK CI+G
Sbjct: 10 GVIESDWNEIVDSFDDMNLSESLLCGIYAYGFEKAICHSVTCNSSCIKG 58
>UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor
4A-2; n=5; Oryza sativa|Rep: Putative eukaryotic
initiation factor 4A-2 - Oryza sativa subsp. japonica
(Rice)
Length = 416
Score = 60.1 bits (139), Expect = 4e-08
Identities = 28/58 (48%), Positives = 36/58 (62%)
Frame = +1
Query: 259 GKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 432
G T T ILQ++D + EC AL+L PT +LA + Q V+ LG L+AK HA GGT
Sbjct: 95 GTTVTLCCGILQRLDYASTECQALVLVPTHDLAHETQNVIGVLGQFLSAKAHAFCGGT 152
Score = 33.5 bits (73), Expect = 3.8
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 107 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 247
+V T + E L+ +KPSA+ QR I+P G D+I Q+
Sbjct: 46 IVTTQGAQFISESLIGETQTKDLDKPSAVHQRGIVPLCNGLDIIQQS 92
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 60.1 bits (139), Expect = 4e-08
Identities = 37/86 (43%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGT 432
TGKTA+F I L +I+TS+ ALIL PTRELA Q +V LG H+ N + GGT
Sbjct: 84 TGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGT 143
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDL 510
+ +L TPGR+ DL
Sbjct: 144 TLRDDILRLQQPVHILVGTPGRILDL 169
Score = 57.2 bits (132), Expect = 3e-07
Identities = 30/70 (42%), Positives = 42/70 (60%)
Frame = +2
Query: 44 QGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ 223
QG P + P T D Q F+D L+ ELL GIY GFE+PS IQ++AI +
Sbjct: 14 QGLAAPPKDLRPQTEDVTATQG-SRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALT 72
Query: 224 GRDVIAQAQS 253
GRD++A+A++
Sbjct: 73 GRDILARAKN 82
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 59.7 bits (138), Expect = 5e-08
Identities = 36/87 (41%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGT 432
TGKTA F + +L ID + RE ALILAPTRELAQQI + + HL GG
Sbjct: 62 TGKTAAFGLPLLDLIDVNSREVQALILAPTRELAQQICGQMEQMSKHLGKLNVVPVFGGA 121
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLI 513
+ + R ++ TPGR+ DL+
Sbjct: 122 NIMNQIRDIRRGAQIIVATPGRLMDLM 148
Score = 32.7 bits (71), Expect = 6.7
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Frame = +2
Query: 110 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSELEKL------ 268
++ F+ + L + LL G+ GFE P+ IQQ++I ++ D I AQ+ K
Sbjct: 12 LKNFEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLP 71
Query: 269 LLSLYRFYNKSIQAFV 316
LL L ++ +QA +
Sbjct: 72 LLDLIDVNSREVQALI 87
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 59.7 bits (138), Expect = 5e-08
Identities = 35/98 (35%), Positives = 53/98 (54%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
+GKTA F+I ILQ + T+ + AL+LAPTRELA QI++ ALG + + IGG
Sbjct: 146 SGKTAAFAIPILQTLYTAAQPYYALVLAPTRELAFQIKETFDALGSSMGLRSVCIIGGMS 205
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLINFVRALHAKHHQ 549
++ + ++ TPGR+ D + + K Q
Sbjct: 206 MMEQARDLMRKPHVIIATPGRLIDHLEHTKGFSLKKLQ 243
Score = 37.1 bits (82), Expect = 0.31
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +2
Query: 110 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
V++F + +L ELL I + + +P+ IQ AI +QG+D++ A++
Sbjct: 97 VQSFTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGIAET 144
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 58.8 bits (136), Expect = 9e-08
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKTA F + +LQ+ID + R AL+L PTRELA Q+ + AL HL + G
Sbjct: 53 TGKTAAFGLPLLQRIDAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQ 112
Query: 436 SVKIFAN-WRLVFMLLWVTPGRVYDLIN 516
++ A+ R ++ TPGR+ D IN
Sbjct: 113 PIEPQASALRRGAQVVVGTPGRILDHIN 140
Score = 52.8 bits (121), Expect = 6e-06
Identities = 26/48 (54%), Positives = 34/48 (70%)
Frame = +2
Query: 110 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
VE+F D+ L+EELL+ I GF +PS IQ AI ++GRDVI QAQ+
Sbjct: 4 VESFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQT 51
>UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 561
Score = 58.8 bits (136), Expect = 9e-08
Identities = 35/86 (40%), Positives = 45/86 (52%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKT F+I ILQ++ ALIL PTRELA QI + ALG + KC +GG
Sbjct: 137 TGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRS 196
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLI 513
+ ++ TPGR+ DLI
Sbjct: 197 LIHQARELSERPHVVVATPGRLADLI 222
>UniRef50_UPI00005A557C Cluster: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1; n=1; Canis
lupus familiaris|Rep: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1 - Canis
familiaris
Length = 430
Score = 58.4 bits (135), Expect = 1e-07
Identities = 32/52 (61%), Positives = 35/52 (67%)
Frame = +1
Query: 220 PRTRCYRSSPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKV 375
P R SP TG TATF+ISILQQID ++ A LAPTR LAQQIQKV
Sbjct: 177 PCLRYISCSPSGTGNTATFAISILQQIDLDLKATKASGLAPTRVLAQQIQKV 228
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 58.4 bits (135), Expect = 1e-07
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGT 432
TGKTA F + +LQQI+ S+++ L+L PTREL QQ+ K + ++ A GG
Sbjct: 50 TGKTAAFGLPVLQQINPSLQQTQVLVLVPTRELGQQVAKDLFVFSRYIVRIHTEAVYGGK 109
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLI 513
+ +L TPGR+ DLI
Sbjct: 110 KIEEQIKKLETPKHILVATPGRLLDLI 136
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 58.0 bits (134), Expect = 2e-07
Identities = 35/103 (33%), Positives = 52/103 (50%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
S +GKTAT +I I +++T + + ALI+ PTRELA Q +G + K A
Sbjct: 59 SQTGSGKTATCAIPICNRVNTELTDIQALIIVPTRELALQYATETQKIGKYKGVKAFAIF 118
Query: 424 GGTMSVKIFANWRLVFMLLWVTPGRVYDLINFVRALHAKHHQT 552
GG S + + +L TPGR+ D I + R + H +T
Sbjct: 119 GGEDSALQQSKLKHGVQVLVATPGRLIDFI-YSRQIDLSHVET 160
>UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6;
Bacteroidetes|Rep: ATP-dependent RNA helicase -
Polaribacter irgensii 23-P
Length = 447
Score = 58.0 bits (134), Expect = 2e-07
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKTA F + +LQ ID + A+ILAPTREL QQI +I+ +H + A + G +
Sbjct: 52 TGKTAAFGLPLLQLIDVNNDAIQAIILAPTRELGQQIAANLISFAEHTSQVSIATLCGGI 111
Query: 436 SVK-IFANWRLVFMLLWVTPGRVYDLI 513
+K + ++ TPGR+ DL+
Sbjct: 112 PIKPQIERLKEATHIIVATPGRLADLV 138
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 58.0 bits (134), Expect = 2e-07
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAK--CHACIGG 429
TGKTA F + +L ID + ALIL+PTREL QQI+K + +++ + A GG
Sbjct: 51 TGKTAAFGLPVLHHIDANSDHIQALILSPTRELVQQIKKQLFKFTKYVDDRIFLEAVFGG 110
Query: 430 TMSVKIFANWRLVFMLLWVTPGRVYDLI 513
+ N + ++ TPGR+ DLI
Sbjct: 111 EKIDRQMNNLKRTTHIVIATPGRLIDLI 138
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 57.6 bits (133), Expect = 2e-07
Identities = 34/90 (37%), Positives = 46/90 (51%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
S TGKTA F+I IL++I R AL++ PTRELA Q+ + AL H + A
Sbjct: 64 SKTGTGKTAAFAIPILERIADGRRRPSALVMCPTRELAIQVAQEFTALAKHRDLSVVAVY 123
Query: 424 GGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
GG + ++ TPGR+YD I
Sbjct: 124 GGASMGEQLQKLEAGAEIIVGTPGRIYDHI 153
Score = 39.5 bits (88), Expect = 0.058
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+FD++ L E + R I +G+E+P+ +Q P G+DVI ++++
Sbjct: 21 SFDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKT 66
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 57.2 bits (132), Expect = 3e-07
Identities = 40/104 (38%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSI------RECXALILAPTRELAQQIQKVVIALGDHLNAKCHA 417
TGKTA F+I ILQ + R+ AL+LAPTRELA QI + A G +L +
Sbjct: 49 TGKTAAFAIPILQSLAMGQGLLKGKRQIRALVLAPTRELATQIAESFTAYGVNLPLRTLV 108
Query: 418 CIGGTMSVKIFANWRLVFMLLWVTPGRVYDLIN--FVRALHAKH 543
GG +L TPGR+ DLIN F+ H +H
Sbjct: 109 IFGGVGQAPQTRKLEKGIDILVATPGRLLDLINQGFIDLSHVEH 152
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 56.8 bits (131), Expect = 4e-07
Identities = 30/84 (35%), Positives = 45/84 (53%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKTA F + I++++ R AL+L PTRELA Q+ + + +G H K A GG
Sbjct: 54 TGKTAAFGVPIVERLVPGQRAVQALVLTPTRELAIQVAEEITKIGRHARVKTIAIYGGQS 113
Query: 436 SVKIFANWRLVFMLLWVTPGRVYD 507
+ + R ++ TPGR+ D
Sbjct: 114 IERQIRSLRFGVDVVIGTPGRILD 137
Score = 49.6 bits (113), Expect = 5e-05
Identities = 23/46 (50%), Positives = 33/46 (71%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
TF D+ L E++L+ + GFE+PS IQ +AI +QG+DVI QAQ+
Sbjct: 7 TFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQT 52
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 56.8 bits (131), Expect = 4e-07
Identities = 34/87 (39%), Positives = 45/87 (51%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKTA F I IL+ ID S R ALILAPTRELA Q+ + + ++ GG
Sbjct: 51 TGKTAAFGIPILETIDESSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQS 110
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLIN 516
+ R ++ TPGR+ D I+
Sbjct: 111 IDRQIRELRRGVQIVVGTPGRILDHIS 137
Score = 41.5 bits (93), Expect = 0.014
Identities = 19/49 (38%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Frame = +2
Query: 110 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQS 253
+E+F ++ L +E+L + GF P+ IQ++AI I+G RD++ QAQ+
Sbjct: 1 MESFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQT 49
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 56.4 bits (130), Expect = 5e-07
Identities = 35/91 (38%), Positives = 45/91 (49%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
S TGKTA F + +L++I R ALIL PTRELA Q+ + L H K A
Sbjct: 73 SKTGTGKTAAFGLPLLEKIPADERRVRALILCPTRELALQVADELKMLAKHKGLKIAAIY 132
Query: 424 GGTMSVKIFANWRLVFMLLWVTPGRVYDLIN 516
GG + ++ TPGRV+D IN
Sbjct: 133 GGASMKQQEDALEEGTPIIVGTPGRVFDHIN 163
Score = 43.6 bits (98), Expect = 0.004
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
FDDMNL E + + G+ P+ +Q RA P I+G+D+I ++++
Sbjct: 31 FDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKT 75
>UniRef50_A3J7I3 Cluster: ATP-independent RNA helicase; n=5;
Bacteroidetes|Rep: ATP-independent RNA helicase -
Flavobacteria bacterium BAL38
Length = 463
Score = 56.4 bits (130), Expect = 5e-07
Identities = 34/90 (37%), Positives = 46/90 (51%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
SP +GKT F + I Q ++ ++ LIL P+REL QI++V +G H K + C
Sbjct: 40 SPTGSGKTLAFLLPIFQMMEEEVKGVQCLILVPSRELGLQIEQVWKKMGTHF--KVNTCY 97
Query: 424 GGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
GG F N LL TPGR+ D I
Sbjct: 98 GGHSIETEFKNLSNPPALLIGTPGRIADHI 127
>UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1117
Score = 56.0 bits (129), Expect = 6e-07
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGT 432
TGKT FS+ L+ ID + LILAPTRE+A QIQ + A+G + + H IGGT
Sbjct: 14 TGKTCVFSVIALEGIDLTNPSTQVLILAPTREIAVQIQDTIRAIGCEMEGLRSHVFIGGT 73
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLINF 519
+ + + + TPGR+ LI +
Sbjct: 74 LFGPDRQKLKKCHIAVG-TPGRIKQLIEY 101
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 56.0 bits (129), Expect = 6e-07
Identities = 28/86 (32%), Positives = 47/86 (54%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKTA F I +++ ID+++++ AL+L+PTRELA Q+ + + LG + GG
Sbjct: 93 TGKTAAFGIPLIENIDSTVKDTQALVLSPTRELALQVAEQLTLLGKKKGVRVVTIYGGAS 152
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLI 513
+ ++ TPGR+ D +
Sbjct: 153 YRTQIDGIKRGAHIVVATPGRLVDFL 178
>UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;
n=7; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
36 - Oryza sativa subsp. japonica (Rice)
Length = 501
Score = 56.0 bits (129), Expect = 6e-07
Identities = 35/87 (40%), Positives = 47/87 (54%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
+GKTA F++ IL ++ AL LAPTRELA Q+ + ALG L +C A IGG
Sbjct: 125 SGKTAAFALPILHRLGEDPYGVAALALAPTRELAAQLAEQFRALGAPLGLRCLAAIGGFD 184
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLIN 516
S+ ++ TPGR+ LIN
Sbjct: 185 SLGQAKGLARRPHVVVATPGRIATLIN 211
Score = 34.3 bits (75), Expect = 2.2
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +2
Query: 107 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
V TF ++ L + L+ + G P+A+Q+R I ++GRDV+ A++
Sbjct: 75 VPSTFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAET 123
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 56.0 bits (129), Expect = 6e-07
Identities = 31/86 (36%), Positives = 51/86 (59%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKTA F++++L ++D +I A+ +AP+RELA+QIQ+V+ +G I G+
Sbjct: 198 TGKTAAFTLNMLSRVDPTIPTPQAICIAPSRELARQIQEVIDQIGQFTQVGTFLAIPGSW 257
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLI 513
S N R+ +L TPG + D++
Sbjct: 258 S----RNSRIDKQILIGTPGTLVDML 279
Score = 47.6 bits (108), Expect = 2e-04
Identities = 22/50 (44%), Positives = 37/50 (74%), Gaps = 2/50 (4%)
Frame = +2
Query: 110 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQS 253
V++F ++NL E+L++GI A GF+KPS IQ++A+ + R++I Q+QS
Sbjct: 147 VQSFKELNLHEDLMKGIIAAGFQKPSKIQEKALPLLLSNPPRNLIGQSQS 196
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 55.2 bits (127), Expect = 1e-06
Identities = 32/90 (35%), Positives = 47/90 (52%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
+P TGKTA + + +LQ+I ++ LI+ PTRELA Q+ V LG +L + A
Sbjct: 46 APTGTGKTAAYLLPVLQRIQRG-KKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVY 104
Query: 424 GGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
GG + R ++ TPGR+ D I
Sbjct: 105 GGQAIERQIRGLRQGVEVIVGTPGRILDHI 134
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 55.2 bits (127), Expect = 1e-06
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGT 432
TGKTA F I ++Q DT ++ AL+L PTREL Q+ + +G ++ K GG
Sbjct: 51 TGKTAAFGIPLIQLTDTRLKRTQALVLCPTRELCVQVAGDLNLMGRYVQKLKIVPVYGGA 110
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLI 513
V R ++ TPGR++DLI
Sbjct: 111 SIVSQTEELRKGAQVVVATPGRLHDLI 137
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 55.2 bits (127), Expect = 1e-06
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDH-LNAKCHACIGGT 432
TGKTA F++ +L + +RE L+LAPTRELAQQ+ V + H N K + GG+
Sbjct: 54 TGKTAAFTLPLLARTQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGS 113
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLI 513
F + + TPGRV D I
Sbjct: 114 DFGSQFRALKQGPQWVVGTPGRVMDHI 140
Score = 39.5 bits (88), Expect = 0.058
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
F + L LLR I G+E+PS IQ+++I ++G+DV+ AQ+
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQT 52
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 55.2 bits (127), Expect = 1e-06
Identities = 39/89 (43%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHAC-IGGT 432
TGKT FSI +L +ID S + AL+LAPTRELA QI V +G + A IGG
Sbjct: 141 TGKTGAFSIGVLSKIDVSQKTTQALVLAPTRELATQIFNVFKEIGSRIPGLDIAIFIGGA 200
Query: 433 MSVKIFANWRLVF--MLLWVTPGRVYDLI 513
V + A R + TPGR DLI
Sbjct: 201 QRV-VDAQARAASHPHICICTPGRALDLI 228
Score = 52.0 bits (119), Expect = 1e-05
Identities = 31/71 (43%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +2
Query: 50 SYDG-PPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--MPCI 220
SY+ P D +W V+ FD M+L LL+G+Y+YGF PS IQ AI +
Sbjct: 69 SYEAMTPAQDDPNFIPNWTTRVDDFDQMDLPPALLQGVYSYGFRAPSEIQAIAIGAIRDP 128
Query: 221 QGRDVIAQAQS 253
R VIAQAQS
Sbjct: 129 SNRHVIAQAQS 139
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 54.8 bits (126), Expect = 1e-06
Identities = 30/91 (32%), Positives = 46/91 (50%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
S +GKTA+F+I + + I+ ALI+ PTRELA Q++ + +G +C A
Sbjct: 47 SKTGSGKTASFAIPLCENINVDYNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIF 106
Query: 424 GGTMSVKIFANWRLVFMLLWVTPGRVYDLIN 516
G A + ++ TPGR+ D IN
Sbjct: 107 GKQSIKDQIAELKQRVHIVVATPGRILDHIN 137
>UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS; n=1; Encephalitozoon
cuniculi|Rep: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS - Encephalitozoon cuniculi
Length = 425
Score = 54.8 bits (126), Expect = 1e-06
Identities = 26/55 (47%), Positives = 36/55 (65%)
Frame = +2
Query: 107 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEKLL 271
V E F DM L +ELL+ IY GFEKPS IQ+ AI ++G +V+ Q++S K +
Sbjct: 49 VAEHFSDMGLSDELLKAIYNQGFEKPSLIQKSAIPHILRGHNVVVQSKSGTGKTI 103
Score = 32.3 bits (70), Expect = 8.8
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRE-CXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
TGKT ++ +L +T I E +++ PTREL+ Q+ +V+ L L K + +
Sbjct: 99 TGKTIAYTCGVLG--NTKIGERTQVMVVTPTRELSTQVTEVISGLAGPLGIKVFSAL 153
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 54.4 bits (125), Expect = 2e-06
Identities = 35/108 (32%), Positives = 54/108 (50%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
S TGKTA FS+ IL+++D + A++L PTRELA Q+ + + + A
Sbjct: 47 SQTGTGKTAAFSLPILERLDPQQKAVQAIVLTPTRELAIQVHDAMAQFVGNSGLRTLAIY 106
Query: 424 GGTMSVKIFANWRLVFMLLWVTPGRVYDLINFVRALHAKHHQTFWFLM 567
GG + + ++ TPGRV DL+ R + K Q WF++
Sbjct: 107 GGQSIDRQMLQLKRGVHIVVGTPGRVIDLLE--RG-NLKLDQVKWFVL 151
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 54.4 bits (125), Expect = 2e-06
Identities = 41/90 (45%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Frame = +1
Query: 256 TGKTATFSISILQQI-DTSIRE-CXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 429
TGKTA FSI ILQ++ T R+ AL+L PTRELA QI + A G + K HA I G
Sbjct: 49 TGKTAAFSIPILQKLYKTDHRKGIKALVLTPTRELAIQIGESFEAYGRYTGLK-HAVIFG 107
Query: 430 TMSVKIFAN-WRLVFMLLWVTPGRVYDLIN 516
+ K + R +L TPGR+ DLI+
Sbjct: 108 GVGQKPQTDALRSGIQILVATPGRLLDLIS 137
Score = 40.3 bits (90), Expect = 0.033
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEK-------LLL 274
TF+++NL E +L+ + G+ P+ IQ+++I +QG+D++ AQ+ K +L
Sbjct: 2 TFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 275 SLYRF-YNKSIQAFV 316
LY+ + K I+A V
Sbjct: 62 KLYKTDHRKGIKALV 76
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 54.4 bits (125), Expect = 2e-06
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGT 432
TGKTA F++ IL ID +R AL+L PTRELAQQ+ + + G + + + GG
Sbjct: 57 TGKTAAFALPILANIDVKVRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGA 116
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLI 513
+ + R ++ TPGR+ D I
Sbjct: 117 DMRQQLKSLREGTHIVVATPGRLLDHI 143
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 54.4 bits (125), Expect = 2e-06
Identities = 34/92 (36%), Positives = 48/92 (52%)
Frame = +1
Query: 241 SSPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHAC 420
S+ +GKTA+F+I IL Q+ A+IL PTRELA QI + A+G +N C
Sbjct: 47 SAKTGSGKTASFAIPILNQLSEDPYGVFAVILTPTRELAVQIGEQFNAIGAPMNVNCSVV 106
Query: 421 IGGTMSVKIFANWRLVFMLLWVTPGRVYDLIN 516
IGG +V ++ TPGR+ +N
Sbjct: 107 IGGIDNVTQALILDKRPHIIVATPGRLASHLN 138
Score = 37.1 bits (82), Expect = 0.31
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +2
Query: 113 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+TF+++ L L+ GF+ PS IQ I ++GRD+IA A++
Sbjct: 4 KTFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKT 50
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 54.4 bits (125), Expect = 2e-06
Identities = 31/86 (36%), Positives = 46/86 (53%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKTA F+I +L+ ++ R ALI+ PTREL Q+ + + +G ++ K A GG
Sbjct: 52 TGKTAAFAIPVLENLEAE-RVPQALIICPTRELCLQVSEEIKRIGKYMKVKVLAVYGGQS 110
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLI 513
A R ++ TPGR+ D I
Sbjct: 111 IGNQIAQLRRGVHVIVATPGRLIDHI 136
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 54.0 bits (124), Expect = 3e-06
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Frame = +1
Query: 256 TGKTATFSISILQQI----DTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
TGKTA F++ +LQ++ T ++ +LI+ PTRELA Q+ V LN + A
Sbjct: 49 TGKTAAFTLPLLQRLAAKQSTKVQGVRSLIVTPTRELAAQVAISVEIYSTQLNIRSFAVY 108
Query: 424 GGTMSVKIFANWRLVFMLLWVTPGRVYDLINFVRALHAKHHQTFWF 561
GG A + +L TPGR+ DL RALH ++ + F
Sbjct: 109 GGVRIEPQIAQLQEGVDVLIATPGRLLDLYE-QRALHFENLEILVF 153
>UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_139_12217_14094 - Giardia lamblia
ATCC 50803
Length = 625
Score = 54.0 bits (124), Expect = 3e-06
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Frame = +1
Query: 241 SSPVRTGKTATFSISILQQIDTSIRECX---ALILAPTRELAQQIQKVVIALGDHLNAKC 411
S+ +GKT F I +L+++ R+ ALIL+PTRELA Q V+ L N +
Sbjct: 44 SAVTGSGKTGAFGIPLLERMILRGRDTYGTTALILSPTRELAAQTAAVLQELAYFTNFRV 103
Query: 412 HACIGGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
+ IGGT + K A R ++ TPGR+ DL+
Sbjct: 104 YLLIGGTDTAKQAAQLRTEPDIIVATPGRLIDLV 137
>UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia ATCC
50803|Rep: GLP_397_1016_18 - Giardia lamblia ATCC 50803
Length = 332
Score = 54.0 bits (124), Expect = 3e-06
Identities = 36/111 (32%), Positives = 56/111 (50%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
+GKT F++ ILQ++ AL+L PTRELA QI++ + A G+ L + + IGG
Sbjct: 109 SGKTLCFALPILQELSQDPYGIFALVLTPTRELALQIEQQMNAYGNPLGIQAQSLIGGKD 168
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLINFVRALHAKHHQTFWFLMKLD*NVC 588
SV+ A +L TPGR+ ++ A + L + D +C
Sbjct: 169 SVEQSAILDSRPHILIATPGRLAYMLESAAAQRNFRRMKYLVLDEADRLLC 219
>UniRef50_A6SDG8 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 456
Score = 54.0 bits (124), Expect = 3e-06
Identities = 42/119 (35%), Positives = 52/119 (43%), Gaps = 5/119 (4%)
Frame = +1
Query: 196 ATRNNALHPRTRCYRSSPVRTGKTATFSISILQQIDTSIRE----CXALILAPTRELAQQ 363
AT L R C + TGKT F I +Q + R L++ PTRELAQQ
Sbjct: 110 ATLRPLLSERADCLAQAKTGTGKTIAFLIPAIQTLINKQRRPQDGISLLVMTPTRELAQQ 169
Query: 364 IQKVVIALGDHL-NAKCHACIGGTMSVKIFANWRLVFMLLWVTPGRVYDLINFVRALHA 537
I K L L N K IGGT N +L TPGR++D +N R + A
Sbjct: 170 IAKEASQLLQRLPNYKVGFAIGGTNKTTEEKNILKGCNILIATPGRLFDHLNDERIIDA 228
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 53.6 bits (123), Expect = 3e-06
Identities = 37/91 (40%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGG- 429
TGKTA F I L+ ID I +ILAPTRE+A QI++V+ +LG + K + IGG
Sbjct: 72 TGKTAVFGIIALEMIDIKISSVQVIILAPTREIAIQIKEVIASLGCEIKGLKVESFIGGV 131
Query: 430 TMSV--KIFANWRLVFMLLWVTPGRVYDLIN 516
M + K +N + PGRV LI+
Sbjct: 132 AMDIDRKKLSNCHIAI----GAPGRVKHLID 158
Score = 38.3 bits (85), Expect = 0.13
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
TF M L +++L G+ GF KPS IQ ++I G D+I +A+S
Sbjct: 25 TFSQMGLSQQVLNGLLNCGFHKPSPIQHKSIPLGRCGFDLIVRAKS 70
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 53.6 bits (123), Expect = 3e-06
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGT 432
TGK+ + I +L++ID AL+L PTRELA Q+ ++ I + HL K A GGT
Sbjct: 137 TGKSGAYLIPMLERIDLKKDHIQALVLVPTRELALQVSQISIQIAKHLGGVKVMATTGGT 196
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLI 513
++ TPGR+ DL+
Sbjct: 197 NLRDDIMRLDETVHVVIATPGRILDLM 223
Score = 50.4 bits (115), Expect = 3e-05
Identities = 22/45 (48%), Positives = 33/45 (73%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
F+D LK ELL GI+ G+EKPS IQ+ +I + GRD++A+A++
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKN 135
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 53.6 bits (123), Expect = 3e-06
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALG-DHLNAKCHACIGGT 432
TGKTA F + L +IDTSI++ ++LAPTRELA Q+ + + + G D + GG
Sbjct: 63 TGKTAAFGLPALAKIDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQ 122
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYD 507
F ++ TPGR+ D
Sbjct: 123 SYGPQFQQLERGAQVVVGTPGRLMD 147
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 53.6 bits (123), Expect = 3e-06
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Frame = +1
Query: 256 TGKTATFSISILQQ-----IDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHAC 420
TGKTA F++ ++QQ I R A+IL+PTRELA QI + ++ G L
Sbjct: 151 TGKTAAFALPLIQQLLMNPIAIKGRSARAIILSPTRELALQIHEAFVSFGKRLPLNFTHA 210
Query: 421 IGGTMSVKIFANWRLVFMLLWVTPGRVYDLIN 516
IGG K + +L TPGR+ DL++
Sbjct: 211 IGGAPIRKQMRDLSKGVDILVATPGRLEDLVD 242
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 53.6 bits (123), Expect = 3e-06
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG-- 429
+GKTA F+I ILQ + + + A +LAPTRELA QI + V ALG + + +GG
Sbjct: 152 SGKTAAFTIPILQALWDNPKPFFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGMD 211
Query: 430 TMSVKIFANWRLVFMLLWVTPGRVYD 507
MS I + R ++ TPGR+ D
Sbjct: 212 MMSQSIALSKRP--HVIVATPGRLQD 235
Score = 37.9 bits (84), Expect = 0.18
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +2
Query: 17 DSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVET-FDDMNLKEELLRGIYAYGFEKPSAI 193
D + PS D+ S D + T D + F D+ + +++ GF+ P+ I
Sbjct: 71 DDDDDPSADKDSPAADEEQDEKKVATIADDGKKVEFSDLGVIPQIVEACTNMGFKHPTPI 130
Query: 194 QQRAIMPCIQGRDVIAQAQS 253
Q +AI +Q RDVI AQ+
Sbjct: 131 QVKAIPEALQARDVIGLAQT 150
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 53.2 bits (122), Expect = 4e-06
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHL-NAKCHAC 420
+P +GKTA F + +LQ++D ++ AL+L PTRELA Q+ K + L + N K
Sbjct: 70 APTGSGKTAAFGLGLLQKLDPALTRAQALVLCPTRELADQVGKQLRKLATGIPNMKLVVL 129
Query: 421 IGGTMSVKIFANWRLVFMLLWV-TPGRVYDLINFVRALH 534
GG A+ + V TPGR+ +L RALH
Sbjct: 130 TGGMPLGPQLASLEAHDPHVVVGTPGRIQELAR-KRALH 167
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 53.2 bits (122), Expect = 4e-06
Identities = 35/91 (38%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Frame = +1
Query: 256 TGKTATFSISILQQ-----IDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHAC 420
TGKTA FS+ I+ + ID + +LIL PTRELA QI + + D L K
Sbjct: 50 TGKTAAFSLPIINKFGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVV 109
Query: 421 IGGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
GG + L +L TPGR+ DLI
Sbjct: 110 YGGVGRQAQVDSIELGLDILVATPGRLLDLI 140
>UniRef50_Q1VPX9 Cluster: ATP-independent RNA helicase; n=9;
Bacteroidetes|Rep: ATP-independent RNA helicase -
Psychroflexus torquis ATCC 700755
Length = 443
Score = 53.2 bits (122), Expect = 4e-06
Identities = 35/94 (37%), Positives = 48/94 (51%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
SP TGKT FS+ +L +D + LIL P+RELA QI++V+ +G K +A
Sbjct: 41 SPTGTGKTLAFSLPLLTILDPESPDVQVLILVPSRELAIQIEQVIRTMGS--GYKVNAVY 98
Query: 424 GGTMSVKIFANWRLVFMLLWVTPGRVYDLINFVR 525
GG K + +L TPGR+ D N R
Sbjct: 99 GGRPVSKDKIEIKHNPAILIGTPGRILDHFNSER 132
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 53.2 bits (122), Expect = 4e-06
Identities = 35/88 (39%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSI---RECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIG 426
TGKT F+ ILQ++ I R +LIL PTRELA QIQ+ A G HL + G
Sbjct: 49 TGKTCAFAAPILQRLGGDIPAGRPIRSLILTPTRELALQIQESFEAYGKHLPLRSAVIFG 108
Query: 427 GTMSVKIFANWRLVFMLLWVTPGRVYDL 510
G + +L TPGR+ DL
Sbjct: 109 GVGQQPQVDKLKKGVDILVATPGRLLDL 136
Score = 48.4 bits (110), Expect = 1e-04
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
TF ++ L + +L+ + G+EKPS IQ++AI P + GRDV+ AQ+
Sbjct: 2 TFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQT 47
>UniRef50_P34640 Cluster: Probable ATP-dependent RNA helicase DDX55
homolog; n=2; Caenorhabditis|Rep: Probable ATP-dependent
RNA helicase DDX55 homolog - Caenorhabditis elegans
Length = 578
Score = 53.2 bits (122), Expect = 4e-06
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSI---RECXALILAPTRELAQQIQKVVIALGDHLNAKCH 414
SP +GKT F + +++ I + + ALIL+P+REL QI V+ + LN
Sbjct: 53 SPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKLNLTVE 112
Query: 415 ACIGG---TMSVKIFANWRLVFMLLWVTPGRVYDLINFVRALHAKHHQTFWFLM 567
GG ++K+F N + +L TPGR++ +I + L A+ +T L+
Sbjct: 113 TVTGGQKVDKNIKMFKNKNV--NILVATPGRLFQIIQHEKTLIARKMRTLQLLV 164
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 52.8 bits (121), Expect = 6e-06
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGT 432
TGKTA FS+ +L +++ S + A+++APTRELA Q+ + LG ++ K GG
Sbjct: 74 TGKTAAFSLPLLNKLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGA 133
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLINFVRALHAKHHQTF 555
+ + ++ TPGRV DLI R LH TF
Sbjct: 134 SILDQMRALKSGAHIVVGTPGRVKDLITRDR-LHLDECHTF 173
Score = 35.9 bits (79), Expect = 0.72
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
F D+ L +L + GF P+ IQ AI ++GRD + +AQ+
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQT 72
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 52.8 bits (121), Expect = 6e-06
Identities = 38/91 (41%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECX-----ALILAPTRELAQQIQKVVIALGDHLNAKCHAC 420
TGKTA FS+ ILQ + R+ LIL PTRELA QI + + A HLN K
Sbjct: 52 TGKTAAFSLPILQNLSKHTRKIEPKSPRCLILTPTRELAIQIHENIEAYSKHLNMKHAVI 111
Query: 421 IGGT-MSVKIFANWRLVFMLLWVTPGRVYDL 510
GG + ++ A V +L+ TPGR+ DL
Sbjct: 112 FGGVGQNPQVRALQGGVDILI-ATPGRLMDL 141
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 52.8 bits (121), Expect = 6e-06
Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Frame = +1
Query: 256 TGKTATFSISILQQI---DTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIG 426
TGKTA F + LQ + R+ LILAPTRELA QI KVV LG H + + G
Sbjct: 49 TGKTAAFVLPALQFLLDDPRPSRKPRVLILAPTRELAFQIHKVVKQLGAHCPFESNVVTG 108
Query: 427 GTMSVKIFANWRLVFMLLWVTPGRVYDLIN 516
G S K + +L TPGR+ ++++
Sbjct: 109 GFASDKQLEILQSKIDILVATPGRLLNIMS 138
Score = 33.5 bits (73), Expect = 3.8
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 247
TF++++L +LL I + KP+ IQ AI + +DV+A A
Sbjct: 2 TFEELDLDPKLLTAIEEQHYHKPTPIQAEAIPEMLLSKDVLAGA 45
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 52.8 bits (121), Expect = 6e-06
Identities = 25/49 (51%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Frame = +2
Query: 110 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQS 253
V+TF+++ LK ELL+G+YA G+ KPS IQ+ A+ IQ ++IAQ+QS
Sbjct: 69 VKTFEELGLKPELLKGVYAMGYNKPSKIQEAALPIIIQSPNNLIAQSQS 117
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/51 (41%), Positives = 32/51 (62%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAK 408
TGKTA F++ +L +D SI A+ ++PT+ELA Q +V+ +G N K
Sbjct: 119 TGKTAAFTLGMLNCVDPSINAPQAICISPTKELALQTFEVISKIGQFSNIK 169
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 52.8 bits (121), Expect = 6e-06
Identities = 28/87 (32%), Positives = 45/87 (51%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKTA F + +L ++DT +++APTRELA Q+ + + +G H + GG
Sbjct: 50 TGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQD 109
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLIN 516
+ + ++ TPGR+ D IN
Sbjct: 110 INRQIRALKKHPHIIVGTPGRILDHIN 136
Score = 43.2 bits (97), Expect = 0.005
Identities = 18/46 (39%), Positives = 30/46 (65%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
TF ++ L + LL+ + + GFE+ + IQ I +QG+D+I QAQ+
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQT 48
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 52.4 bits (120), Expect = 8e-06
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGT 432
TGKTA F++ +L ++D RE L+LAPTRELAQQ+ + G + + + GG
Sbjct: 57 TGKTAAFALPLLSRLDLQRREPQVLVLAPTRELAQQVAASFVQYGRGVKGLEVLSLCGGQ 116
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYD 507
+ + R ++ TPGRV D
Sbjct: 117 EYREQLSGLRRGAQVIVGTPGRVID 141
Score = 41.5 bits (93), Expect = 0.014
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
TF +++L +L + G+E PS IQ + I ++GRDV+ QAQ+
Sbjct: 10 TFAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLGQAQT 55
>UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293|Rep: Superfamily II DNA and RNA helicase -
Leuconostoc mesenteroides subsp. mesenteroides (strain
ATCC 8293 /NCDO 523)
Length = 431
Score = 52.4 bits (120), Expect = 8e-06
Identities = 25/62 (40%), Positives = 38/62 (61%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
+P TGKT F + +L +IDT+++ LILAP++ELA Q +V G+ + A + I
Sbjct: 37 APTGTGKTLAFVLPVLSRIDTNLKRTQVLILAPSQELAMQTTQVAREWGNAVGASVASLI 96
Query: 424 GG 429
GG
Sbjct: 97 GG 98
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 52.4 bits (120), Expect = 8e-06
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Frame = +1
Query: 256 TGKTATFSISILQQI----DTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
TGKTA F++ +L+ + + + AL+L PTRELA Q+ + V G HL+ K
Sbjct: 53 TGKTAGFTLPLLEILSKGENAQSNQVRALVLTPTRELAAQVAESVKNYGQHLSLKSTVVF 112
Query: 424 GGTMSVKIFANWRLVFMLLWVTPGRVYDLIN 516
GG R +L TPGR+ DL N
Sbjct: 113 GGVKINPQMMALRRGADILIATPGRMMDLYN 143
Score = 40.3 bits (90), Expect = 0.033
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+F+ + L +L+ I G+ +PSAIQ +AI ++G+DV+A AQ+
Sbjct: 6 SFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQT 51
>UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia
intestinalis|Rep: GLP_15_13424_14974 - Giardia lamblia
ATCC 50803
Length = 516
Score = 52.4 bits (120), Expect = 8e-06
Identities = 23/45 (51%), Positives = 32/45 (71%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
F D NL+EE+L+ I + GFE PS +Q AI P ++ +DVI QA+S
Sbjct: 130 FSDFNLREEVLQAIISNGFESPSDVQSMAIPPALEHKDVICQAKS 174
>UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08663 protein - Schistosoma
japonicum (Blood fluke)
Length = 193
Score = 52.4 bits (120), Expect = 8e-06
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Frame = +2
Query: 110 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQS 253
V TF ++NLKE LL+GI A GF KPS IQ+RA+ I +++IAQ+QS
Sbjct: 75 VRTFQELNLKEPLLKGIAAMGFYKPSTIQERALSSLISDNPQNMIAQSQS 124
Score = 48.8 bits (111), Expect = 9e-05
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKV 375
TGKTATF +++L +I T + C L +APTRELA QI+ V
Sbjct: 126 TGKTATFLLAMLSRIRTDVHYCQCLCMAPTRELALQIESV 165
>UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Rep:
DEAD-box helicase 2 - Plasmodium falciparum
Length = 562
Score = 52.4 bits (120), Expect = 8e-06
Identities = 34/100 (34%), Positives = 50/100 (50%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
S +GKTA F I ILQ + + + AL+++PTREL QI + ALG +L
Sbjct: 200 SETGSGKTACFIIPILQDLKVNKQSFYALVISPTRELCIQISQNFQALGMNLLINICTIY 259
Query: 424 GGTMSVKIFANWRLVFMLLWVTPGRVYDLINFVRALHAKH 543
GG V N ++ TPGR+ D +N + + K+
Sbjct: 260 GGVDIVTQSLNLAKKPNVIVSTPGRILDHLNNTKGFNLKN 299
Score = 37.1 bits (82), Expect = 0.31
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
TF+D+N+ EE+L I G++KP+ IQ+ + +D+I +++
Sbjct: 157 TFEDLNICEEILESIKELGWKKPTEIQREILPHAFLKKDIIGLSET 202
>UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111;
Eumetazoa|Rep: ATP-dependent RNA helicase DDX25 - Homo
sapiens (Human)
Length = 483
Score = 52.4 bits (120), Expect = 8e-06
Identities = 26/50 (52%), Positives = 38/50 (76%), Gaps = 2/50 (4%)
Frame = +2
Query: 110 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--MPCIQGRDVIAQAQS 253
V+TF+++ LKEELL+GIYA GF +PS IQ+ A+ M +++IAQ+QS
Sbjct: 96 VKTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQS 145
Score = 37.9 bits (84), Expect = 0.18
Identities = 22/58 (37%), Positives = 30/58 (51%)
Frame = +1
Query: 217 HPRTRCYRSSPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALG 390
HP S TGKTA F +++L +++ L LAPT ELA Q +VV +G
Sbjct: 134 HPPQNLIAQSQSGTGKTAAFVLAMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMG 191
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 52.0 bits (119), Expect = 1e-05
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGT 432
TGK+ + I +L+++D A+++ PTRELA Q+ ++ I + H+ AK A GGT
Sbjct: 129 TGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGT 188
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLI 513
++ TPGR+ DLI
Sbjct: 189 NLRDDVMRLDDTGHVVIATPGRILDLI 215
Score = 44.0 bits (99), Expect = 0.003
Identities = 21/45 (46%), Positives = 33/45 (73%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
F+D LK ELL GI+ G+E PS+IQ+ +I + GRD++A+A++
Sbjct: 84 FEDYCLKRELLIGIFEMGWE-PSSIQEESIPIALSGRDILARAKN 127
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVV 378
SP +GKT + + I Q+IDTS RE A+ILAPT ELA QI K +
Sbjct: 47 SPTGSGKTLAYLLPIFQKIDTSKREMQAIILAPTHELAMQINKEI 91
Score = 42.7 bits (96), Expect = 0.006
Identities = 20/64 (31%), Positives = 35/64 (54%)
Frame = +2
Query: 107 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEKLLLSLYR 286
++E+FD + L + L+ G+ G KP+ IQ + I ++ +DVI Q+ + K L L
Sbjct: 1 MIESFDKLGLNQNLIEGLKQEGINKPTDIQIKTIPLALENKDVIGQSPTGSGKTLAYLLP 60
Query: 287 FYNK 298
+ K
Sbjct: 61 IFQK 64
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 52.0 bits (119), Expect = 1e-05
Identities = 32/86 (37%), Positives = 42/86 (48%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKTA F + +L ID S + AL+LAPTRELAQQ+ + GG+
Sbjct: 103 TGKTAAFGLPLLNNIDFSKKCVQALVLAPTRELAQQVGDALATYSGDDGRNVLVVYGGSS 162
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLI 513
R ++ TPGR+ DLI
Sbjct: 163 YQAQVGGLRRGARVVVGTPGRLLDLI 188
Score = 46.0 bits (104), Expect = 7e-04
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEKL------LLS 277
+F D NLK +L+ + GF +P+ IQ++AI + G D+I QAQ+ K LL+
Sbjct: 56 SFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLN 115
Query: 278 LYRFYNKSIQAFV 316
F K +QA V
Sbjct: 116 NIDFSKKCVQALV 128
>UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=2;
Clostridium difficile|Rep: Putative ATP-dependent RNA
helicase - Clostridium difficile (strain 630)
Length = 381
Score = 52.0 bits (119), Expect = 1e-05
Identities = 38/94 (40%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Frame = +1
Query: 241 SSPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQI--QKVVIALGDHLNAKCH 414
+S TGKT + + I ++IDTS RE ALILAPT EL QI Q ++A L+
Sbjct: 45 NSQTGTGKTLAYLLPIFEKIDTSKRETQALILAPTHELVMQITNQVELLAKNAELSVTSL 104
Query: 415 ACIGGTMSVKIFANWRLVFMLLWV-TPGRVYDLI 513
A IG K N + V + + + GRV DLI
Sbjct: 105 ALIGEVNIQKQIKNIKAVKPHIVIGSCGRVLDLI 138
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 52.0 bits (119), Expect = 1e-05
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Frame = +2
Query: 110 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI--QGRDVIAQAQSELEKLLLSLY 283
V++F+D+ LK ELL GI + GF KPS+IQ+RA+ + Q +++IAQ+QS K L
Sbjct: 47 VKSFEDLQLKSELLNGISSMGFRKPSSIQERALPMLLENQPKNLIAQSQSGTGKTATFLL 106
Query: 284 RFYNK 298
+K
Sbjct: 107 TMLSK 111
Score = 49.6 bits (113), Expect = 5e-05
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLN 402
TGKTATF +++L +ID + C L +APTREL QI +V I + +N
Sbjct: 98 TGKTATFLLTMLSKIDVNDPFCQCLCMAPTRELVNQIAEVAIIMSKFMN 146
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 51.6 bits (118), Expect = 1e-05
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT- 432
TGKT F+I I++++ + AL+L PTRELA Q+++ + L + + GGT
Sbjct: 48 TGKTGAFAIPIVEKLQKGKPDVKALVLTPTRELAIQVKEQIYMLTKYKRLSSYVFYGGTS 107
Query: 433 --MSVKIFANWRLVFMLLWVTPGRVYDLIN 516
++ I N + ++ TPGR+ DLI+
Sbjct: 108 VKQNLDILQNKNVDILI--GTPGRIKDLID 135
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 51.6 bits (118), Expect = 1e-05
Identities = 38/103 (36%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Frame = +1
Query: 208 NALHPRTRCYRSSPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIAL 387
NA+H + ++ TGKTA F +S+L Q+ + L+L TRELA QI+ L
Sbjct: 71 NAIHGKDVLCQAK-AGTGKTAVFVLSVLNQLPDDAKPFSCLVLCHTRELAFQIKNEFKRL 129
Query: 388 GDHLNAKCHACIGGT-MSVKIFANWRLVFMLLWVTPGRVYDLI 513
G N K A GG SV I +L TPGR LI
Sbjct: 130 GKFTNFKVKAVYGGVEESVDIHTLKTKKPHILVATPGRCLSLI 172
Score = 49.6 bits (113), Expect = 5e-05
Identities = 22/61 (36%), Positives = 38/61 (62%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEKLLLSLYRFYN 295
+F+D +LK++LLR + GFE+PS +Q + I I G+DV+ QA++ K + + N
Sbjct: 39 SFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGKDVLCQAKAGTGKTAVFVLSVLN 98
Query: 296 K 298
+
Sbjct: 99 Q 99
>UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: ATP-dependent RNA
helicase - Entamoeba histolytica HM-1:IMSS
Length = 450
Score = 51.6 bits (118), Expect = 1e-05
Identities = 29/87 (33%), Positives = 46/87 (52%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
+GKTA F++ I+ + T AL+L PTRELA QI A G +N + +GG
Sbjct: 78 SGKTAAFALPIIHHLSTDPYTGFALVLTPTRELASQIADQFKAFGACINIRVVQVVGGVD 137
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLIN 516
++I + ++ TPG++ LI+
Sbjct: 138 VIRILHHLSGSPHVIIATPGKLVSLID 164
Score = 35.1 bits (77), Expect = 1.3
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 110 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+ TFD + +K+ LL + +G KP+ IQQ I P + +V+ A++
Sbjct: 29 LNTFDGLGIKQFLLPTLKQFGIIKPTKIQQLCIPPLLSFHNVLGGAET 76
>UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2;
Streptomyces|Rep: ATP-dependent RNA helicase -
Streptomyces coelicolor
Length = 740
Score = 51.6 bits (118), Expect = 1e-05
Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Frame = +1
Query: 256 TGKTATFSISILQQID---TSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIG 426
+GKT +F + L + T + A+IL PTRELA Q+ + GD L K G
Sbjct: 109 SGKTLSFGLPTLATLAGGRTEKHKPRAVILTPTRELAMQVADALQPYGDVLGLKMKVVCG 168
Query: 427 GT-MSVKIFANWRLVFMLLWVTPGRVYDLIN 516
GT M +I+A R V +L+ TPGR+ D+IN
Sbjct: 169 GTSMGNQIYALERGVDVLV-ATPGRLRDIIN 198
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 51.6 bits (118), Expect = 1e-05
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
FDD+ LKE LL+ I GFE+PS IQ +I ++G D+I QAQ+
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQT 50
Score = 50.8 bits (116), Expect = 2e-05
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECX--ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 429
TGKTA F +I+ D S ++ ALILAPTRELA Q+ + ++ LG H GG
Sbjct: 52 TGKTAAFGCAIINNADFSGKKKSPKALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGG 111
Query: 430 TMSVKIFANWRLVFMLLWVTPGRVYDLI 513
+ + ++ TPGRV DLI
Sbjct: 112 QPIDRQIRALKNGVDIVVGTPGRVLDLI 139
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 51.6 bits (118), Expect = 1e-05
Identities = 32/94 (34%), Positives = 49/94 (52%)
Frame = +1
Query: 235 YRSSPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCH 414
+ S TGKTA+F + IL++I+ + R A+I+APTRELA QI + G +
Sbjct: 42 FGKSSTGTGKTASFVLPILEKIEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRIENLVI 101
Query: 415 ACIGGTMSVKIFANWRLVFMLLWVTPGRVYDLIN 516
A + G ++ ++ TPGRV D +N
Sbjct: 102 APLIGGADMRDQIKRLKDSQIVVGTPGRVNDHLN 135
>UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1;
Aquifex aeolicus|Rep: ATP-dependent RNA helicase DeaD -
Aquifex aeolicus
Length = 293
Score = 51.6 bits (118), Expect = 1e-05
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Frame = +1
Query: 232 CYRSSPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKC 411
C + TGKTA F + IL + + ALILAPTRELA QI+ +LN +
Sbjct: 12 CLIQAKTGTGKTAAFGLPILNSLKEGEK---ALILAPTRELALQIRDNFRDFARYLNVRT 68
Query: 412 HACIGGTMSVKIFANWRLV----FMLLWVTPGRVYDLI 513
A GGT K+F + +++ ++ TPGR+ DLI
Sbjct: 69 FAFYGGT---KVFGDLKVLRGGKVDVVIGTPGRIKDLI 103
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 51.6 bits (118), Expect = 1e-05
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Frame = +1
Query: 256 TGKTATFSISILQQIDT-----SIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHAC 420
TGKTA F+I +LQ ++ R+ +LI+ PTRELA QI + A G H
Sbjct: 130 TGKTAAFAIPVLQLLNAVKTNEKKRKIRSLIITPTRELAIQIGESFKAYGRHTGLTSTVI 189
Query: 421 IGGTMSVKIFANWRLVFMLLWVTPGRVYDLIN 516
GG A+ + +L TPGR+ DL+N
Sbjct: 190 FGGVNQNPQTASLQKGIDILIATPGRLLDLMN 221
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 51.6 bits (118), Expect = 1e-05
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDH-LNAKCHACIGGT 432
TGKTA F ++Q+ID + R ALIL+PTREL QI + + A GG
Sbjct: 51 TGKTAAFGFPVIQKIDANNRNTQALILSPTRELCLQITNELKNYSKYEKGINVVAVYGGA 110
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLIN 516
+ + + ++ TPGR+ D+IN
Sbjct: 111 SITEQARDIKRGAQIIVATPGRMQDMIN 138
Score = 36.7 bits (81), Expect = 0.41
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI-MPCIQGRDVIAQAQS 253
F+ + L E LLR I GFE P+ +Q++AI M + D++A AQ+
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLLEKDIDLVALAQT 49
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 51.6 bits (118), Expect = 1e-05
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIR-ECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 432
TGKTA F + ILQ++ R A+I+ PTRELA+QIQ V+ ALG + + GG
Sbjct: 49 TGKTAAFVLPILQRLMRGPRGRVRAMIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGGV 108
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYD 507
R + V PGR+ D
Sbjct: 109 GYQGQIQRLRRGVEIAVVCPGRLLD 133
Score = 35.9 bits (79), Expect = 0.72
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+FD ++ GI G+ P+ IQ++ I + GRDVI AQ+
Sbjct: 2 SFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQT 47
>UniRef50_Q58HG3 Cluster: DEAD-box RNA helicase; n=4; Eukaryota|Rep:
DEAD-box RNA helicase - Athelges takanoshimensis
Length = 124
Score = 51.6 bits (118), Expect = 1e-05
Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTS----IRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
TGKTA F++ +LQ + + R AL+L P+RELA QI + V HL+ K
Sbjct: 8 TGKTAGFTLPVLQYLSETKHPKYRPVRALVLTPSRELAAQILENVKEYSTHLDIKSTVVF 67
Query: 424 GGTMSVKIFANWRLVFMLLWVTPGRVYDL 510
GG + R +L TPGR+ DL
Sbjct: 68 GGVKASGQIKTLRQGVDILVATPGRLLDL 96
>UniRef50_Q4P1Z0 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1220
Score = 51.6 bits (118), Expect = 1e-05
Identities = 28/80 (35%), Positives = 43/80 (53%)
Frame = +2
Query: 29 GPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 208
GP+ D+ + GT + VV ++ +NL +LLR I YG P+ IQQRA+
Sbjct: 618 GPNLDEAAPGTTNAAQAGTGMIQPNAVVSKWEHLNLHPDLLRSILKYGLGPPNKIQQRAL 677
Query: 209 MPCIQGRDVIAQAQSELEKL 268
++G D+IAQA E++
Sbjct: 678 PFLLRGSDIIAQAPPTQERI 697
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 51.6 bits (118), Expect = 1e-05
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGT 432
+GKTA F + +LQQID S+ + AL+L PTRELA Q+ + L L N K GG
Sbjct: 51 SGKTAAFGLGLLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQ 110
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYD 507
+ + ++ TPGR+ D
Sbjct: 111 PFGMQRDSLQHAPHIIVATPGRLLD 135
>UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH box
family protein; n=16; Staphylococcus|Rep: ATP-dependent
RNA helicase DEAD/DEAH box family protein -
Staphylococcus aureus (strain Newman)
Length = 448
Score = 51.2 bits (117), Expect = 2e-05
Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = +1
Query: 223 RTRCYRSSPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGD-HL 399
RT S TGK+ F + ++Q ID+ I+E A+++APTRELAQQ+ L
Sbjct: 41 RTNLIGQSQTGTGKSHAFLLPLMQLIDSEIKEPQAIVVAPTRELAQQLYDAANHLSQFKA 100
Query: 400 NAKCHACIGGTMSVKIFANWRLVFMLLWVTPGRVYDL 510
IGGT K L+ TP R+ DL
Sbjct: 101 GVSVKVFIGGTDIEKDRQRCNAQPQLIIGTPTRINDL 137
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 51.2 bits (117), Expect = 2e-05
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG-T 432
TGKTA F I +++++D + AL+L PTRELA Q+ + +L + GG +
Sbjct: 51 TGKTAAFGIPLIERLDEKANDVQALVLTPTRELALQVCNEIDSLKGNKRLNLLPVYGGVS 110
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLIN 516
+ +I A R V +++ TPGR+ D +N
Sbjct: 111 IGNQIRALKRRVDLVVG-TPGRIIDHLN 137
>UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box
family protein; n=1; Pseudoalteromonas tunicata D2|Rep:
ATP-dependent RNA helicase, DEAD box family protein -
Pseudoalteromonas tunicata D2
Length = 416
Score = 51.2 bits (117), Expect = 2e-05
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Frame = +1
Query: 226 TRCYRSSPVRTGKTATFSISILQQ---IDTS---IRECXALILAPTRELAQQIQKVVIAL 387
T Y +P TGKTA + + LQ+ +D S +R AL L PTRELA Q+++ +
Sbjct: 40 TDTYAIAPTGTGKTAAYLLPTLQELSRVDNSAEQVRPVRALFLVPTRELAVQVEESIAKY 99
Query: 388 GDHLNAKCHACIGGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
G LN + + GG ++ ++ TP R+ DL+
Sbjct: 100 GKGLNLRTISVFGGVRIPSQVNRFKRGADIVVATPRRLVDLL 141
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 51.2 bits (117), Expect = 2e-05
Identities = 30/84 (35%), Positives = 47/84 (55%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
+GKTA F+I ILQ++ + +LILAPTREL+ QI++ +I+LG + +GG
Sbjct: 89 SGKTAAFTIPILQKLLEKPQRLFSLILAPTRELSLQIKEQLISLGSEIGLDVCLILGGLD 148
Query: 436 SVKIFANWRLVFMLLWVTPGRVYD 507
V ++ +PGR+ D
Sbjct: 149 MVSQALQLSKKPHIIVGSPGRIAD 172
Score = 39.9 bits (89), Expect = 0.044
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +2
Query: 89 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
D D D TF+D+ + EL R G+++P+ IQ AI + G+D+I A++
Sbjct: 33 DDDKDDDTPTFEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDIIGLAET 87
>UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 440
Score = 51.2 bits (117), Expect = 2e-05
Identities = 29/87 (33%), Positives = 43/87 (49%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
+GKTATF+ ILQ + A++L RELA QI + G LN + +GG
Sbjct: 50 SGKTATFAFPILQDLAKDPFGVFAIVLTANRELAMQISEQFTIFGSSLNLRVSTLVGGVD 109
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLIN 516
K + + ++ TPGR D+I+
Sbjct: 110 FNKQLSELERIPHIVVGTPGRTLDMID 136
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 51.2 bits (117), Expect = 2e-05
Identities = 30/84 (35%), Positives = 45/84 (53%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
+GKTA F+I IL ++ A ILAPTRELAQQI++ +LG + + +GG
Sbjct: 129 SGKTAAFAIPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMN 188
Query: 436 SVKIFANWRLVFMLLWVTPGRVYD 507
+ + ++ TPGR+ D
Sbjct: 189 MMDQARDLMRKPHIIIATPGRLMD 212
Score = 47.6 bits (108), Expect = 2e-04
Identities = 20/55 (36%), Positives = 35/55 (63%)
Frame = +2
Query: 89 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+T+ D+ E+F ++NL EL++ + KP+ IQ +AI P ++G D+I AQ+
Sbjct: 73 NTNEDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQT 127
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 50.8 bits (116), Expect = 2e-05
Identities = 30/84 (35%), Positives = 42/84 (50%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKTA F I +++++ T R ALIL PTRELA Q+ + L H + GG
Sbjct: 54 TGKTAAFGIPVVEKVSTG-RHVQALILTPTRELAIQVSGEIQKLSKHKKIRTLPIYGGQS 112
Query: 436 SVKIFANWRLVFMLLWVTPGRVYD 507
V + ++ TPGR+ D
Sbjct: 113 IVHQIKALKQGVQVVIGTPGRIID 136
Score = 44.4 bits (100), Expect = 0.002
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
F+++ + EE+ + I GFE+PS IQ +AI + G DVI QAQ+
Sbjct: 8 FNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQT 52
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 50.8 bits (116), Expect = 2e-05
Identities = 41/108 (37%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSI-----RECXALILAPTRELAQQIQKVVIALGDHLNAKCHAC 420
TGKTA F++ + + T+ R C LIL+PTRELA QI + HL +A
Sbjct: 54 TGKTAAFALPSIHYLATNPQARPQRGCRMLILSPTRELASQIARACNDYTRHLRMSVNAV 113
Query: 421 IGGTMSVKIFANWRLVFM---LLWVTPGRVYDLINFVRALHAKHHQTF 555
GG V I R++ +L TPGR+ DLI+ RAL K + F
Sbjct: 114 FGG---VPIGRQMRMLDRGTDILVATPGRLLDLID-QRALVLKDVEVF 157
Score = 33.1 bits (72), Expect = 5.0
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+F + L L++ + G+ KP+ IQ +AI ++G+D+ AQ+
Sbjct: 7 SFKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDLCGIAQT 52
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 50.8 bits (116), Expect = 2e-05
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Frame = +1
Query: 256 TGKTATFSISILQQI-----DTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHAC 420
TGKTA F++ +LQ++ S L+L PTRELA+Q+ + IA G L+ + A
Sbjct: 49 TGKTAGFALPLLQRLVQHGPAVSSNRARVLVLVPTRELAEQVLQSFIAYGKGLDLRFLAA 108
Query: 421 IGGTMSVKIFANWRLVFMLLWVTPGRVYDL 510
GG R +L TPGR+ DL
Sbjct: 109 YGGVSINPQMMKLRKGVDVLVATPGRLLDL 138
Score = 34.3 bits (75), Expect = 2.2
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+F + L + LLR + ++ P+ +Q +AI + G+DV+A AQ+
Sbjct: 2 SFASLGLIDPLLRNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQT 47
>UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 387
Score = 50.8 bits (116), Expect = 2e-05
Identities = 30/90 (33%), Positives = 44/90 (48%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
SP TGKT + I IL +ID + A+ILAP+ ELA QI + + N I
Sbjct: 54 SPTGTGKTLAYLIPILHRIDPESKAVQAVILAPSHELAMQIHQTIEKWTKDNNISSEPLI 113
Query: 424 GGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
GG + N + ++ T GR+ ++I
Sbjct: 114 GGANIKRQIENLKKRPQIIVATTGRLLEVI 143
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 50.8 bits (116), Expect = 2e-05
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
+P TGKT F I +++ ID AL+LAPTRELA QIQ + L + C+
Sbjct: 56 APTGTGKTFAFGIPMVEHIDPESDAVQALVLAPTRELALQIQDELRDLCEFKEGVRSVCL 115
Query: 424 -GGTMSVKIFANWRLVFMLLWVTPGRVYD 507
GG K + ++ TPGR+ D
Sbjct: 116 YGGAPIEKQITTLKKHPQIVVATPGRLMD 144
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 50.8 bits (116), Expect = 2e-05
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECX-----ALILAPTRELAQQIQKVVIALGDHLNAKCHAC 420
TGKTA ++ IL Q+ + R+ AL+LAPTRELA QI A G HL +
Sbjct: 50 TGKTAALALPILNQLGKNSRKSIPHHPLALVLAPTRELAIQIGDSFDAYGRHLKLRSVLI 109
Query: 421 IGGTMSVKIFANWRLVFMLLWVTPGRVYDLIN 516
GG + +L TPGR+ DL+N
Sbjct: 110 YGGVGQGNQVKALKRGAHILVATPGRLLDLMN 141
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 50.8 bits (116), Expect = 2e-05
Identities = 33/90 (36%), Positives = 43/90 (47%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
SP TGKT + I Q+ SI LIL PTREL+ QI+ V L + +C
Sbjct: 54 SPSGTGKTTCYIIGTSNQLCQSINSPQCLILVPTRELSIQIRNVFNVLNIYTKNSITSCH 113
Query: 424 GGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
GG + N + F + TPGRV L+
Sbjct: 114 GGRWLGEDLKNLKKNFHGIVGTPGRVLHLL 143
Score = 37.1 bits (82), Expect = 0.31
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +2
Query: 110 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
V++F D+ LK + +G++ S IQ ++P ++GRD+I Q+ S
Sbjct: 9 VKSFFDLKLKNSIKKGVFINAMYYCSKIQSITLIPLLKGRDIIYQSPS 56
>UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqfR;
n=12; Bacillaceae|Rep: Probable ATP-dependent RNA
helicase yqfR - Bacillus subtilis
Length = 438
Score = 50.8 bits (116), Expect = 2e-05
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIAL-----GDHLNAK 408
S TGKT + + +L +ID + +I APTRELA QI + + + G + +K
Sbjct: 48 SQTGTGKTHAYLLPLLNKIDPAKDVVQVVITAPTRELANQIYQEALKITQGEEGSQIRSK 107
Query: 409 CHACIGGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
C IGGT K ++ L+ TPGR+ DLI
Sbjct: 108 CF--IGGTDKQKSIDKLKIQPHLVVGTPGRIADLI 140
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 50.4 bits (115), Expect = 3e-05
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGT 432
TGKT FS L + LILAPTRE+A QI V+ A+G + +CH IGGT
Sbjct: 111 TGKTCVFSTIALDSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGT 170
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLI 513
+ + + + +PGR+ LI
Sbjct: 171 PLSQDKTRLKKCHIAVG-SPGRIKQLI 196
Score = 37.5 bits (83), Expect = 0.23
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
F+ + L +L G+ A GFE+PS +Q +AI G D+I QA+S
Sbjct: 65 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKS 109
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 50.4 bits (115), Expect = 3e-05
Identities = 30/90 (33%), Positives = 48/90 (53%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
SP TGKT +++ +L++I + A+ILAP+REL QI +V+ + + I
Sbjct: 48 SPTGTGKTLAYALPVLERIKPEQKHPQAVILAPSRELVMQIFQVIQDWKAGSELRAASLI 107
Query: 424 GGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
GG K + ++ TPGRV++LI
Sbjct: 108 GGANVKKQVEKLKKHPHIIVGTPGRVFELI 137
Score = 32.7 bits (71), Expect = 6.7
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +2
Query: 164 AYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEKLL 271
A GF+KP+ +Q++A + G+DVIA++ + K L
Sbjct: 21 ASGFQKPTPVQEQAAQLIMDGKDVIAESPTGTGKTL 56
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 50.4 bits (115), Expect = 3e-05
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGT 432
TGKTA F I ++ +D SI + +LIL PTRELA Q+ + L + A GG
Sbjct: 49 TGKTAAFGIPAIEHVDISINQTQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGE 108
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLINFVRALHAKH 543
+ + + ++ TPGR+ D ++ R L+A H
Sbjct: 109 SIERQIRDLKAGAHIVVGTPGRIIDHLD-RRTLNASH 144
Score = 33.9 bits (74), Expect = 2.9
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
F D+ L E++ I + G+ + + IQ++ I + G+D+ QAQ+
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQT 47
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 50.4 bits (115), Expect = 3e-05
Identities = 36/92 (39%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Frame = +1
Query: 256 TGKTATF---SISILQQIDTSI--RECXALILAPTRELAQQIQKVVIALGDHLNAKCHAC 420
TGKTA F SI L++ D I + C L+LAPTREL QI G K +
Sbjct: 50 TGKTAAFMLPSIDRLREADNRIPFKSCRMLVLAPTRELVSQIAASAKDYGALAGLKVQSI 109
Query: 421 IGGTMSVKIFANWRLVFMLLWVTPGRVYDLIN 516
+GGT K +L TPGR+ DLI+
Sbjct: 110 VGGTSVNKDRNKLHRGTDILIATPGRLLDLID 141
Score = 40.7 bits (91), Expect = 0.025
Identities = 16/45 (35%), Positives = 30/45 (66%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
F D+ L + +L+ + G+ P+ IQ++AI P ++GRD++ AQ+
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQT 48
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 50.4 bits (115), Expect = 3e-05
Identities = 38/90 (42%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Frame = +1
Query: 256 TGKTATFSISILQQ--IDTSIRECX---ALILAPTRELAQQIQKVVIALGDHLNA-KCHA 417
+GKTA F+I +LQ + IR AL+LAPTRELAQQI+K V A L + K
Sbjct: 166 SGKTAAFTIPMLQHCLVQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFSRSLESLKNCI 225
Query: 418 CIGGTMSVKIFANWRLVFMLLWVTPGRVYD 507
+GGT K + R + TPGR D
Sbjct: 226 VVGGTNIEKQRSELRAGVEIAVATPGRFID 255
Score = 37.1 bits (82), Expect = 0.31
Identities = 15/48 (31%), Positives = 32/48 (66%)
Frame = +2
Query: 110 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+E+F+DM L +++ I + + +PS+IQ +A+ + GRD++ A++
Sbjct: 117 IESFNDMCLHPSIMKDIAYHEYTRPSSIQAQAMPIALSGRDLLGCAET 164
>UniRef50_Q7Q0A7 Cluster: ENSANGP00000011621; n=5;
Endopterygota|Rep: ENSANGP00000011621 - Anopheles
gambiae str. PEST
Length = 523
Score = 50.4 bits (115), Expect = 3e-05
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSIRECX--ALILAPTRELAQQIQKVVIALGDHLNAKCH 414
+P +GKTA F I IL + ++ C ALI+ PTRELA+Q Q+ + LGD +N + H
Sbjct: 186 APTGSGKTAAFLIPILHHLKKPMK-CGFRALIICPTRELAKQTQREALRLGDEMNLRTH 243
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 50.4 bits (115), Expect = 3e-05
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG-T 432
+GKTA F + ILQ++ + ALILAPTREL QI + ++A+G L +GG
Sbjct: 99 SGKTAAFGLPILQRLLQRTQRFYALILAPTRELCLQISQQILAMGGTLGVTVVTLVGGLD 158
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLINFVRALHAK 540
+ + A + +++ +PGRV D + + K
Sbjct: 159 HNTQAIALAKKPHVVVG-SPGRVVDHLQQTKGFSLK 193
Score = 38.7 bits (86), Expect = 0.10
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +2
Query: 107 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
V TF + L EL + G++ P+AIQ + +QGRD+IA A++
Sbjct: 49 VSPTFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAET 97
>UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6
protein - Homo sapiens (Human)
Length = 187
Score = 50.4 bits (115), Expect = 3e-05
Identities = 22/45 (48%), Positives = 33/45 (73%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
F+D LK ELL GI+ G+EKPS IQ+ +I + GRD++A+A++
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKN 142
Score = 36.7 bits (81), Expect = 0.41
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKV 375
TGK+ + I +L+++D A+++ PTRELA Q+ ++
Sbjct: 144 TGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQI 183
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 50.4 bits (115), Expect = 3e-05
Identities = 29/87 (33%), Positives = 46/87 (52%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKTA F I ++++I+ A+++APTRELA Q+ + + +G AK GG
Sbjct: 51 TGKTAAFGIPLVEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQD 110
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLIN 516
+ + ++ TPGR+ D IN
Sbjct: 111 IGRQIRALKKNPNIIVGTPGRLLDHIN 137
Score = 41.1 bits (92), Expect = 0.019
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
TF D NL +L++ I GFE+ + IQ + I + +DVI QAQ+
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQT 49
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 50.4 bits (115), Expect = 3e-05
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGT 432
TGKT FS L + LILAPTRE+A QI V+ A+G + +CH IGGT
Sbjct: 110 TGKTCVFSTIALDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGT 169
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLI 513
+ + + + +PGR+ LI
Sbjct: 170 PLSQDKTRLKKCHIAVG-SPGRIKQLI 195
Score = 37.5 bits (83), Expect = 0.23
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
F+ + L +L G+ A GFE+PS +Q +AI G D+I QA+S
Sbjct: 64 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKS 108
>UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 473
Score = 50.0 bits (114), Expect = 4e-05
Identities = 31/84 (36%), Positives = 43/84 (51%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
+GKT F++S+L + E LIL P+RE+AQQI KV + L + IGGT
Sbjct: 81 SGKTLAFALSLLTTLQKK-PEARGLILVPSREMAQQIYKVFLELCAEMPVSVCLAIGGTT 139
Query: 436 SVKIFANWRLVFMLLWVTPGRVYD 507
K + L+ TPGR+ D
Sbjct: 140 GSKQANQLKKNPRLIIATPGRMND 163
Score = 37.9 bits (84), Expect = 0.18
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEKLL 271
TF +MNL LL + KP+ +Q +AI + G D+IA AQ+ K L
Sbjct: 34 TFQEMNLAPVLLPALTKMKISKPTPVQSQAIPASLDGSDIIAIAQTGSGKTL 85
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 50.0 bits (114), Expect = 4e-05
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDH-LNAKCHACIGGT 432
TGKTA F++ ILQ + I ALILAPTRELA Q+ + L + N GG
Sbjct: 54 TGKTAAFALPILQNLSPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQ 113
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLIN 516
+ R ++ TPGR+ D I+
Sbjct: 114 EYGRQLKQLRSGAQVVVGTPGRILDHID 141
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 50.0 bits (114), Expect = 4e-05
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIA-LGDHLNAKCHACIGGT 432
TGKTA F++ +L+++++ + L+LAPTRELA Q+ A H + K A GGT
Sbjct: 119 TGKTAAFALPLLERLESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHPHLKVLAVYGGT 178
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYD 507
+ R ++ TPGRV D
Sbjct: 179 DFRSQISTLRRGVDVVVGTPGRVMD 203
Score = 36.7 bits (81), Expect = 0.41
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
FD E LL+ + G+ PS IQ+ A + GRD++ QAQ+
Sbjct: 73 FDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQT 117
>UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein;
n=37; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 427
Score = 50.0 bits (114), Expect = 4e-05
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Frame = +1
Query: 256 TGKTATFSISILQQI------DTSIRECXALILAPTRELAQQIQKVVIALGDHLNA--KC 411
+GKTA F++ +LQ++ + S + L+L PTRELAQQ+ ++ H N K
Sbjct: 57 SGKTAAFAVPLLQRLFEAKTAEKSAGQVRCLVLVPTRELAQQVADSFLSYASHFNGQLKI 116
Query: 412 HACIGGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
A GG + R +L TPGR+ DL+
Sbjct: 117 VAAFGGVSVNLQMQSLRAGADVLVATPGRLLDLL 150
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 50.0 bits (114), Expect = 4e-05
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRE-CXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 432
TGKTA F I +L++ID + A+I+ PTRELA QI + + +L K GG
Sbjct: 67 TGKTAAFGIPLLERIDFKANKFVKAIIVTPTRELALQIFEELKSLKGTKRVKITTLYGGQ 126
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLIN 516
K F + ++ TPGR+ D +N
Sbjct: 127 SLEKQFKDLEKGVDIVVGTPGRIIDHLN 154
Score = 39.5 bits (88), Expect = 0.058
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +2
Query: 113 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQS 253
E F+D L EE+L I G+EKP+ IQ+ + + +D+IAQAQ+
Sbjct: 18 ERFEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQT 65
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 50.0 bits (114), Expect = 4e-05
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDT-SIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 432
+GKTA F I +LQ++ AL+++PTRELA Q KVV LG +C +GG
Sbjct: 72 SGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGD 131
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLI 513
+ F+ +L TPGR+ +I
Sbjct: 132 QIEEQFSTIHENPDILLATPGRLLHVI 158
>UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform a
variant; n=3; Tetrapoda|Rep: ATP-dependent RNA helicase
ROK1 isoform a variant - Homo sapiens (Human)
Length = 512
Score = 50.0 bits (114), Expect = 4e-05
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Frame = +1
Query: 214 LHPRTRCYRSSPVRTGKTATFSISILQQIDTSIRE-CXALILAPTRELAQQIQKVVIALG 390
LH R S+P +GKT FSI IL Q+ + ALI++PTRELA QI + +I +
Sbjct: 199 LHGR-ELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKIS 257
Query: 391 DHLNAKCHACIGGTMSVKIFA-NWRLVFMLLWVTPGRVYDLI 513
+ + H ++ K F F +L TP R+ L+
Sbjct: 258 EGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLL 299
Score = 34.7 bits (76), Expect = 1.7
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = +2
Query: 92 TDWDQVVETFDDMN----LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSEL 259
TD + TF ++ + LL+ I GF+ P+ IQ +AI + GR+++A A +
Sbjct: 153 TDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGS 212
Query: 260 EKLL 271
K L
Sbjct: 213 GKTL 216
>UniRef50_A7ETZ1 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 670
Score = 50.0 bits (114), Expect = 4e-05
Identities = 39/109 (35%), Positives = 48/109 (44%), Gaps = 5/109 (4%)
Frame = +1
Query: 196 ATRNNALHPRTRCYRSSPVRTGKTATFSISILQQIDTSIRE----CXALILAPTRELAQQ 363
AT L R C + TGKT F I +Q + R L++ PTRELAQQ
Sbjct: 107 ATLRPLLSERVDCLAQAKTGTGKTIAFLIPAIQTLINKQRRPQDGISLLVMTPTRELAQQ 166
Query: 364 IQKVVIALGDHL-NAKCHACIGGTMSVKIFANWRLVFMLLWVTPGRVYD 507
I K L +L N K IGGT N +L TPGR++D
Sbjct: 167 IAKEASQLLKNLPNYKVGFAIGGTNKTTEEKNILNGCNILIATPGRLFD 215
>UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX52;
n=37; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX52 - Homo sapiens (Human)
Length = 599
Score = 50.0 bits (114), Expect = 4e-05
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Frame = +1
Query: 214 LHPRTRCYRSSPVRTGKTATFSISILQQIDTSIRE-CXALILAPTRELAQQIQKVVIALG 390
LH R S+P +GKT FSI IL Q+ + ALI++PTRELA QI + +I +
Sbjct: 200 LHGR-ELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKIS 258
Query: 391 DHLNAKCHACIGGTMSVKIFA-NWRLVFMLLWVTPGRVYDLI 513
+ + H ++ K F F +L TP R+ L+
Sbjct: 259 EGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLL 300
Score = 34.7 bits (76), Expect = 1.7
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = +2
Query: 92 TDWDQVVETFDDMN----LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSEL 259
TD + TF ++ + LL+ I GF+ P+ IQ +AI + GR+++A A +
Sbjct: 154 TDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGS 213
Query: 260 EKLL 271
K L
Sbjct: 214 GKTL 217
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 50.0 bits (114), Expect = 4e-05
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Frame = +1
Query: 256 TGKTATFSISIL---------QQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAK 408
+GKTA F I +L +I+ S + A+ILAPTRELAQQI++ I G L +
Sbjct: 439 SGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIR 498
Query: 409 CHACIGGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
A IGG R+ ++ TPGR+ D++
Sbjct: 499 TVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVL 533
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 49.6 bits (113), Expect = 5e-05
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKTA F+I IL ++ + ++ ALI+ PTRELA QI + ++ LG K C+ G
Sbjct: 93 TGKTAAFAIPILNTLNRN-KDIEALIITPTRELAMQISEEILKLGRFGRIKT-ICMYGGQ 150
Query: 436 SVKIFAN-WRLVFMLLWVTPGRVYDLINFVRALH 534
S+K + + TPGR+ D + R H
Sbjct: 151 SIKRQCDLLEKKPKAMIATPGRLLDHLQNGRIAH 184
Score = 46.8 bits (106), Expect = 4e-04
Identities = 26/70 (37%), Positives = 39/70 (55%)
Frame = +2
Query: 44 QGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ 223
Q S + P L + Q + FD LK+ +L+GI GF PS +Q ++I +Q
Sbjct: 22 QQSEESPSVTIKQGLKSKHKQDTQGFDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQ 81
Query: 224 GRDVIAQAQS 253
G+D+IAQAQ+
Sbjct: 82 GKDLIAQAQT 91
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 49.6 bits (113), Expect = 5e-05
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 TGKTATFSISILQQIDT--SIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 429
TGKTA FSI IL+Q+D+ R+ A+++ PTRELA Q+ L + + GG
Sbjct: 92 TGKTAAFSIPILEQLDSLEDCRDPQAIVIVPTRELADQVAAEAERLARGVPTEIAVLSGG 151
Query: 430 TMSVKIFANWRLVFMLLWVTPGRVYD 507
+ L+ TPGRV+D
Sbjct: 152 KNMNRQLRQLENGTQLVVGTPGRVHD 177
Score = 37.9 bits (84), Expect = 0.18
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +2
Query: 110 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+++FD+++L + R + GF PS IQ I + G+DVI QA++
Sbjct: 43 MDSFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQART 90
>UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=1; Exiguobacterium sibiricum
255-15|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Exiguobacterium sibiricum 255-15
Length = 391
Score = 49.6 bits (113), Expect = 5e-05
Identities = 30/91 (32%), Positives = 44/91 (48%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
+P TGKT + I L+ ID + +I APTREL QI +V+ K A I
Sbjct: 41 APTGTGKTLAYVIPALELIDENEPHIQVVITAPTRELVMQIHQVIQLFSQGSGIKSGAFI 100
Query: 424 GGTMSVKIFANWRLVFMLLWVTPGRVYDLIN 516
GG + + ++ TPGR+ +LI+
Sbjct: 101 GGVELKRQHERLKKKPQIIVGTPGRLVELID 131
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 49.6 bits (113), Expect = 5e-05
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRE--CXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 429
TGKT F + +Q + T R+ ALIL PTRELA QI + ++ + + +GG
Sbjct: 50 TGKTLAFLLPTIQLLSTEPRQPGVRALILTPTRELALQINEALLQIARGTGIRAAVAVGG 109
Query: 430 TMSVKIFANWRLVFMLLWVTPGRVYDLIN 516
+ R ++ TPGR+YD ++
Sbjct: 110 LNERSQLRDIRGGANIVVATPGRLYDFMS 138
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 49.6 bits (113), Expect = 5e-05
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGT 432
TGKTA F +LQ ID S + LI+APTREL QI + H+ + A GG+
Sbjct: 50 TGKTAAFGFPLLQNIDASSKTTQGLIIAPTRELCLQITNEMKLYAKHIKGVRVVAVYGGS 109
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLI 513
+ ++ TPGR+ D++
Sbjct: 110 NIQEQAREISRGAQIVVATPGRMQDMM 136
Score = 39.9 bits (89), Expect = 0.044
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQS 253
TFD + L LL+ I GFE PS IQ+ AI + + RD++A AQ+
Sbjct: 2 TFDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQT 48
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 49.6 bits (113), Expect = 5e-05
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNA---KCHACIG 426
TGKTA F +++L I+T + L++ TRELAQQ + + LG + + +C G
Sbjct: 121 TGKTAVFVLTVLNTINTESNKVECLVITHTRELAQQARDEFLRLGKFMKSVKVECFYGGG 180
Query: 427 GTMSVKIFANWRLVFMLLWVTPGRVYDLINFVRAL 531
+SV I + ++ TPGR+ DLI +AL
Sbjct: 181 EPVSVNIQTIETVKPQIVVGTPGRLKDLICERKAL 215
Score = 40.7 bits (91), Expect = 0.025
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +2
Query: 110 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
V F + LKEELLR + GFE P+ +Q ++ + G +I QA++
Sbjct: 72 VSQFKNFGLKEELLRAVKEAGFEHPTRVQAESLTNALLGEQLICQAKA 119
>UniRef50_Q5KLJ5 Cluster: Translation initiation factor, putative;
n=2; Filobasidiella neoformans|Rep: Translation
initiation factor, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 932
Score = 49.6 bits (113), Expect = 5e-05
Identities = 35/92 (38%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Frame = +2
Query: 5 DWPEDSKNGPSKDQ-GSYDG--PPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGF 175
DWP S G + Q G DG PG G VV ++ +NLK +LLR I YG
Sbjct: 310 DWP--SPGGQQQVQSGQKDGLTTPG---GAAVPGGGIVVSKWEHLNLKVDLLRSISKYGI 364
Query: 176 EKPSAIQQRAIMPCIQGRDVIAQAQSELEKLL 271
P+ IQ R + I+G D+IAQA E+++
Sbjct: 365 GPPNKIQTRVLPFMIKGSDIIAQAPPTTERII 396
>UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG425
homolog; n=4; Mycoplasma|Rep: Probable ATP-dependent RNA
helicase MG425 homolog - Mycoplasma pneumoniae
Length = 450
Score = 49.6 bits (113), Expect = 5e-05
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQI--DTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHA 417
SP TGKTA F I +++ + S L++APTRELA+QI+ I H + K +
Sbjct: 47 SPTGTGKTAVFGIPVIETLLKKPSKGTTQTLVVAPTRELAEQIKTTFINFAKHTHLKVVS 106
Query: 418 CIGGTMSVKIFANWRLVFMLLWVTPGRVYDLI--NFVRALHAKH 543
IGG + ++ T GRV DL+ ++ H +H
Sbjct: 107 LIGGIPIWQQLKQLENQPEIVVGTMGRVMDLLERGVIKFEHLEH 150
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 49.2 bits (112), Expect = 7e-05
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGG 429
TGKT FS L+ ++T+ LIL PTRE+A QI+ V+ ++G H+N K + IGG
Sbjct: 72 TGKTLVFSTIALETVNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVNGLKIESFIGG 130
Score = 33.1 bits (72), Expect = 5.0
Identities = 21/64 (32%), Positives = 37/64 (57%)
Frame = +2
Query: 83 TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELE 262
T D D+ + +F + L +++ +G+ GF+KPS IQ +AI G D+I +++S
Sbjct: 15 TKDVILDENI-SFASLLLPDDIKQGLSVSGFKKPSPIQFKAIPLGRCGFDLIVKSKSGTG 73
Query: 263 KLLL 274
K L+
Sbjct: 74 KTLV 77
>UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 598
Score = 49.2 bits (112), Expect = 7e-05
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 9/96 (9%)
Frame = +1
Query: 256 TGKTATFSISI----LQQIDTSIRECX-ALILAPTRELAQQIQKVVIALGDHL---NAKC 411
+GKT F + I ++Q+ T+ + C AL++APTRELA+QI ++ + L HL
Sbjct: 57 SGKTLAFLLPIFNVLIKQVKTANKNCVYALVIAPTRELAKQIHEIAVQLASHLENNQFSI 116
Query: 412 HACIGGTMSVKIFANWRLV-FMLLWVTPGRVYDLIN 516
CIGG + +N + +L TPG++ +L++
Sbjct: 117 QLCIGGVSTKIDVSNIQSQGANILIATPGKLKELMD 152
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 49.2 bits (112), Expect = 7e-05
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRE-CXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 432
+GKTA + + I+ +++T E +LI+ PTRELA Q KV LG N K IGG+
Sbjct: 61 SGKTAAYLVPIINRLETHSTEGVRSLIICPTRELALQTIKVFNELGKLTNLKASLIIGGS 120
Query: 433 MSVKIFANWRLVFMLLWVTPGRV 501
F N ++ TPGR+
Sbjct: 121 KLSDQFDNLSSGPDIIVATPGRL 143
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 49.2 bits (112), Expect = 7e-05
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Frame = +1
Query: 241 SSPVRTGKTATFSISILQQI----DTSIRECX----ALILAPTRELAQQIQKVVIALGDH 396
S+ TGKTA F++ +L ++ +TS+ ALI+APTRELA QI + V G +
Sbjct: 48 SAQTGTGKTAGFTLPLLYRLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKY 107
Query: 397 LNAKCHACIGGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
L + GG A + +L TPGR+ DL+
Sbjct: 108 LALRTAVVFGGINIEPQIAALQAGVEILVATPGRLLDLV 146
>UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase
DbpA; n=1; Candidatus Kuenenia stuttgartiensis|Rep:
Similar to ATP-independent RNA helicase DbpA -
Candidatus Kuenenia stuttgartiensis
Length = 407
Score = 49.2 bits (112), Expect = 7e-05
Identities = 26/86 (30%), Positives = 44/86 (51%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
+GKTA +I ++Q++D S+ L++ PTREL Q + + + + +A GG
Sbjct: 49 SGKTAACAIPLIQKVDPSLDAIQGLVIVPTRELCMQYVEEIRKIAAKTDVIPYAVYGGFD 108
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLI 513
A + +L TPGR+ DL+
Sbjct: 109 RAAQIARVKQTVHILVATPGRLIDLL 134
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 49.2 bits (112), Expect = 7e-05
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNA--KCHACIGG 429
TGKT F + ILQ ++T +++ A+IL PT ELA QI + V +L C G
Sbjct: 49 TGKTVAFIVPILQNLNTHLKQPQAIILCPTHELASQIIEQVRKFATYLEGVNATLICGGS 108
Query: 430 TMSVKIFANWRLVFMLLWVTPGRVYDLIN 516
+ +I+A + ++ TPGR+ D IN
Sbjct: 109 HIQRQIYALRK--SNIIVGTPGRIADHIN 135
>UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Rep:
SF2-family helicase - Plasmodium falciparum
Length = 490
Score = 49.2 bits (112), Expect = 7e-05
Identities = 29/91 (31%), Positives = 48/91 (52%)
Frame = +1
Query: 241 SSPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHAC 420
SS +GKT + SILQ+++ ++ +LIL PTREL QI + G + +C
Sbjct: 113 SSETGSGKTICYCWSILQELNKNVYGIFSLILLPTRELVFQIIEQFHLYGSKIGVMILSC 172
Query: 421 IGGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
IGG ++ + ++ TPGR+ D++
Sbjct: 173 IGGFSLIEQRKSVMTKPHIIVGTPGRISDIL 203
>UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp-8 -
Neurospora crassa
Length = 626
Score = 49.2 bits (112), Expect = 7e-05
Identities = 35/94 (37%), Positives = 44/94 (46%)
Frame = +1
Query: 232 CYRSSPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKC 411
C S +GKT F++ ILQQ + +IL PTRELA QI + VIAL K
Sbjct: 235 CIGGSRTGSGKTVAFAVPILQQWAANPSAIFGVILTPTRELALQIMEQVIALSQPHVLKA 294
Query: 412 HACIGGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
GG K + L+ TPGR+ D I
Sbjct: 295 VLITGGADMRKQAIDLAKRPHLVIATPGRLADHI 328
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 48.8 bits (111), Expect = 9e-05
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGT 432
TGKTA F + +LQQID R +LIL PTREL QI + +++ K GG+
Sbjct: 51 TGKTAAFGLPLLQQIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYIDGLKVLPVYGGS 110
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLI 513
+ + ++ TPGR+ DL+
Sbjct: 111 SIDSQIRSLKRGVHIIVATPGRLLDLM 137
Score = 32.7 bits (71), Expect = 6.7
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +2
Query: 110 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQS 253
++TF+++ + E+ + I G+E P +Q+ I + + DV+A AQ+
Sbjct: 1 MKTFEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGENNDVVALAQT 49
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 48.8 bits (111), Expect = 9e-05
Identities = 28/86 (32%), Positives = 42/86 (48%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKTA F + ++Q++ + AL+L PTRELA Q+ + +L + H GG
Sbjct: 95 TGKTAAFGLPLIQELGSPCEHPGALVLVPTRELAAQVASELSSLRIQKIPRIHTVYGGVS 154
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLI 513
+ N ++ T GRV D I
Sbjct: 155 IAEQLRNLEQGGEIIVGTTGRVIDHI 180
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 48.8 bits (111), Expect = 9e-05
Identities = 33/85 (38%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGT 432
TGKTA F++ +L +ID + RE LILAPTRELA Q+ L A GG
Sbjct: 71 TGKTAAFALPMLSRIDPARREPQLLILAPTRELALQVATAFETYASQLPGVGVVAVYGGA 130
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYD 507
R +L TPGR+ D
Sbjct: 131 PMGPQLKALRQGAQILVATPGRLCD 155
Score = 37.1 bits (82), Expect = 0.31
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
F + + +L I A G+E+PS IQ +AI + G D+I QAQ+
Sbjct: 25 FAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQT 69
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 48.8 bits (111), Expect = 9e-05
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQI----QKVVIALGDHLNAKC 411
S TGKT +F + I+Q ++ ++E A+I+APTRELA QI + +++ D++ K
Sbjct: 46 SQTGTGKTLSFLLPIVQNVNPELQEMQAIIVAPTRELAWQIHEELKSILVKQPDYI--KT 103
Query: 412 HACIGGTMSVKIFANWRLVFMLLWVTPGRVYDL 510
GG + ++ ++ TPGR+ DL
Sbjct: 104 SLITGGMDRERQIGRVKVSPQIVIGTPGRILDL 136
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 48.8 bits (111), Expect = 9e-05
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTS----IRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
TGKTA+F++ I++++ + R AL+LAPTRELA Q+ + G L + +
Sbjct: 52 TGKTASFALPIIEKLSKNPIDGYRPVRALVLAPTRELAIQVADNTLEYGRDLGMRVISVY 111
Query: 424 GGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
GG + +L TPGR+ DL+
Sbjct: 112 GGVPVENQIKRLKRGTDILVATPGRLLDLL 141
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 48.8 bits (111), Expect = 9e-05
Identities = 22/53 (41%), Positives = 35/53 (66%)
Frame = +2
Query: 89 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 247
D D + V F ++ L+ ELLR + A G+E+P+ IQ+ A+ P + GRD++ QA
Sbjct: 49 DIDPAEDVAGFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQA 101
Score = 41.9 bits (94), Expect = 0.011
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Frame = +1
Query: 256 TGKTATFSISILQQID---TSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIG 426
TGKTA F++ +L ++ T AL+L PTRELA Q+ + + G L A+ G
Sbjct: 105 TGKTAAFALPLLHRLTDDRTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLGARVLPVYG 164
Query: 427 GT-MSVKIFANWRLVFMLLWVTPGRVYD 507
G + ++ A + V +++ TPGR D
Sbjct: 165 GAPIGRQVRALVQGVDVVV-ATPGRALD 191
>UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Marinomonas|Rep: DEAD/DEAH box helicase domain
protein - Marinomonas sp. MWYL1
Length = 417
Score = 48.8 bits (111), Expect = 9e-05
Identities = 35/94 (37%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Frame = +1
Query: 241 SSPVRTGKTATFSISILQQI----DTSIRECXALILAPTRELAQQIQKVVIALGDHLNAK 408
++P TGKT F +Q I + S LILAP+RELA+QI VV L H +
Sbjct: 60 TAPTGTGKTIAFCAPAVQHILDRDEQSTTAPKVLILAPSRELARQIFNVVEQLTKHTRIQ 119
Query: 409 CHACIGGTMSVKIFANWRLVFMLLWVTPGRVYDL 510
H IGGT +L TPGR+ +L
Sbjct: 120 SHLIIGGTPYGMQQQQLSEPCDILVATPGRLVEL 153
>UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Desulfuromonadales|Rep: DEAD/DEAH box helicase
domain protein - Geobacter bemidjiensis Bem
Length = 482
Score = 48.8 bits (111), Expect = 9e-05
Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIR-----ECXALILAPTRELAQQIQKVVIALGDHLNAKCHAC 420
TGKTATF ISI ++ + + ALILAPTREL QI+K ALG + A
Sbjct: 49 TGKTATFLISIFTKLLSQAKTGGEHHPRALILAPTRELVVQIEKDAQALGKYTGFNIQAI 108
Query: 421 IGGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
GG +K + ++ TPGR+ D +
Sbjct: 109 YGGVDYMKQRDALKAGADIVIGTPGRLIDYL 139
Score = 36.3 bits (80), Expect = 0.54
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEKLLLSLYRFYNK 298
F ++ + E+ +GI GF + + IQ++A+ + G+DV QAQ+ K L + K
Sbjct: 3 FTELQIPAEVQKGIDETGFTQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIFTK 62
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 48.8 bits (111), Expect = 9e-05
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIR-----ECXALILAPTRELAQQIQKVVIALGDHLNAKCHAC 420
TGKTA F++ IL+++ + R + L+L PTRELA Q+ + + + L K
Sbjct: 49 TGKTAAFALPILEKLSSKERNKKRPQTRVLVLVPTRELANQVTQNIKSYAKKLPFKTLPV 108
Query: 421 IGGTMSVKIFANWRLVFMLLWVTPGRVYDLINFVRALHAKHHQTFWF 561
GG S + ++ TPGR+ DL AL +H T F
Sbjct: 109 FGGVSSYPQIQALKSGIDIVVATPGRLLDLA-LQNALSLEHIDTLVF 154
Score = 35.9 bits (79), Expect = 0.72
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
F D +L +L + ++ P+ IQQ AI +QG+D++A A++
Sbjct: 3 FSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQGKDILAGART 47
>UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep:
RNA helicase - Guillardia theta (Cryptomonas phi)
Length = 381
Score = 48.8 bits (111), Expect = 9e-05
Identities = 33/86 (38%), Positives = 48/86 (55%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKT +F I ILQ I + ++IL PTRELA QI ++ L ++ + + G
Sbjct: 63 TGKTLSFLIPILQNIYSESYGIESIILVPTRELALQISSLLRKLSKYMK-NINLQVTGVD 121
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLI 513
S KI N + F +L TPG++YD +
Sbjct: 122 S-KIDKN-NIDFNILLGTPGKIYDCL 145
>UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1022
Score = 48.8 bits (111), Expect = 9e-05
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Frame = +1
Query: 214 LHPRTRCYRSSPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGD 393
+ P + + TGKTA F +++L +ID ++ + LAPT ELA+QI +VV +G
Sbjct: 654 MEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGK 713
Query: 394 HL-NAKCHACI-GGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
+ N K H I GG M+ +L ++ TPG D +
Sbjct: 714 FIDNLKIHYAIKGGNMAA--MRGRKLTEQIVIGTPGITRDYL 753
>UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_32,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 431
Score = 48.8 bits (111), Expect = 9e-05
Identities = 32/92 (34%), Positives = 45/92 (48%)
Frame = +1
Query: 241 SSPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHAC 420
SS +GKTA FS ILQ + A+IL RELA QI + + G +N +
Sbjct: 50 SSQTGSGKTAAFSFPILQTLSQDPYGIFAIILTANRELAVQIAEQIQIFGASVNLRLALL 109
Query: 421 IGGTMSVKIFANWRLVFMLLWVTPGRVYDLIN 516
IGG S K + ++ TPGR +L++
Sbjct: 110 IGGLSSSKQVKLLGQIPHIIVGTPGRCAELLS 141
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 48.8 bits (111), Expect = 9e-05
Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG-T 432
TGKT +SIS+LQ+I LI+APTRELA QI + V + + A GG +
Sbjct: 50 TGKTGAYSISMLQEIKEG-GGIQGLIVAPTRELAVQITEEVKKFAKYTKVRPVAIYGGQS 108
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLI 513
M V++ A R +L+ TPGR+ D I
Sbjct: 109 MGVQLDALKRGAEILV-ATPGRLIDHI 134
Score = 39.1 bits (87), Expect = 0.077
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
F+++ +K+ +L + GFEK IQ+ AI + GRDV+ QA +
Sbjct: 4 FEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQAHT 48
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 48.8 bits (111), Expect = 9e-05
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLN-AKCHACIGGT 432
TGKTA F+I +L +ID + + AL+L PTRELA Q+ + G +L+ GG+
Sbjct: 61 TGKTAAFAIPMLSKIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGS 120
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYD 507
A R ++ TPGR+ D
Sbjct: 121 SYAVQLAGLRRGAQVVVGTPGRMID 145
Score = 37.9 bits (84), Expect = 0.18
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
TF D+ + +LR I G+E P+AIQ I + G DV+ AQ+
Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQT 59
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 48.8 bits (111), Expect = 9e-05
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGT 432
TGKT F+ L + L+LAPTRE+A QI VV+A+G + +CH IGG
Sbjct: 74 TGKTCVFTTIALDSLILENATTQVLVLAPTREIAVQIHAVVMAIGSAMEGLECHVFIGGR 133
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLI 513
+ + + + + +PGR+ LI
Sbjct: 134 PISQDKQHLKKCHIAIG-SPGRIKQLI 159
Score = 36.3 bits (80), Expect = 0.54
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
F + L + +L G+ A GF++PS IQ +AI G D+I QA+S
Sbjct: 28 FSSLLLSKPVLEGLSASGFQRPSPIQLKAIPLGRCGLDLIVQAKS 72
>UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP8 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 619
Score = 48.8 bits (111), Expect = 9e-05
Identities = 27/94 (28%), Positives = 46/94 (48%)
Frame = +1
Query: 232 CYRSSPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKC 411
C + +GKT F++ I+++I A++L PTRELA Q+ + + +G L
Sbjct: 192 CIGGAKTGSGKTMAFALPIVERIARDPFGVWAVVLTPTRELAYQLSEQFLVIGKPLGLTT 251
Query: 412 HACIGGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
+GG +K ++ TPGR+ DL+
Sbjct: 252 ATIVGGMDMMKQAQELEARPHIIVATPGRLCDLL 285
Score = 34.7 bits (76), Expect = 1.7
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
TF+ + L L+ + + +KP+ IQ + P + GRD I A++
Sbjct: 153 TFESLGLSHPLITALASINIKKPTEIQAACVEPILSGRDCIGGAKT 198
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 48.8 bits (111), Expect = 9e-05
Identities = 24/49 (48%), Positives = 36/49 (73%), Gaps = 2/49 (4%)
Frame = +2
Query: 113 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQS 253
++FD++ L ELL+GIYA F+KPS IQ+RA+ + R++IAQ+QS
Sbjct: 92 KSFDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQS 140
Score = 43.6 bits (98), Expect = 0.004
Identities = 29/99 (29%), Positives = 48/99 (48%)
Frame = +1
Query: 217 HPRTRCYRSSPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDH 396
+P S TGKTA FS+++L +++ A+ LAP+RELA+Q +VV +G
Sbjct: 129 NPPRNMIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTLEVVQEMGKF 188
Query: 397 LNAKCHACIGGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
+ + N ++ ++ TPG V DL+
Sbjct: 189 TKITSQLIVPDSFE----KNKQINAQVIVGTPGTVLDLM 223
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 48.4 bits (110), Expect = 1e-04
Identities = 36/92 (39%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Frame = +1
Query: 256 TGKTATFSISILQ----QIDTSIRECX----ALILAPTRELAQQIQKVVIALGDHLNAKC 411
TGKTA+FS+ I+Q Q +TS ALIL PTRELA Q+ V A H +
Sbjct: 59 TGKTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRS 118
Query: 412 HACIGGTMSVKIFANWRLVFMLLWVTPGRVYD 507
GG A R +L TPGR+ D
Sbjct: 119 AVVFGGVDMNPQMAELRRGVEILIATPGRLLD 150
Score = 41.1 bits (92), Expect = 0.019
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
TFD L E+L+ I G+ P+ IQ +AI + GRDV+ AQ+
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQT 57
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 48.4 bits (110), Expect = 1e-04
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDH--LNAKCHA 417
S +GKT + + I Q+ID+S RE ALILAPT EL QI K + L + L
Sbjct: 47 SQTGSGKTLAYLLPIFQKIDSSKRETQALILAPTHELVMQIDKQIKTLSSNAGLTINSTV 106
Query: 418 CIGGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
IG V+ + ++ + GRV +LI
Sbjct: 107 MIGEVNIVRQIEKLKEKPHIIVGSTGRVLELI 138
Score = 41.1 bits (92), Expect = 0.019
Identities = 19/64 (29%), Positives = 36/64 (56%)
Frame = +2
Query: 107 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEKLLLSLYR 286
+V +FD + + ++ G+ G + P+AIQ+ AI ++ +D+I Q+Q+ K L L
Sbjct: 1 MVTSFDKLEIDADIAEGLSKQGIKNPTAIQKVAIPLALKNKDIIGQSQTGSGKTLAYLLP 60
Query: 287 FYNK 298
+ K
Sbjct: 61 IFQK 64
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = +2
Query: 104 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+V T++ M LK EL+ I G+EKPS IQQRAI QG++++ Q+Q+
Sbjct: 17 EVYPTWESMKLKPELIEAIKKNGWEKPSPIQQRAIYIISQGKNIMFQSQN 66
Score = 48.0 bits (109), Expect = 2e-04
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG-T 432
+GKTATFSI L ++ + + +I++PTRELA Q + + +LG A AC+GG +
Sbjct: 68 SGKTATFSIGTLARLRLTSKTTELIIVSPTRELAIQTENTLKSLG----ANTRACVGGNS 123
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLI 513
+ + A + + + TPGR+ L+
Sbjct: 124 LGADVKALQKGIHCVSG-TPGRILQLL 149
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 48.4 bits (110), Expect = 1e-04
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGT 432
+GKTA FS+ +LQ +D ++ L+LAPTRELA Q+ + + H+ A GG
Sbjct: 54 SGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQ 113
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYD 507
R ++ TPGR+ D
Sbjct: 114 RYDVQLRALRQGPQIVVGTPGRLLD 138
Score = 43.6 bits (98), Expect = 0.004
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
TF D+ LK +L + G+EKPS IQ I + GRDV+ AQ+
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQT 52
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 48.4 bits (110), Expect = 1e-04
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = +1
Query: 217 HPRTRCYRSSPVRTGKTATFSISILQQID-TSIRECXALILAPTRELAQQIQKVVIALGD 393
+P S TGKT F ++IL ++D + AL LAP+RELA+QIQ V+ ++G
Sbjct: 133 NPPRNMIAQSQSGTGKTGAFVVTILSRVDFNQPNQPQALALAPSRELARQIQSVIQSIGQ 192
Query: 394 HLNA-KCHACIGGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
A I G +S + +V TPG V DLI
Sbjct: 193 FCTGLVVDAAIPGAISRETGVKANVVV----GTPGTVMDLI 229
>UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 585
Score = 48.0 bits (109), Expect = 2e-04
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Frame = +1
Query: 256 TGKTATFSISILQQI--------DTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKC 411
TGKT + I ++Q + +TS AL+LAPTRELA QIQK + L +
Sbjct: 224 TGKTFAYLIPLIQFVLKLPKLTEETSASGPYALVLAPTRELALQIQKETLKLATPFGLRV 283
Query: 412 HACIGGTMSVKIFANWRLVFMLLWVTPGRVYDLIN 516
CIGG ++ PGR+ DL+N
Sbjct: 284 CCCIGGEPMQPQIEELSNGAEIVVAAPGRLKDLLN 318
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 48.0 bits (109), Expect = 2e-04
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Frame = +1
Query: 256 TGKTATFSISILQQI----DTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
TGKTA F I +L + + + L++APTRELA QI +V +G + +
Sbjct: 49 TGKTAAFVIPVLNTLINVKKSEHTDISCLVMAPTRELAVQISEVFKKIGAYTRLRTVCIT 108
Query: 424 GGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
GG A +L TPGR++DLI
Sbjct: 109 GGVEQEAQIAAADYGIDILVATPGRMFDLI 138
Score = 33.9 bits (74), Expect = 2.9
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
F+ +L + + + GF +P+ IQ ++I P + G DV+A AQ+
Sbjct: 3 FESYDLAPGIKKSLAEAGFNRPTDIQFKSIPPILAGEDVLAIAQT 47
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 48.0 bits (109), Expect = 2e-04
Identities = 34/89 (38%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSI-----RECXALILAPTRELAQQIQKVVIALGDHLNAKCHAC 420
TGKTA F + IL +I + R C AL+LAPTRELA QI G
Sbjct: 105 TGKTAAFVLPILHRIAANRARPAPRACRALVLAPTRELATQIADAARTYGKFTRPSVAVV 164
Query: 421 IGGTMSVKIFANWRLVFMLLWVTPGRVYD 507
IGG LL TPGR+ D
Sbjct: 165 IGGAKPGPQARRMESGVDLLVATPGRLLD 193
Score = 38.3 bits (85), Expect = 0.13
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 95 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
D V+ F + L E LLR I +E P+ IQ R+I ++G D++ AQ+
Sbjct: 51 DESAVLTDFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQT 103
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 48.0 bits (109), Expect = 2e-04
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIAL-GDHLNAKCHACIGGT 432
TGKT + I+++Q + +I + A+I+ PTRELA Q+Q L + KC A IGGT
Sbjct: 73 TGKTLIYVIAVVQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGT 132
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDL 510
K +++ TPGR+ L
Sbjct: 133 DVAKDRKRMNESRVIIG-TPGRLLHL 157
>UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8;
Aconoidasida|Rep: DEAD-box helicase 1 - Plasmodium
falciparum
Length = 457
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/49 (48%), Positives = 29/49 (59%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEK 265
F D LK ELLR I GFE PS +QQ I I G D++ QA+S + K
Sbjct: 57 FKDFFLKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGK 105
>UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 variant;
n=9; Coelomata|Rep: DEAD box polypeptide 47 isoform 1
variant - Homo sapiens (Human)
Length = 182
Score = 48.0 bits (109), Expect = 2e-04
Identities = 28/84 (33%), Positives = 43/84 (51%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
+GKT F++ IL + + + AL+L PTRELA QI + ALG + + +GG
Sbjct: 61 SGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGID 120
Query: 436 SVKIFANWRLVFMLLWVTPGRVYD 507
S+ ++ TPGR+ D
Sbjct: 121 SMSQSLALAKKPHIIIATPGRLID 144
Score = 36.7 bits (81), Expect = 0.41
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 101 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
++ +TF D+ + + L G+ KP+ IQ AI +QGRD+I A++
Sbjct: 9 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAET 59
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 48.0 bits (109), Expect = 2e-04
Identities = 36/96 (37%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Frame = +1
Query: 241 SSPVRTGKTATFSISILQQIDT------SIRECXALILAPTRELAQQIQKVVIALGDHLN 402
S+ TGKTA F++ +LQ + T R ALIL PTRELA QI + V +LN
Sbjct: 44 SAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN 103
Query: 403 AKCHACIGGTMSVKIFANWRLVFMLLWVTPGRVYDL 510
+ GG R +L TPGR+ DL
Sbjct: 104 IRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDL 139
Score = 45.6 bits (103), Expect = 9e-04
Identities = 18/46 (39%), Positives = 32/46 (69%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+FD + L ++LR + G+ +P+ IQQ+AI ++GRD++A AQ+
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQT 47
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 48.0 bits (109), Expect = 2e-04
Identities = 28/84 (33%), Positives = 43/84 (51%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
+GKT F++ IL + + + AL+L PTRELA QI + ALG + + +GG
Sbjct: 72 SGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGID 131
Query: 436 SVKIFANWRLVFMLLWVTPGRVYD 507
S+ ++ TPGR+ D
Sbjct: 132 SMSQSLALAKKPHIIIATPGRLID 155
Score = 36.7 bits (81), Expect = 0.41
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 101 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
++ +TF D+ + + L G+ KP+ IQ AI +QGRD+I A++
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAET 70
>UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 457
Score = 47.6 bits (108), Expect = 2e-04
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Frame = +2
Query: 110 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRA--IMPCIQGRDVIAQAQS 253
V++F+++ LK ELL+G+Y GF +PS IQ+ A +M +++IAQ+QS
Sbjct: 37 VKSFEELRLKPELLKGVYQMGFNRPSRIQENALPLMMAQPAQNLIAQSQS 86
Score = 37.1 bits (82), Expect = 0.31
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Frame = +1
Query: 220 PRTRCYRSSPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDH- 396
P S TGKTA F +++L ++ + + L +APT ELA QI +V+ +G
Sbjct: 76 PAQNLIAQSQSGTGKTAAFCLAMLGIVNPADKWPQCLCIAPTYELALQIGQVLEQMGRFC 135
Query: 397 LNAKCHACIGGTMSVKIFANWRLVFMLLWVTPGRVYD 507
+ + + G +I ++ ++ TPG VYD
Sbjct: 136 ADVRLVYAVRGN---RIVRGTKVQEQIVVGTPGTVYD 169
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 47.6 bits (108), Expect = 2e-04
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Frame = +1
Query: 256 TGKTATFSISILQQI-----DTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHAC 420
+GKTA FS+ ILQ+I + ALILAPTRELA QI++ + + +
Sbjct: 135 SGKTAAFSLPILQKIIGLGDKRRPKTARALILAPTRELAVQIEQTIRNVSKSAHISTALV 194
Query: 421 IGGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
+GG + +L TPGR+ DL+
Sbjct: 195 LGGVSKLSQIKRIAPGIDVLIATPGRLTDLM 225
Score = 33.1 bits (72), Expect = 5.0
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
F + + LL+G+ A G +P IQ +AI ++G+D++ AQ+
Sbjct: 89 FAALGITGVLLKGVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQT 133
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 47.6 bits (108), Expect = 2e-04
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Frame = +1
Query: 235 YRSSPVRTGKTATFSISILQQI-----DTSIRECXALILAPTRELAQQIQKVVIALGDHL 399
+ ++ TGKTA FS+ ++QQ+ S + ALI APTRELA+QI + A +
Sbjct: 42 FATAQTGTGKTAAFSLPLIQQLLESGKSASRKTARALIFAPTRELAEQIADNIKAYTKYT 101
Query: 400 NAKCHACIGGTMSVKIFANWRLV---FMLLWVTPGRVYDLI 513
N A GG K+ + R++ +L TPGR+ + I
Sbjct: 102 NLSVAAIFGGR---KMSSQERMLENGVDILVATPGRLEEHI 139
Score = 32.7 bits (71), Expect = 6.7
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+F E+++ + G+EK + IQQ+AI +G D+ A AQ+
Sbjct: 2 SFASQGFAPEVVKALEECGYEKLTPIQQKAIPVARRGHDIFATAQT 47
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 47.6 bits (108), Expect = 2e-04
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECX--ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 429
TGKTA F + I+Q + R ALIL PTRELAQQ+ + +H + + C+ G
Sbjct: 55 TGKTAAFGLPIIQAVQQKKRNGTPHALILVPTRELAQQVFDNLTQYAEHTDLRI-VCVYG 113
Query: 430 TMSVKIFAN-WRLVFMLLWVTPGRVYD 507
S+ + N +L TPGR+ D
Sbjct: 114 GTSIGVQKNKLEEGADILIATPGRLLD 140
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 47.6 bits (108), Expect = 2e-04
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI-GGT 432
TGKTA F + L +ID S+++ L++ PTRELA Q+ + + + A + GG
Sbjct: 56 TGKTAAFGLPALAKIDASVKQTQVLVVTPTRELAIQVAEALEGFAAKMRGVGVATVYGGA 115
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLIN 516
+ ++ TPGR+ DL+N
Sbjct: 116 PFGPQVKALKQGTAIVVGTPGRLIDLLN 143
Score = 35.9 bits (79), Expect = 0.72
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+F+DM L +L + A F P+ IQ +AI ++G+DV+ +AQ+
Sbjct: 9 SFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEGQDVLGEAQT 54
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 47.6 bits (108), Expect = 2e-04
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIR----ECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
TGKTA F++ +L+ + + + AL+L PTRELA Q+ + V G +L +
Sbjct: 49 TGKTAGFTLPLLELLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVF 108
Query: 424 GGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
GG R +L TPGR+ DL+
Sbjct: 109 GGVPINPQIQKLRHGVDVLVATPGRLLDLV 138
>UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n=3;
Leishmania|Rep: ATP-dependent RNA helicase, putative -
Leishmania major
Length = 625
Score = 47.6 bits (108), Expect = 2e-04
Identities = 29/86 (33%), Positives = 43/86 (50%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
+GKTA F++ ILQ + AL+L P+RELA QI IA G L + +GG
Sbjct: 50 SGKTAAFALPILQTLAADAYGVFALVLTPSRELAYQIIDQFIAFGAPLRVRTMLAVGGVP 109
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLI 513
+ + ++ TPGR+ L+
Sbjct: 110 TETQVDALKARPHIVAATPGRLRHLL 135
>UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 703
Score = 47.6 bits (108), Expect = 2e-04
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQID--TSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHA 417
S +GKTA+F + I+Q+++ ++I C LI+ P+RELA Q N KC
Sbjct: 44 SKTGSGKTASFLLPIVQKLNEHSTITGCRCLIITPSRELALQTGHYFQKYASQTNLKCAQ 103
Query: 418 CIGGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
IGG F + ++ TPGR+ +I
Sbjct: 104 IIGGEALPPQFESLTKNPDVIIATPGRLLQII 135
>UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 441
Score = 47.6 bits (108), Expect = 2e-04
Identities = 30/90 (33%), Positives = 43/90 (47%)
Frame = +1
Query: 232 CYRSSPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKC 411
C S TGKTA F++ I+ + AL+++PTRELAQQI + G +NA
Sbjct: 43 CIVISQTGTGKTAAFALPIISTLSKDPYGIYALVISPTRELAQQICQQFKIFGRGMNADI 102
Query: 412 HACIGGTMSVKIFANWRLVFMLLWVTPGRV 501
IGG + ++ TPGR+
Sbjct: 103 CPIIGGLAITDQASALEKNPHIVVATPGRI 132
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 47.6 bits (108), Expect = 2e-04
Identities = 28/87 (32%), Positives = 45/87 (51%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKTA F I I+++++ AL++APTRELA Q+ + + +G + GG
Sbjct: 50 TGKTAAFGIPIVEKVNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQD 109
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLIN 516
+ + ++ TPGR+ D IN
Sbjct: 110 IERQIRALKKHPHVIVGTPGRIIDHIN 136
Score = 41.9 bits (94), Expect = 0.011
Identities = 18/46 (39%), Positives = 30/46 (65%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
TF ++ L +E+++ I GFE+ + IQ + I +Q +DVI QAQ+
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQT 48
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 47.6 bits (108), Expect = 2e-04
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Frame = +1
Query: 256 TGKTATFSISILQQI---DTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIG 426
+GKTA F + IL+++ + +IL PTRELA Q V + L H + K +G
Sbjct: 341 SGKTAAFVVPILERLLYRPKKVPTTRVVILTPTRELAIQCHAVAVKLASHTDIKFCLAVG 400
Query: 427 GTMSVKI-FANWRLVFMLLWVTPGRVYD 507
G +S+K+ A RL ++ TPGR D
Sbjct: 401 G-LSLKVQEAELRLRPDVVIATPGRFID 427
Score = 41.1 bits (92), Expect = 0.019
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +2
Query: 110 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 247
+ +F +M+L +LRG+ + GF KP+ IQ + I + G+DV+ A
Sbjct: 292 MSSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGA 337
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 47.6 bits (108), Expect = 2e-04
Identities = 31/90 (34%), Positives = 46/90 (51%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
S +GKTA+F I + + + + ALIL PTRELA Q+++ + +G K A
Sbjct: 46 SQTGSGKTASFGIPLCELANWDENKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVF 105
Query: 424 GGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
G + K A + ++ TPGRV D I
Sbjct: 106 GKSSFDKQKAELKQKSHIVVGTPGRVLDHI 135
>UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to
R27090_2 - Ornithorhynchus anatinus
Length = 332
Score = 47.2 bits (107), Expect = 3e-04
Identities = 31/92 (33%), Positives = 43/92 (46%)
Frame = +1
Query: 232 CYRSSPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKC 411
C + +GKTA F + ILQ++ L+L PTRELA QI + LG L K
Sbjct: 42 CMGCAKTGSGKTAAFVLPILQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKD 101
Query: 412 HACIGGTMSVKIFANWRLVFMLLWVTPGRVYD 507
+GG V + ++ TPGR+ D
Sbjct: 102 CIVVGGMDMVTQALDLSRKPHVVIATPGRLAD 133
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 47.2 bits (107), Expect = 3e-04
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGG 429
TGKT F I L+ ID I LILAPTRE+A QI +V ++G + + K IGG
Sbjct: 44 TGKTLVFCIISLEMIDIDISSVQVLILAPTREIAVQIAQVFSSVGCEIKDLKVEVFIGG 102
Score = 33.1 bits (72), Expect = 5.0
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +2
Query: 128 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEKLLL 274
M +++L G+ GF++PS IQ +AI G D+I +A+S K L+
Sbjct: 1 MGFSQKILDGLSVCGFQRPSPIQLKAIPLGRCGFDLIMRAKSGTGKTLV 49
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 47.2 bits (107), Expect = 3e-04
Identities = 28/90 (31%), Positives = 46/90 (51%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
S +GKTA+F I + + ++ + AL+L PTRELA Q+++ + +G K A
Sbjct: 48 SQTGSGKTASFGIPLCEMVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIY 107
Query: 424 GGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
G + + + ++ TPGRV D I
Sbjct: 108 GKSPFARQKLELKQKTHIVVGTPGRVLDHI 137
>UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1128, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 372
Score = 47.2 bits (107), Expect = 3e-04
Identities = 19/51 (37%), Positives = 37/51 (72%)
Frame = +2
Query: 101 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
D+ +TF+++ L+ L+R + G EKP++IQ+ AI ++G+DV+A+A++
Sbjct: 20 DEESKTFEELGLEPSLIRALIKMGIEKPTSIQEVAIPLILEGKDVVARAKT 70
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 47.2 bits (107), Expect = 3e-04
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHL---NAKCHACIG 426
TGKT +F I ILQ ++ + AL+L TRELA Q KV L ++ + IG
Sbjct: 69 TGKTGSFLIPILQMVNPAKDHIQALVLLHTRELAMQTAKVAKTLSKNMPDVTGRIMCAIG 128
Query: 427 GTMSVKIFANWRLVFMLLWVTPGRVYDLIN 516
G + R +++ TPGR+ LI+
Sbjct: 129 GVSIAEDRERAREKPLVVLATPGRLQQLID 158
Score = 38.3 bits (85), Expect = 0.13
Identities = 17/45 (37%), Positives = 30/45 (66%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
F + LK+ELL G+ GF++ + +Q+ AI + RDV+A+A++
Sbjct: 23 FSSLGLKQELLMGLTQEGFQQLTPVQELAIPHILARRDVVARAKN 67
>UniRef50_Q389T9 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=3; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma brucei
Length = 520
Score = 47.2 bits (107), Expect = 3e-04
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
+GKTA F + +LQ + AL+L P+RELA QI +ALG L+ + IGG
Sbjct: 50 SGKTAAFVLPLLQILAEDPYGVFALVLTPSRELAYQILDQFVALGAPLHIRAALAIGGVP 109
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLI-NFVRALHAKHHQTFWFLMKLD 576
+ + ++ TPGR+ L+ F A A H F L + D
Sbjct: 110 HEQQVSVLHGRPHVVVATPGRLKFLLGTFPEARKAFSHLRFLVLDEAD 157
>UniRef50_Q9SW44 Cluster: DEAD-box ATP-dependent RNA helicase 16;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 16 - Arabidopsis thaliana (Mouse-ear cress)
Length = 626
Score = 47.2 bits (107), Expect = 3e-04
Identities = 23/70 (32%), Positives = 40/70 (57%)
Frame = +2
Query: 101 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEKLLLSL 280
++ ++F+++ L L+R + G EKP+ IQQ AI ++G+DV+A+A++ K L L
Sbjct: 42 EEAPKSFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYL 101
Query: 281 YRFYNKSIQA 310
K A
Sbjct: 102 LPLLQKLFSA 111
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 47.2 bits (107), Expect = 3e-04
Identities = 31/84 (36%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +2
Query: 17 DSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVET-FDDMNLKEELLRGIYAYGFEKPSAI 193
D + P Q S PP D + + + + F D LK ELLR I GFE PS +
Sbjct: 14 DEEEEPQAPQESTPAPPKKD---IKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEV 70
Query: 194 QQRAIMPCIQGRDVIAQAQSELEK 265
Q I I G DV+ QA+S + K
Sbjct: 71 QHECIPQAILGMDVLCQAKSGMGK 94
Score = 36.7 bits (81), Expect = 0.41
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +1
Query: 259 GKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTMS 438
GKTA F ++ LQQI+ + L++ TRELA QI K ++ + + G +S
Sbjct: 93 GKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLS 152
Query: 439 VK 444
+K
Sbjct: 153 IK 154
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 46.8 bits (106), Expect = 4e-04
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Frame = +1
Query: 256 TGKTATFSISILQQ-----IDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHAC 420
TGKTA+F++ IL + I + L+L+PTREL+ QI A G H+
Sbjct: 64 TGKTASFALPILHRLLEHRIKPQPKTTRVLVLSPTRELSGQILDSFNAYGRHIRLSSTLA 123
Query: 421 IGGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
IGG + + +L TPGR+ DL+
Sbjct: 124 IGGVPMGRQVRSLMQGVEVLVATPGRLLDLV 154
Score = 34.7 bits (76), Expect = 1.7
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +2
Query: 89 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
D + ++ +F D L E + R + + P+ IQ + I + GRDV+ AQ+
Sbjct: 8 DMERTHLLTSFQDFGLAEPIARALSEENYVTPTPIQAQTIPTALTGRDVVGIAQT 62
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 46.8 bits (106), Expect = 4e-04
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQI-QKVVIALGDHLNAKCHACIGGT 432
TGKT F I I+++I+ I++ +LIL PTREL Q+ +++ L + + GG
Sbjct: 51 TGKTFAFGIPIIEKIEPKIQKTQSLILCPTRELTLQVYEELKKLLRFYQEIRIAVVYGGE 110
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYD 507
K F L+ TPGR D
Sbjct: 111 SYTKQFRALEAKPHLIIATPGRAID 135
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 46.8 bits (106), Expect = 4e-04
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSI----RECXALILAPTRELAQQIQKVVIALGDHLNAKCHA-C 420
+GKTA+F + ILQ + T R AL+L PTRELA Q+ +V A + L K +
Sbjct: 57 SGKTASFVLPILQMLQTKPLGKNRHINALVLVPTRELAVQVGQVFQAFSNALPNKIKSLA 116
Query: 421 IGGTMSVKIFANWRLVFMLLWVTPGRVYDLIN 516
+ G +S+ +L TPGR+ DL++
Sbjct: 117 VYGGVSINPQMIQLQGVEILIATPGRLLDLVD 148
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 46.8 bits (106), Expect = 4e-04
Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 7/93 (7%)
Frame = +1
Query: 256 TGKTATFSISILQQIDT-----SIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHAC 420
TGKTA F++ +L + T + R ALIL+PTRELA QI + + L + H
Sbjct: 52 TGKTAAFALPLLHHLMTVGGKPTTRTTKALILSPTRELAVQIAESIADLSEGTPIS-HCV 110
Query: 421 IGGTMSVK--IFANWRLVFMLLWVTPGRVYDLI 513
+ G +SV+ I A R V +L+ TPGR+ DL+
Sbjct: 111 VFGGVSVRPQIQALARGVDILV-ATPGRLLDLM 142
Score = 36.3 bits (80), Expect = 0.54
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
TFD L E L R + P+ IQ+RAI + GRD++ AQ+
Sbjct: 5 TFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQT 50
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 46.8 bits (106), Expect = 4e-04
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXA-----LILAPTRELAQQIQKVVIALGDHLNAKCHAC 420
TGKTA F++ IL Q+D A L+L+PTRELA QI + G ++ +
Sbjct: 44 TGKTAAFALPILNQLDLDRSRADACAPQVLVLSPTRELAVQIAQSFNVYGRNVKFRLTTI 103
Query: 421 IGGT-MSVKIFANWRLVFMLLWVTPGRVYDLIN 516
GG + ++ A R V + + TPGR+ DL++
Sbjct: 104 FGGVGQNPQVRALKRGVHVAI-ATPGRLLDLMD 135
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 46.8 bits (106), Expect = 4e-04
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +1
Query: 256 TGKTATFSISILQQI-----DTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHAC 420
TGKTA F + +L + + R C LILAPTREL QI + + A + + K
Sbjct: 119 TGKTAAFGLPLLDALMKAGTKPAPRTCRGLILAPTRELVSQICESLRAFTEGSHLKLQVI 178
Query: 421 IGGTMSVKIFANWRLVFMLLWVTPGRVYDLIN 516
+GG L+ TPGR+ DL++
Sbjct: 179 VGGVAIGPQIKRAERGADLIVATPGRLIDLLD 210
Score = 35.5 bits (78), Expect = 0.95
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
FD + L L+ G+ A P+ IQ RAI + GRDV+ AQ+
Sbjct: 73 FDMLGLSPRLVAGLAAQNITDPTPIQTRAIPHGLNGRDVLGIAQT 117
>UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2;
Cryptosporidium|Rep: DEAD-box RNA helicase -
Cryptosporidium hominis
Length = 518
Score = 46.8 bits (106), Expect = 4e-04
Identities = 23/45 (51%), Positives = 32/45 (71%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALG 390
+GKTATF++++L ++DT I + L PTRELA+Q Q VV LG
Sbjct: 161 SGKTATFALAMLGKVDTRIIHPQCMCLCPTRELARQNQDVVNELG 205
Score = 37.9 bits (84), Expect = 0.18
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQS 253
+ D+NL +LL+GIY GF +PS IQ A+ + ++IAQA +
Sbjct: 114 WSDLNLSPDLLKGIYNKGFNRPSKIQAAALPLILNSPMNLIAQAHN 159
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 46.8 bits (106), Expect = 4e-04
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Frame = +1
Query: 241 SSPVRTGKTATFSISILQQI---DTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKC 411
S+ +GKTA F + +L+++ D+ R LIL PTRELA Q Q V+ L N
Sbjct: 233 SASTGSGKTAAFLLPVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQFSNITS 292
Query: 412 HACIGGTMSVKIFANWRLVFMLLWVTPGRVYD-LIN 516
+GG + R ++ TPGR+ D L+N
Sbjct: 293 CLIVGGLSNKAQEVELRKSPDVVIATPGRLIDHLLN 328
Score = 42.7 bits (96), Expect = 0.006
Identities = 16/51 (31%), Positives = 33/51 (64%)
Frame = +2
Query: 101 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
++ + TF++++L LL+ + GF +P+ IQ +AI + G+D++A A +
Sbjct: 186 EEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASAST 236
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 46.8 bits (106), Expect = 4e-04
Identities = 21/52 (40%), Positives = 34/52 (65%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKC 411
+GKTATF++++L +++ ++ AL + PTRELA Q +V+ LG KC
Sbjct: 148 SGKTATFALAMLSKVNVNVPLVQALCICPTRELATQNVQVIQKLGQFTQIKC 199
Score = 35.1 bits (77), Expect = 1.3
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQS 253
+ + L +LL+GI GF KPS IQQ A +P I G ++IAQA++
Sbjct: 101 WSQLPLSPDLLKGIQNMGFAKPSKIQQCA-LPLILGSCTNIIAQAKN 146
>UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 643
Score = 46.8 bits (106), Expect = 4e-04
Identities = 36/99 (36%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +1
Query: 241 SSPVRTGKTATFSISILQQIDTS--IRECXALILAPTRELAQQIQKVVIALGDHLNAKCH 414
SS +GKTA F I ILQ+ S ALI+ PTRELA QI +V L + +
Sbjct: 233 SSLTGSGKTAAFLIPILQKFYRSPFTNYSKALIVTPTRELAFQIYEVFTKLNKYTKLRAC 292
Query: 415 ACIGGTMSVKIFANWRLVFMLLWVTPGRVYDLINFVRAL 531
IG + K A R ++ TPGR+ D + R++
Sbjct: 293 LVIGQSAMQKQEAELRGNPEVIIATPGRLIDHLQNSRSI 331
>UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX49;
n=34; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX49 - Homo sapiens (Human)
Length = 483
Score = 46.8 bits (106), Expect = 4e-04
Identities = 31/92 (33%), Positives = 42/92 (45%)
Frame = +1
Query: 232 CYRSSPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKC 411
C + +GKTA F + ILQ++ L+L PTRELA QI + LG L K
Sbjct: 42 CLGCAKTGSGKTAAFVLPILQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKD 101
Query: 412 HACIGGTMSVKIFANWRLVFMLLWVTPGRVYD 507
+GG V ++ TPGR+ D
Sbjct: 102 CIIVGGMDMVAQALELSRKPHVVIATPGRLAD 133
>UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 21a; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a -
Strongylocentrotus purpuratus
Length = 657
Score = 46.4 bits (105), Expect = 5e-04
Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Frame = +1
Query: 256 TGKTATFSISIL---QQI-DTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
TGKT +F + ++ QQ S R+ L LAPTRELA+QI + A+G HL+ C
Sbjct: 150 TGKTLSFVLPLVEKWQQFPQKSGRQPIILALAPTRELAKQISEYFEAIGPHLSTTC--IY 207
Query: 424 GGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
GGT + R ++ TPGR+ D I
Sbjct: 208 GGTSYWPQESAIRRGLDVVVGTPGRILDYI 237
Score = 37.1 bits (82), Expect = 0.31
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +2
Query: 23 KNGPSKDQGSY-DGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQ 199
KNG + G + P G +D + + + F + ++ + + ++A G + IQ
Sbjct: 71 KNGEVQQNGIVKEKPSSSKQGEVDEETQEKIGAFSNFGIRPKTIEKLHAKGVKYLFPIQA 130
Query: 200 RAIMPCIQGRDVIAQAQSELEKLL 271
+ P G DVIAQA++ K L
Sbjct: 131 QTFKPIDDGFDVIAQARTGTGKTL 154
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 46.4 bits (105), Expect = 5e-04
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Frame = +1
Query: 241 SSPVRTGKTATFSISILQQIDTSIR----ECXALILAPTRELAQQIQKVVIALGDHLNAK 408
S+ TGKTA F + I++ + + + +L+L PTRELA Q++ A +L +
Sbjct: 67 SAQTGTGKTAAFILPIIELLRAEDKPKRYQVHSLVLTPTRELAAQVEASAKAYTKYLALR 126
Query: 409 CHACIGGTMSVKIFANWRLVFMLLWVTPGRVYDLIN 516
A GG + +L TPGR+ DLIN
Sbjct: 127 SDAVFGGVSIRPQVKRLQGGVDILVATPGRLLDLIN 162
Score = 37.1 bits (82), Expect = 0.31
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
TF+ + L E +R I G+ P+ IQ I +QG+D++A AQ+
Sbjct: 25 TFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDIMASAQT 70
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 46.4 bits (105), Expect = 5e-04
Identities = 23/61 (37%), Positives = 37/61 (60%)
Frame = +2
Query: 89 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEKL 268
D + Q + TF+DM L + L + + A F P+ +Q++AI P + GRD++A AQ+ K
Sbjct: 19 DPERRQRLTTFNDMPLSDVLKQRLEAAQFINPTPVQEKAIPPALDGRDILATAQTGTGKT 78
Query: 269 L 271
L
Sbjct: 79 L 79
Score = 41.5 bits (93), Expect = 0.014
Identities = 30/85 (35%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQI-DTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 432
TGKT F I L+ + DT LIL PTRELA Q+ V L +GGT
Sbjct: 75 TGKTLAFIIPALEMLRDTEPCGVQVLILVPTRELAMQVHGVYEQLKGKKLKSAALVMGGT 134
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYD 507
+ R ++ TPGR+ D
Sbjct: 135 SERNQIQSIRSGARVVVATPGRLED 159
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 46.4 bits (105), Expect = 5e-04
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Frame = +1
Query: 241 SSPVRTGKTATFSISILQQIDTSI----RECXALILAPTRELAQQIQKVVIALGDHL--N 402
S+ +GKTA F++ +LQQ+ + R LIL PTRELA Q+ + + +L
Sbjct: 48 SAQTGSGKTAAFALPMLQQLANAPTGTPRPTRGLILVPTRELAAQVGEAIAGFAKYLPQR 107
Query: 403 AKCHACIGGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
K GG N R ++ TPGR+ DL+
Sbjct: 108 VKVAVVFGGVSINPQMMNLRGGADIVVATPGRLLDLL 144
Score = 33.9 bits (74), Expect = 2.9
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +2
Query: 149 LRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
LR I G+ P+AIQ +AI + GRDV+ AQ+
Sbjct: 17 LRAIGDKGYRAPTAIQSQAIPAILLGRDVVGSAQT 51
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 46.4 bits (105), Expect = 5e-04
Identities = 30/87 (34%), Positives = 45/87 (51%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKTA+F I IL ++ AL+L PTRELA Q+ + + +L + + A GG
Sbjct: 52 TGKTASFGIPILNRVIKG-EGLQALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQS 110
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLIN 516
+ R ++ TPGR+ D +N
Sbjct: 111 IELQLRSLRRNPEIIVGTPGRLMDHMN 137
Score = 41.1 bits (92), Expect = 0.019
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 113 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
E F M LK +LL+ I GFEKP+ IQ ++I + G D++ QAQ+
Sbjct: 4 ENFYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQT 50
>UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Kineococcus radiotolerans SRS30216|Rep: DEAD/DEAH
box helicase domain protein - Kineococcus radiotolerans
SRS30216
Length = 590
Score = 46.4 bits (105), Expect = 5e-04
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXA-----LILAPTRELAQQIQKVVIALGDHLNAKCHAC 420
+GKT F + +L ++ R L+L PTRELA Q+ + LGD L+ +
Sbjct: 194 SGKTLGFGLPMLARLAQQKRPRITGAPRGLVLVPTRELAMQVADALRPLGDSLDLRLSVV 253
Query: 421 IGGTMSVKIFANWRLVFMLLWVTPGRVYDLIN 516
+GG + A + +L TPGR+ DLI+
Sbjct: 254 VGGVPYGRQIAALQRGIDVLIATPGRLVDLID 285
Score = 41.5 bits (93), Expect = 0.014
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +2
Query: 23 KNGPSKDQGSYDGPPGMDPGTLDTDWDQVVE-TFDDMNLKEELLRGIYAYGFEKPSAIQQ 199
++GP + S+ P + + +V E TF ++ L EEL+ + G P AIQ
Sbjct: 116 RSGPPRSPRSF-APSATEQALTAAEQIEVAESTFAELGLPEELVAALERRGMTAPFAIQS 174
Query: 200 RAIMPCIQGRDVIAQAQSELEKLL 271
R + I GRD++ +A++ K L
Sbjct: 175 RTLPDGIAGRDILGRARTGSGKTL 198
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 46.4 bits (105), Expect = 5e-04
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIR----ECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
TGKTA F++ +L+ + + + AL+L PTRELA Q+ + V G +L +
Sbjct: 49 TGKTAGFTLPLLELLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVF 108
Query: 424 GGTMSVKIFANWRLVFMLLWVTPGRVYDL 510
GG R +L TPGR+ DL
Sbjct: 109 GGVPINPQIQKLRHGVDVLVATPGRLLDL 137
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 46.4 bits (105), Expect = 5e-04
Identities = 25/63 (39%), Positives = 33/63 (52%)
Frame = +1
Query: 325 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTMSVKIFANWRLVFMLLWVTPGRVY 504
AL+LAPTRELAQQIQ+V G +NA GG + ++ TPGR+
Sbjct: 198 ALVLAPTRELAQQIQQVATDFGQRINANNTCVFGGAPKGPQIRDLERGAEIVIATPGRLI 257
Query: 505 DLI 513
D +
Sbjct: 258 DFL 260
Score = 33.5 bits (73), Expect = 3.8
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEKLL 271
F+ L + +L GF KP+AIQ + + + GRD++ AQ+ K L
Sbjct: 124 FEQGGLPDYILEEANKQGFSKPTAIQAQGMPIALSGRDMVGIAQTGSGKTL 174
>UniRef50_Q8X0H1 Cluster: Related to RNA helicase MSS116; n=2;
Neurospora crassa|Rep: Related to RNA helicase MSS116 -
Neurospora crassa
Length = 695
Score = 46.4 bits (105), Expect = 5e-04
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
Frame = +1
Query: 232 CYRSSPVRTGKTATFSISILQQI----DTSIRECXALILAPTRELAQQIQKVVIALGDHL 399
C + TGKT F + L + D + LILAPTRELAQQI L
Sbjct: 139 CLVQAKTGTGKTIAFLLPALHTLLNAKDLDPSQVALLILAPTRELAQQIVDECEKLVSQC 198
Query: 400 NAK--CHACIGGTMSVKIFANW-RLVFMLLWVTPGRVYDLIN 516
N + CH +GG+ + + R +L TPGR+ D ++
Sbjct: 199 NPRFECHLAVGGSAKASSLSKFLRGKPTILVATPGRLDDYLS 240
>UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82;
Proteobacteria|Rep: ATP-dependent RNA helicase srmB -
Escherichia coli (strain K12)
Length = 444
Score = 46.4 bits (105), Expect = 5e-04
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = +2
Query: 110 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 247
V TF ++ L E LL + GF +P+AIQ AI P + GRDV+ A
Sbjct: 3 VTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSA 48
Score = 36.3 bits (80), Expect = 0.54
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +1
Query: 241 SSPVRTGKTATFSISILQQIDTSIRECXA----LILAPTRELAQQIQKVVIALGDHLNAK 408
S+P TGKTA + + LQ + R+ LIL PTRELA Q+ L H +
Sbjct: 47 SAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRILILTPTRELAMQVSDHARELAKHTHLD 106
Query: 409 CHACIGG 429
GG
Sbjct: 107 IATITGG 113
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 46.4 bits (105), Expect = 5e-04
Identities = 25/49 (51%), Positives = 28/49 (57%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEK 265
F D LK ELLR I GFE PS +Q I I G DVI QA+S + K
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGK 96
Score = 43.2 bits (97), Expect = 0.005
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +1
Query: 259 GKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTM 435
GKTA F +S LQQI+ S + AL+L TRELA QI + +L + K GG +
Sbjct: 95 GKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGG-V 153
Query: 436 SVKI 447
++KI
Sbjct: 154 NIKI 157
>UniRef50_Q2UST1 Cluster: ATP-dependent RNA helicase mss116,
mitochondrial precursor; n=4; Trichocomaceae|Rep:
ATP-dependent RNA helicase mss116, mitochondrial
precursor - Aspergillus oryzae
Length = 633
Score = 46.4 bits (105), Expect = 5e-04
Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Frame = +1
Query: 223 RTRCYRSSPVRTGKTATFSIS----ILQQIDTSIR-ECXALILAPTRELAQQIQKVVIAL 387
R+ C + TGKT F + +LQ R + LI+ PTRELAQQI K L
Sbjct: 130 RSDCLVQAKTGTGKTLAFLLPTLHCLLQGHSAPPRGQVAILIITPTRELAQQIAKSCDQL 189
Query: 388 GDHL--NAKCHACIGGTMSVKIFANW-RLVFMLLWVTPGRVYDLIN 516
L +CH +GGT A + + +L TPGR+ D ++
Sbjct: 190 TSQLARPLECHIAVGGTARASALARFMKGAPSILVATPGRLKDYLS 235
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 46.4 bits (105), Expect = 5e-04
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT- 432
TGKTA++ + +L I++S +IL P RELA QI + V + + +GGT
Sbjct: 156 TGKTASYIVPMLNMINSSELSIQGIILVPIRELALQISRNVKRMSEGTGVISAPVVGGTS 215
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLI 513
M I V +++ TPGR+ DL+
Sbjct: 216 MQDDIIRVSNGVHVMVG-TPGRIVDLV 241
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 46.0 bits (104), Expect = 7e-04
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGT 432
+GKTA FS+ IL +I+ ALIL PTRELA Q+ + LG L K A GG
Sbjct: 95 SGKTAAFSLPILNKINLDQPLLQALILCPTRELASQVVTEIRKLGRRLPGLKVLAMTGGQ 154
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLI 513
+ ++ TPGR+ D +
Sbjct: 155 SGREQADALENGVQIVVGTPGRLADFV 181
Score = 34.7 bits (76), Expect = 1.7
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
F + L ELL + GFE + IQQ +I + G+D+I QA++
Sbjct: 49 FSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKT 93
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 46.0 bits (104), Expect = 7e-04
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Frame = +1
Query: 241 SSPVRTGKTATFSISILQQID-----TSIRECXALILAPTRELAQQIQKVVIALGDHLNA 405
S+ TGKTA F++ ILQ++ ALIL PTRELA Q+ + A H+N
Sbjct: 44 SAQTGTGKTAAFALPILQKMHERPMTVQHSNARALILTPTRELAAQVADNISAYSKHMNI 103
Query: 406 KCHACIGGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
GG + ++ TPGR+ + I
Sbjct: 104 SVLTIYGGMKMATQAQKLKQGADIIVATPGRLLEHI 139
Score = 35.9 bits (79), Expect = 0.72
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
F+ + E+LR I G++ + +QQ+AI +G DV+A AQ+
Sbjct: 3 FESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQT 47
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 46.0 bits (104), Expect = 7e-04
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRE---CXALILAPTRELAQQIQKVVIALGDHLNAKCHACIG 426
TGKTA FS+ +LQ+I AL+L PTRELA Q+ + + G L G
Sbjct: 84 TGKTAAFSLPLLQRITPGAHAPFTASALVLVPTRELAMQVAEAIHRYGQKLGISVVPLYG 143
Query: 427 GTMSVKIFANWRLVFMLLWVTPGRVYD 507
G + + + ++ TPGR D
Sbjct: 144 GQVISQQLRVLKRGVDVVVATPGRALD 170
Score = 40.3 bits (90), Expect = 0.033
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Frame = +2
Query: 47 GSYDGPPG-MDPGTLDT---DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 214
G D PPG +D T + + TF+ + L L+ + A G+E+P+ IQ+ A+ P
Sbjct: 10 GRCDFPPGGIDGATSPSTVKETSAADNTFESLGLLPPLVEALSALGYEEPTPIQRAALPP 69
Query: 215 CIQGRDVIAQA 247
++G+D++ A
Sbjct: 70 LLEGKDLLGIA 80
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 46.0 bits (104), Expect = 7e-04
Identities = 28/91 (30%), Positives = 44/91 (48%)
Frame = +1
Query: 241 SSPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHAC 420
S+ TGKTA F++ IL ++ R L+L PTRELA Q+++ + +
Sbjct: 176 SAQTGTGKTAAFALPILHKLGAHERRLRCLVLEPTRELALQVEEAFQKYSKYTDLTATVV 235
Query: 421 IGGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
GG K + + ++ TPGR+ D I
Sbjct: 236 YGGVGYGKQREDLQRGVDVVAATPGRLLDHI 266
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 46.0 bits (104), Expect = 7e-04
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = +1
Query: 256 TGKTATFSISILQQID--TSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 429
TGKTA F I I+++++ + R ALIL PTRELA Q++ + L A GG
Sbjct: 52 TGKTAAFGIPIIERLEHGPNSRNPQALILTPTRELAVQVRDEIAKLTHGQRINVVAVYGG 111
Query: 430 TMSVKIFANWRLVFMLLWVTPGRVYDLI 513
+ ++ TPGRV DL+
Sbjct: 112 KPLRSQMEKLKRAPHIVVGTPGRVIDLM 139
Score = 32.3 bits (70), Expect = 8.8
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+ DM L E+ + A + +PS IQ I ++GRDV+ QA++
Sbjct: 6 YADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQART 50
>UniRef50_A5B2H1 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 46.0 bits (104), Expect = 7e-04
Identities = 19/51 (37%), Positives = 36/51 (70%)
Frame = +2
Query: 101 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
D+ +TF+++ L+ L+R + G EKP+ IQ+ AI ++G+DV+A+A++
Sbjct: 20 DEESKTFEELGLEPSLIRALIKKGIEKPTPIQEVAIPLILEGKDVVARAKT 70
>UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 727
Score = 46.0 bits (104), Expect = 7e-04
Identities = 21/61 (34%), Positives = 37/61 (60%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEKLLLSLYRFYN 295
+F D L ++ L G+ + KP+AIQ+ +I+P +QG+D++A A++ K L L +
Sbjct: 63 SFSDFPLSKKTLGGLKQGQYHKPTAIQRESILPALQGKDILAAAKTGSGKTLAFLIPVFE 122
Query: 296 K 298
K
Sbjct: 123 K 123
Score = 37.5 bits (83), Expect = 0.23
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTS----IRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
+GKT F I + +++ T+ + ALI+ PTRELA QI + V +G + I
Sbjct: 110 SGKTLAFLIPVFEKLYTNQWTKLDGLGALIITPTRELALQIFETVAKIGKLHDFTTGLII 169
Query: 424 GGTMSVKIFANWRLVFMLLWVTPGRV 501
GG ++K N ++ TPGR+
Sbjct: 170 GG-QNLKAEKNRLHQLNIIICTPGRL 194
>UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 402
Score = 46.0 bits (104), Expect = 7e-04
Identities = 33/96 (34%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIR-ECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 432
+GKT F I +L Q+ R E +ILAPTREL QI +V + LN GG
Sbjct: 49 SGKTGAFLIPLLHQLLEKDRPEKYGIILAPTRELVIQIAEVAQLMSAKLNITIVPIYGGV 108
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLINFVRALHAK 540
V+ A ++ TPGR+ LI + K
Sbjct: 109 DDVEQMAQLAKRPHIIVATPGRLAQLIRDAKGFDLK 144
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 46.0 bits (104), Expect = 7e-04
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGT 432
TGKTA F I +L+ ID+ A+IL PTRELA Q+ + + L +L GG
Sbjct: 52 TGKTAAFGIPLLENIDSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQ 111
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLIN 516
+ + ++ TPGRV D I+
Sbjct: 112 PIDRQIKALQKGVQIIIGTPGRVMDHID 139
Score = 36.7 bits (81), Expect = 0.41
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
F D+N+ E+ + + GFE+ S IQ AI + +DV QAQ+
Sbjct: 6 FKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQT 50
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 46.0 bits (104), Expect = 7e-04
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXA---LILAPTRELAQQIQKVVIALGDHLNAKCHACIG 426
TGKTA F++ +L+++ R+ L+L PTREL Q+ V L N +G
Sbjct: 266 TGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVG 325
Query: 427 GTMSVKIFANWRLVFMLLWVTPGRVYDLINFVRALH 534
G A R +L TPGR+ D ++ + H
Sbjct: 326 GLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFH 361
Score = 41.5 bits (93), Expect = 0.014
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +2
Query: 68 GMDPGTLDTDWDQVVE--TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIA 241
G + G D Q E +F DMNL LL+ I A GF++P+ IQ+ I + G+D+ A
Sbjct: 201 GQEAGGFFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICA 260
Query: 242 QA 247
A
Sbjct: 261 CA 262
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 45.6 bits (103), Expect = 9e-04
Identities = 29/88 (32%), Positives = 43/88 (48%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
S +GKTA F+I I Q +D + AL+L PTRELA Q+++ + +G K A
Sbjct: 48 SQTGSGKTAAFAIPICQLVDWDENKPQALVLVPTRELAIQVKEDMFNIGRFKRLKVAAVY 107
Query: 424 GGTMSVKIFANWRLVFMLLWVTPGRVYD 507
G + ++ TPGR+ D
Sbjct: 108 GKAPFYHQEKELKQKTHVVVGTPGRIID 135
Score = 40.3 bits (90), Expect = 0.033
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +2
Query: 107 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+ F D L +ELL+ I FE P+ +QQ+ I ++ +D+I ++Q+
Sbjct: 2 IKSNFSDYQLSDELLKSISMLNFESPTKVQQQVIPAILEHKDIIVKSQT 50
>UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2;
Gammaproteobacteria|Rep: ATP-dependent rna helicase Rhl
- Dichelobacter nodosus (strain VCS1703A)
Length = 432
Score = 45.6 bits (103), Expect = 9e-04
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTS-----IRECXALILAPTRELAQQIQKVVIALGDHLNAKCHAC 420
TGKTA F +S++ + T+ + A++LAPTRELA QI+K + LG + A
Sbjct: 57 TGKTAAFLLSLMHYLMTNPVHPKAKGPWAIVLAPTRELAIQIKKEMDLLGAYTGLVSLAI 116
Query: 421 IGGTM---SVKIFANWRLVFMLLWVTPGRVYDL 510
GGT K+F + ++ TPGR+ DL
Sbjct: 117 YGGTSIEHQKKLFQACNVDVII--GTPGRIIDL 147
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 45.6 bits (103), Expect = 9e-04
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQI 366
TGKTA FS+ +L +IDT+ + AL+L PTRELA Q+
Sbjct: 53 TGKTAAFSLPLLSRIDTTKNKPQALVLCPTRELAIQV 89
Score = 39.9 bits (89), Expect = 0.044
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
TF D+ L LL+ + + G+E P+ IQ +AI+ + G DV+ AQ+
Sbjct: 6 TFADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQT 51
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 45.6 bits (103), Expect = 9e-04
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQI 366
TGKTA F++ +L +ID ++ E L+LAPTRELA Q+
Sbjct: 72 TGKTAAFALPLLSRIDANVAEPQILVLAPTRELAIQV 108
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 45.6 bits (103), Expect = 9e-04
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +1
Query: 325 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTMSVKIFANWRLVFMLLWVTPGRVY 504
AL+LAPTRELAQQIQ+V I G + + + GG + + ++ TPGR+
Sbjct: 233 ALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLI 292
Query: 505 DLI 513
D +
Sbjct: 293 DFL 295
>UniRef50_Q16KK0 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 591
Score = 45.6 bits (103), Expect = 9e-04
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Frame = +1
Query: 217 HPRTRCYRSSPVRTGKTATFSISILQQIDTSIRECX--ALILAPTRELAQQIQKVVIALG 390
HP C +P +GKTA F I I+ + ++ C AL++ PTRELA+Q Q+ + L
Sbjct: 178 HPVHAC---APTGSGKTAAFLIPIIHHLQKPMK-CGFRALVVCPTRELAKQTQRESLRLC 233
Query: 391 DHLNAKCHACIGGTMSVKIFA-NWRLVFMLLWVTPGRVYDLIN 516
+ +N + H + + R + +L TP R+ L N
Sbjct: 234 EEINLRTHVITKVDENTTDYGLESRKHYDILVTTPNRICFLAN 276
>UniRef50_A6PWH4 Cluster: HLA-B associated transcript 1; n=6; Homo
sapiens|Rep: HLA-B associated transcript 1 - Homo
sapiens (Human)
Length = 197
Score = 45.6 bits (103), Expect = 9e-04
Identities = 24/49 (48%), Positives = 28/49 (57%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEK 265
F D LK ELLR I GFE PS +Q I I G DV+ QA+S + K
Sbjct: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGK 95
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 45.6 bits (103), Expect = 9e-04
Identities = 24/49 (48%), Positives = 28/49 (57%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEK 265
F D LK ELLR I GFE PS +Q I I G DV+ QA+S + K
Sbjct: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGK 95
Score = 38.3 bits (85), Expect = 0.13
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 259 GKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTM 435
GKTA F ++ LQQ++ + L++ TRELA QI K ++ N K GG +
Sbjct: 94 GKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGG-L 152
Query: 436 SVK 444
S+K
Sbjct: 153 SIK 155
>UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22;
Gammaproteobacteria|Rep: ATP-dependent RNA helicase rhlB
- Pseudomonas aeruginosa
Length = 397
Score = 45.6 bits (103), Expect = 9e-04
Identities = 35/92 (38%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Frame = +1
Query: 256 TGKTATFSISILQQI-------DTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCH 414
TGKTA F ISI+ Q+ + + E ALI+APTREL QI K AL +
Sbjct: 57 TGKTAAFLISIITQLLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVM 116
Query: 415 ACIGGTMSVKIFANWRLVFM-LLWVTPGRVYD 507
+GG K F +L TPGR+ D
Sbjct: 117 TFVGGMDFDKQLKQLEARFCDILVATPGRLLD 148
Score = 32.3 bits (70), Expect = 8.8
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEKLLLSLYRFYNK 298
F D NL L+ I+ GF + IQ + + ++G+D I +AQ+ K L +
Sbjct: 11 FHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAAFLISIITQ 70
Query: 299 SIQ 307
+Q
Sbjct: 71 LLQ 73
>UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;
n=6; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 41 - Arabidopsis thaliana (Mouse-ear cress)
Length = 505
Score = 45.6 bits (103), Expect = 9e-04
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Frame = +1
Query: 241 SSPVRTGKTATFSISILQQIDT--------SIRECXALILAPTRELAQQIQKVVIALGDH 396
S+ +GKTA+F + I+ + T R A++LAPTREL Q++ LG
Sbjct: 153 SADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKG 212
Query: 397 LNAKCHACIGG-TMSVKIFANWRLVFMLLWVTPGRVYDLIN 516
L K +GG MS +++ + V +++ TPGRV DL++
Sbjct: 213 LPFKTALVVGGDPMSGQLYRIQQGVELIIG-TPGRVVDLLS 252
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 45.6 bits (103), Expect = 9e-04
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Frame = +1
Query: 211 ALHPRTRCYRSSPVRTGKTATFSISILQQIDTSIRECXA---LILAPTRELAQQIQKVVI 381
AL R C S+ +GKTA F++ L+++ + A LIL PTRELA QI ++
Sbjct: 201 ALTGRDLC-ASAITGSGKTAAFALPTLERLLFRPKRVFATRVLILTPTRELAVQIHSMIQ 259
Query: 382 ALGDHLNAKCHACIGGTMSVKIFANWRLVFMLLWVTPGRVYD 507
L + KC +GG + R + ++ TPGR+ D
Sbjct: 260 NLAQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMID 301
Score = 38.7 bits (86), Expect = 0.10
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +2
Query: 113 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 247
+TF ++NL LLR G++KP+ IQ I + GRD+ A A
Sbjct: 167 DTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASA 211
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 45.2 bits (102), Expect = 0.001
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Frame = +1
Query: 256 TGKTATFSISILQQI-DTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 432
TGKTA +++ +LQQ+ + + ALIL+PTR+LA QI + G + +C GG
Sbjct: 61 TGKTAAYALPLLQQLTEGPPGQLRALILSPTRDLADQICVAMNHFGRQTHLRCATIYGG- 119
Query: 433 MSVKIFANWRLV---FMLLWVTPGRVYDLI 513
+ ++L+ ++ PGR+ DL+
Sbjct: 120 -KINYTRQYQLLTGGVDIIVACPGRLLDLL 148
Score = 39.1 bits (87), Expect = 0.077
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +2
Query: 104 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+++ F + N ++L GI G+ + IQ +AI +QGRDV+ AQ+
Sbjct: 10 ELLVNFTEFNFNTQILSGIQTQGYRTATPIQIKAIPAILQGRDVVGLAQT 59
>UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacillus cereus group|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 389
Score = 45.2 bits (102), Expect = 0.001
Identities = 26/90 (28%), Positives = 45/90 (50%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
SP TGKT + + +L +I+ +++ ++LAPTREL QI + V + I
Sbjct: 42 SPTGTGKTLAYLLPLLHKINPEVKQPQVVVLAPTRELVMQIHEEVQKFTAGTEISGASLI 101
Query: 424 GGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
GG + + ++ +PGR+ +LI
Sbjct: 102 GGADIKRQVEKLKKHPRVIVGSPGRILELI 131
>UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=20; Bacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 436
Score = 45.2 bits (102), Expect = 0.001
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIAL------GDHLNA 405
S +GKT + + L +I+ E +I APTRELAQQI + ++ L + A
Sbjct: 48 SQTGSGKTHAYLLPTLNRINPGREEVQLVITAPTRELAQQIYEEIVKLTKFCAEDQMITA 107
Query: 406 KCHACIGGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
+C IGGT + + ++ TPGR+ DL+
Sbjct: 108 RC--LIGGTDKQRSIEKLKKQPHIVVGTPGRIKDLV 141
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 45.2 bits (102), Expect = 0.001
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGG- 429
TGKTA F++ +L ++D +++ L+LAPTRELA Q+ + +L GG
Sbjct: 92 TGKTAAFALPLLDRLDLAVKNPQVLVLAPTRELAIQVAEAFQRYAKNLPGFHVLPVYGGQ 151
Query: 430 TMSVKIFANWRLVFMLLWVTPGRVYDLI 513
+M V++ R +++ TPGRV D I
Sbjct: 152 SMVVQLRQLARGAHVIVG-TPGRVMDHI 178
Score = 35.9 bits (79), Expect = 0.72
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 110 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+E+F ++L+ LL + G+E PS IQ I + G D++ +AQ+
Sbjct: 43 IESFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQT 90
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+F + L E L+R I A G+ +P+ +QQRAI +QGRD++ AQ+
Sbjct: 2 SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQT 47
Score = 34.3 bits (75), Expect = 2.2
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 11/96 (11%)
Frame = +1
Query: 256 TGKTATFSISILQQI------DTSIR----ECXALILAPTRELAQQIQKVVIALGDHLNA 405
TGKT F++ IL+++ D S R + L+L PTRELA Q+ LN
Sbjct: 49 TGKTGGFALPILERLFPGGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYARDLNF 108
Query: 406 KCHACIGGT-MSVKIFANWRLVFMLLWVTPGRVYDL 510
GG M+ ++ A + V +L+ PGR+ DL
Sbjct: 109 ISACIFGGVGMNPQVQAMAKGVDVLV-ACPGRLLDL 143
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 45.2 bits (102), Expect = 0.001
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGT 432
TGKTA F+I LQ + ++ LIL P REL +QI + I LG L N + GG
Sbjct: 53 TGKTAAFAIPALQHLRAEVQHPQVLILTPGRELCKQISQEFIKLGKGLENFRVAEVTGGG 112
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDL 510
+ + ++ TPGR+ D+
Sbjct: 113 KLSGVKKSLHGA-QVISATPGRLIDI 137
Score = 43.2 bits (97), Expect = 0.005
Identities = 16/45 (35%), Positives = 31/45 (68%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
F D+ LK+ +L IY G++KP+ IQ +++ +QG+D + +A++
Sbjct: 7 FQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAKT 51
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/41 (48%), Positives = 30/41 (73%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVV 378
TGKTA F + I+Q+I+ +++ ALIL PTRELA Q+ + +
Sbjct: 51 TGKTAAFGLPIVQKIEPGLKKPQALILCPTRELAIQVNEEI 91
Score = 32.7 bits (71), Expect = 6.7
Identities = 17/49 (34%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +2
Query: 110 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQS 253
++ F + L+ + + + A GF++PS IQ++AI + Q D+I QAQ+
Sbjct: 1 MDKFTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQT 49
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 45.2 bits (102), Expect = 0.001
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECX---ALILAPTRELAQQIQKVVIALGDHLNAKCHACIG 426
TGKT F + +L +I R AL+L+PTRELA QI + +L+ +G
Sbjct: 49 TGKTGGFLLPVLHKIAEGRRHGIRNRALVLSPTRELATQIHQAAKDYAKYLHTNAVLLVG 108
Query: 427 GTMSVKIFANWRLVFMLLWVTPGRVYD 507
G ++ N + + ++ TPGR+ D
Sbjct: 109 GVDFIRQERNLKRNWDIVVATPGRLLD 135
Score = 37.1 bits (82), Expect = 0.31
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
TF+ + L E+LR + G P+ IQ+++I I GRD++ AQ+
Sbjct: 2 TFEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQT 47
>UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09528 protein - Schistosoma
japonicum (Blood fluke)
Length = 454
Score = 45.2 bits (102), Expect = 0.001
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALG-DHLNAKCHACI--G 426
+GKTA F I ILQ + T ++ ALI+ PTRELA QI + L C+ + G
Sbjct: 49 SGKTAAFLIPILQSLMTELKPLYALIITPTRELAHQIGEQAAGLNLIQGEPLCNVLVITG 108
Query: 427 GTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
G + + ++ TPGR+ DL+
Sbjct: 109 GRSIIHQSIDLARSPHIIVSTPGRLADLL 137
>UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 606
Score = 45.2 bits (102), Expect = 0.001
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXAL----ILAPTRELAQQIQKVVIALGDHLNAK--CHA 417
TGKT F + ++Q++ ++ AL IL+PTRELAQQI +V + L+ K +
Sbjct: 115 TGKTLAFLVPVVQRLLSAPMPPSALTSILILSPTRELAQQINEVAERMSTALSKKFGTRS 174
Query: 418 CIGGTMSVKIFANWRLVFM-LLWVTPGRVYDLI 513
+GGT + N + +L TPGR+ DL+
Sbjct: 175 VVGGTNMDRDIKNLKSKRADILVATPGRLLDLM 207
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 45.2 bits (102), Expect = 0.001
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRE--CXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 429
+GKTA F I +L+++ + + ALIL+PTR+LA+Q K LG + + +GG
Sbjct: 76 SGKTAAFLIPMLEKLKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGG 135
Query: 430 TMSVKIFANWRLVFMLLWVTPGRVYDLINFV 522
F ++ TPGR+ L++ V
Sbjct: 136 DSMEDQFEELTKGPDVIIATPGRLMHLLSEV 166
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 45.2 bits (102), Expect = 0.001
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
+GKTA+F+I +++ ++ + A+IL PTRELA Q+ + +L + N K GG
Sbjct: 55 SGKTASFAIPLIELVNEN-NGIEAIILTPTRELAIQVADEIESLKGNKNLKIAKIYGGKA 113
Query: 436 ---SVKIFANWRLVFMLLWVTPGRVYDLIN 516
+K N +V TPGR+ D IN
Sbjct: 114 IYPQIKALKNANIVV----GTPGRILDHIN 139
Score = 34.3 bits (75), Expect = 2.2
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQS 253
F+++NL + +L I GFEKP+ IQ + I + +++AQA++
Sbjct: 8 FNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQART 53
>UniRef50_UPI0000E4A052 Cluster: PREDICTED: similar to DEAD/H box 51
RNA helicase, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to DEAD/H box 51 RNA
helicase, partial - Strongylocentrotus purpuratus
Length = 720
Score = 44.8 bits (101), Expect = 0.002
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 10/125 (8%)
Frame = +1
Query: 199 TRNNALHPRTRCYRSSPVRTGKTATFSISILQQI-DTSIRECXALILAPTRELAQQIQKV 375
T + PR C S+P +GKT ++I I+Q + + + AL++ PTR+LA Q+ K+
Sbjct: 307 TGHAGYRPRDLCI-SAPTGSGKTLAYAIPIIQALMNRVVCRVRALVVLPTRDLATQVYKI 365
Query: 376 VIALGDHLNAKCHACIGGTMSV---------KIFANWRLVFMLLWVTPGRVYDLINFVRA 528
+ AL K IGGT +I + ++ TPGR+ D I+
Sbjct: 366 ISALCKATPLK-PVLIGGTKKFAQEQSLLVREIDGELHSLADIVVATPGRLVDNISQTAG 424
Query: 529 LHAKH 543
+ +H
Sbjct: 425 FNLQH 429
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 668,890,480
Number of Sequences: 1657284
Number of extensions: 14278066
Number of successful extensions: 41366
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 39284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41248
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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