Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0467.Seq
(593 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 5e-23
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 5e-23
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 70 1e-12
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 59 2e-09
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 59 2e-09
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 54 1e-07
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 49 3e-06
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 49 3e-06
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 46 2e-05
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 43 2e-04
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 42 3e-04
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 41 9e-04
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 38 0.005
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 38 0.005
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 38 0.008
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.019
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.025
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 33 0.23
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 32 0.30
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 31 0.53
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 31 0.70
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_33720| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 29 2.1
SB_34297| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_9532| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_15811| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_56248| Best HMM Match : RVT_1 (HMM E-Value=8.6e-20) 28 6.5
SB_44173| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_30467| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_21533| Best HMM Match : TPD52 (HMM E-Value=5e-08) 28 6.5
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 104 bits (250), Expect = 5e-23
Identities = 54/93 (58%), Positives = 69/93 (74%), Gaps = 6/93 (6%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRE------CXALILAPTRELAQQIQKVVIALGDHLNAKCHA 417
TGKTATF+ISILQ+IDT+ ++ C AL+LAPTRELAQQIQKVV+ALGD+++ KCHA
Sbjct: 133 TGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVVLALGDYMHVKCHA 192
Query: 418 CIGGTMSVKIFANWRLVFMLLWVTPGRVYDLIN 516
CIGGT + ++ TPGRV+D+IN
Sbjct: 193 CIGGTNVREDRMKLEEGVHVVVGTPGRVFDMIN 225
Score = 86.2 bits (204), Expect = 2e-17
Identities = 38/48 (79%), Positives = 42/48 (87%)
Frame = +2
Query: 80 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ 223
G ++WD+VVE+FDDMNLKE LLRGIYAYGFEKPSAIQQRAI PC Q
Sbjct: 52 GKRQSNWDEVVESFDDMNLKEALLRGIYAYGFEKPSAIQQRAIRPCCQ 99
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 104 bits (250), Expect = 5e-23
Identities = 51/86 (59%), Positives = 65/86 (75%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKTATFSIS+LQ IDT +RE AL+L+PTRELA QIQKVV+ALGD+++ +CHACIGGT
Sbjct: 45 TGKTATFSISVLQAIDTQLREPQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTN 104
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLI 513
+ ++ TPGRV+D+I
Sbjct: 105 IGEDIRKLDYGQHIVSGTPGRVFDMI 130
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +2
Query: 170 GFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
GFEKPSAIQQRAI P ++GRDVIAQAQS
Sbjct: 16 GFEKPSAIQQRAIKPILKGRDVIAQAQS 43
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 70.1 bits (164), Expect = 1e-12
Identities = 34/65 (52%), Positives = 46/65 (70%)
Frame = +1
Query: 310 IRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTMSVKIFANWRLVFMLLWVT 489
+RE AL+L+PTRELA QIQKVV+ALGD+++ +CHACIGGT + ++ T
Sbjct: 1 LREPQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGT 60
Query: 490 PGRVY 504
PGRV+
Sbjct: 61 PGRVF 65
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKTA + + +L++ DT+ AL+L PTRELA Q ++ I LG H+ A+ GGT
Sbjct: 95 TGKTAAYLVPLLERTDTTKNCIQALVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTS 154
Query: 436 ----SVKIFANWRLVFMLLWV---TPGRVYDLI 513
++++ V +++ V TPGRV DL+
Sbjct: 155 LKDDILRLYNKDIFVHVVVHVIVATPGRVLDLM 187
Score = 50.8 bits (116), Expect = 8e-07
Identities = 22/45 (48%), Positives = 33/45 (73%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
F+D LK ELL GI+ GF+KPS IQ+ +I + GRD++A+A++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKN 93
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKTA + + +L++ DT+ AL+L PTRELA Q ++ I LG H+ A+ GGT
Sbjct: 95 TGKTAAYLVPLLERTDTTKNCIQALVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTS 154
Query: 436 ----SVKIFANWRLVFMLLWV---TPGRVYDLI 513
++++ V +++ V TPGRV DL+
Sbjct: 155 LKDDILRLYNKDIFVHVVVHVIVATPGRVLDLM 187
Score = 50.8 bits (116), Expect = 8e-07
Identities = 22/45 (48%), Positives = 33/45 (73%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
F+D LK ELL GI+ GF+KPS IQ+ +I + GRD++A+A++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKN 93
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 53.6 bits (123), Expect = 1e-07
Identities = 31/84 (36%), Positives = 44/84 (52%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
+GKT F++ ILQ + + + ALIL PTRELA QI + ALG + KC +GG
Sbjct: 12 SGKTGAFALPILQALLDNPQRLFALILTPTRELAFQISEQCEALGSGIGVKCAVIVGGID 71
Query: 436 SVKIFANWRLVFMLLWVTPGRVYD 507
+ ++ TPGR+ D
Sbjct: 72 MMSQALMLAKKPHIIIATPGRLID 95
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 48.8 bits (111), Expect = 3e-06
Identities = 34/106 (32%), Positives = 50/106 (47%)
Frame = +1
Query: 232 CYRSSPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKC 411
C + +GKTA F++ ILQ++ A++L PTRELA QI LG + K
Sbjct: 47 CIGCAKTGSGKTAAFALPILQKLCDDPYGIFAVVLTPTRELAFQIADQFKVLGRPIGLKE 106
Query: 412 HACIGGTMSVKIFANWRLVFMLLWVTPGRVYDLINFVRALHAKHHQ 549
+GG +K + ++ TPGR+ D I L+ K Q
Sbjct: 107 AVIVGGLDMMKQALSLANKPHVVIATPGRLADHIKSTDTLNLKKIQ 152
Score = 33.9 bits (74), Expect = 0.099
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+F + L + L+ A G +KP+ IQ + P +QGRD I A++
Sbjct: 8 SFAGLGLNKWLVSQCVAMGIKKPTEIQLNCVPPILQGRDCIGCAKT 53
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 48.8 bits (111), Expect = 3e-06
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGT 432
TGKT FS+ L+ + T +IL PTRE+A Q++ V+ A+G H + C IGG
Sbjct: 61 TGKTCVFSVIALENVITESNCIQIIILTPTREIAVQVKDVICAIGCHYDGLACKVFIGG- 119
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLI 513
+S++ + TPGRV LI
Sbjct: 120 ISLEEDKKALKSCHIAVGTPGRVKYLI 146
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/45 (51%), Positives = 28/45 (62%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
F + L LLRG+ GFEKPS IQ +AI G D+IAQA+S
Sbjct: 15 FHSLLLSPTLLRGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKS 59
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/49 (48%), Positives = 28/49 (57%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEK 265
F D LK ELLR I GFE PS +Q I I G D+I QA+S + K
Sbjct: 49 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGK 97
Score = 37.5 bits (83), Expect = 0.008
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = +1
Query: 259 GKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTM 435
GKTA F ++ LQQ++ + L++ TRELA QI K ++ N K GG
Sbjct: 96 GKTAVFVLATLQQLEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGIN 155
Query: 436 SVKIFANWRLVFMLLWV-TPGRVYDLINFVRALHAKHHQTF 555
K + + V TPGR+ L + L+ KH + F
Sbjct: 156 IKKDQQTLKTNCPHIVVGTPGRILALTR-EKTLNLKHAKHF 195
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/49 (48%), Positives = 28/49 (57%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEK 265
F D LK ELLR I GFE PS +Q I I G D+I QA+S + K
Sbjct: 49 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGK 97
Score = 37.5 bits (83), Expect = 0.008
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = +1
Query: 259 GKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTM 435
GKTA F ++ LQQ++ + L++ TRELA QI K ++ N K GG
Sbjct: 96 GKTAVFVLATLQQLEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGIN 155
Query: 436 SVKIFANWRLVFMLLWV-TPGRVYDLINFVRALHAKHHQTF 555
K + + V TPGR+ L + L+ KH + F
Sbjct: 156 IKKDQQTLKTNCPHIVVGTPGRILALTR-EKTLNLKHAKHF 195
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 44.4 bits (100), Expect = 7e-05
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECX--ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 429
+GKTA F I + +++ T + ALIL+PTRELA Q QK + LG K +GG
Sbjct: 329 SGKTAAFLIPMFEKLQTHTAKVGIRALILSPTRELALQTQKFIKELGRFTGLKSSVILGG 388
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Frame = +1
Query: 256 TGKTATFSISIL-----QQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHAC 420
+GKTA + + +L Q ++ R AL +APTRELA+QI DH K C
Sbjct: 527 SGKTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPIKVCVC 586
Query: 421 IGGTMSVKIFANWRLVFMLLWVTPGRVYDLIN 516
GG + L TPGR+ D ++
Sbjct: 587 YGGVSVPYQASQLERGCHFLVGTPGRLQDFVS 618
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +1
Query: 328 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTMSVKIFANWRLVFMLLWVTPGRVYD 507
L+L PTRELAQQ+Q+V ++G H + GG + TPGR+ D
Sbjct: 136 LVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPKGPQIRELERGVEICIATPGRLID 195
Query: 508 LI 513
++
Sbjct: 196 ML 197
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +1
Query: 220 PRTRCYRSSPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDH 396
P S TGKTA F +++L ++D + + L+PT ELA+Q KV A+G H
Sbjct: 141 PPVNMIAQSQSGTGKTAAFVLTMLSRVDATKPYPQVICLSPTYELARQTGKVAEAMGKH 199
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +2
Query: 113 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDV--IAQAQS 253
++F+++ L L RG+Y GF KPS IQ+ A+ + V IAQ+QS
Sbjct: 103 KSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVNMIAQSQS 151
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/66 (34%), Positives = 39/66 (59%)
Frame = +1
Query: 325 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTMSVKIFANWRLVFMLLWVTPGRVY 504
ALI+APTRELA Q++ ++ + + K A +GG + K + ++ TPGR++
Sbjct: 221 ALIMAPTRELALQVKDHLVKAAKYTSVKVAAIVGGMAAPKQQRLLKQRPEIVVATPGRLW 280
Query: 505 DLINFV 522
+LI+ V
Sbjct: 281 ELISQV 286
Score = 31.1 bits (67), Expect = 0.70
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPC-IQGRDVIAQAQSELEKLL 271
++ + + ++LR + GF KP+ IQ +I P + RD+I A++ K L
Sbjct: 132 WEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTL 183
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 40.7 bits (91), Expect = 9e-04
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 9/67 (13%)
Frame = +1
Query: 256 TGKTATFSISILQQI---------DTSIRECXALILAPTRELAQQIQKVVIALGDHLNAK 408
+GKTA F+I +L I + + + ALILAPTRELAQQI++ ++ G L +
Sbjct: 149 SGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFGRPLGIR 208
Query: 409 CHACIGG 429
+ IGG
Sbjct: 209 TVSVIGG 215
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +1
Query: 313 RECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTMSVKIFANWRLVFMLLWVTP 492
R+ A+++ PTRELA QI + N +C GGT + A + ++ TP
Sbjct: 143 RDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYGGTGISEQIAELKRGAEIIVCTP 202
Query: 493 GRVYDLI 513
GR+ D++
Sbjct: 203 GRMIDML 209
Score = 34.7 bits (76), Expect = 0.057
Identities = 17/59 (28%), Positives = 34/59 (57%)
Frame = +2
Query: 110 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEKLLLSLYR 286
V+T+ ++ ++L + +EKP+ IQ +AI + GRD+IA + +L + ++R
Sbjct: 104 VKTWAQTGVQLKILDVLKKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHR 162
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +2
Query: 110 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEKLLLSL 280
VE F D + + L G+ GF P+ IQ++ I + GRDV+ A++ K L L
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFL 105
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Frame = +1
Query: 256 TGKTATFSISILQ----QIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
+GKT F I I++ Q TS+ AL+++PTRELA Q +V++ +G+ + I
Sbjct: 98 SGKTLAFLIPIIETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKHDLSAGLII 157
Query: 424 GG 429
GG
Sbjct: 158 GG 159
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +2
Query: 95 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEKLL 271
D + +E+F D+NL EL + F+ P+ IQ +++ + GRD+I A++ K L
Sbjct: 66 DCPKPIESFHDLNLPPELSTYLAKKNFQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTL 124
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +2
Query: 110 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+ +F++ NL E L + ++KP+ +Q+ +I I GRDV+A AQ+
Sbjct: 710 INSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQT 757
Score = 30.7 bits (66), Expect = 0.93
Identities = 28/95 (29%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Frame = +1
Query: 256 TGKTATFSISILQQI------DTSIRECX---ALILAPTRELAQQIQKVVIALGDHLNAK 408
+GKTA F + ++ + +S E A+ +APTRELA QI +
Sbjct: 759 SGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKFAHGTMLR 818
Query: 409 CHACIGGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
C GG + LL TPGR+ D I
Sbjct: 819 PVVCYGGVSVSHQLRQLQSGCNLLVGTPGRLTDFI 853
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +2
Query: 110 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+ +F++ NL E L + ++KP+ +Q+ +I I GRDV+A AQ+
Sbjct: 133 INSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQT 180
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 36.3 bits (80), Expect = 0.019
Identities = 19/46 (41%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQS 253
F+D++L E LL + G++KP+ +Q+ AI P ++G RD++A AQ+
Sbjct: 877 FEDVDLGEILLHNVGLAGYKKPTPVQKYAI-PIVKGKRDLMACAQT 921
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 35.9 bits (79), Expect = 0.025
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 397 LNAKCHACIGGTMSVKIFANWRLVFMLLWVTPGRVYDLIN 516
++ KCHACIGGT + ++ TPGRV+D+IN
Sbjct: 1 MHVKCHACIGGTNVREDRMKLEEGVHVVVGTPGRVFDMIN 40
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 33.5 bits (73), Expect = 0.13
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +1
Query: 256 TGKTATFS----ISILQQIDTSIRECX-ALILAPTRELAQQIQKVVIALGDHLNAKCHAC 420
+GKTA F + I+ Q + + + LI APTREL QQI G N A
Sbjct: 565 SGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAV 624
Query: 421 IGGTMSVKIFANWRLVFMLLWVTPGRVYD 507
GG + + ++ TPGR+ D
Sbjct: 625 FGGGNKYEQSKALQEGAEIVVATPGRLID 653
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 32.7 bits (71), Expect = 0.23
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Frame = +1
Query: 256 TGKTATFSISILQQI-DTSI-----RECXALILAPTRELAQQIQKVVIALGDHLNAKCHA 417
TGKT +F++ +++++ D + R L++APTRELA+Q+ L +L
Sbjct: 121 TGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQVGNEFENLKSNLEV---Y 177
Query: 418 CIGGTMSVKIFAN-WRLVFMLLWVTPGRVYDLI 513
CI G M + N +L TPGR+ D +
Sbjct: 178 CIYGGMPYEPQENAINSGLDVLVGTPGRILDFM 210
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 32.3 bits (70), Expect = 0.30
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +1
Query: 325 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTMSVKIF-ANWRLVFMLLWVTPGRV 501
A++++PTRELAQQI + L + H S F A F +L TP R+
Sbjct: 208 AVVVSPTRELAQQIYREFCHLAKGCAFRIHVLTKANASTNTFGAKSSKRFDILVTTPNRL 267
Query: 502 YDLI 513
L+
Sbjct: 268 VHLL 271
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 31.5 bits (68), Expect = 0.53
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEKLLLS 277
F + E L + + +G+ P+ IQ + + + GRDV+ A + KLL S
Sbjct: 198 FFHCSFNESLSKNLSNHGYHSPTPIQMQVLPVLLSGRDVMVCASTGSGKLLPS 250
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 31.1 bits (67), Expect = 0.70
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +1
Query: 256 TGKTATFSISILQQI---DTSIRECXALILAPTRELAQQ 363
TGKTA F + IL+++ T L++ PTRELA Q
Sbjct: 58 TGKTAAFMLPILERLLYRPTQSPAIRVLVITPTRELAIQ 96
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 30.7 bits (66), Expect = 0.93
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Frame = +1
Query: 256 TGKTATFSISILQ---QIDTSIRE-CXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
+GKT F + +++ ++ R +I++PTREL+ Q V L H N +
Sbjct: 620 SGKTLAFLVPVVELLYKLQFKTRNGTGVIIISPTRELSLQTYGVARDLLKHHNFTYGIIM 679
Query: 424 GGTMSVKIFANWRLVFMLLWVTPGRVYD 507
GG + LL TPGR+ D
Sbjct: 680 GGVNRKAEAERLQKGVNLLIATPGRLLD 707
>SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPC-IQGRDVIAQAQS 253
++ + + ++LR + GF KP+ IQ +I P + RD+I A++
Sbjct: 74 WEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAET 119
>SB_33720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = +2
Query: 59 GPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSA 190
GPPG GT D VVE DD K E G GF + A
Sbjct: 45 GPPGSGKGTQLVSDDLVVELIDDNLTKPECQNGWLLDGFPRTVA 88
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/57 (35%), Positives = 25/57 (43%)
Frame = +1
Query: 325 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTMSVKIFANWRLVFMLLWVTPG 495
A I+ P RELA QI K +L H + IGG + + LL TPG
Sbjct: 458 ACIVVPARELATQILKTAKSLCHHARFRSVGLIGGRKQKWMRDDLESPVDLLVATPG 514
>SB_34297| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 512
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +1
Query: 295 QIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTMSVKIFANWRLVFM 474
Q D++++E IL ELA++IQK++ LN K AC+ V F N +
Sbjct: 58 QGDSTLKEPVQKILIIGLELAKEIQKLIDEASSGLNIKHAACL--PSEVPAFCNTERFGL 115
Query: 475 LL 480
LL
Sbjct: 116 LL 117
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 29 GPSKDQG-SYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRG 157
GP +QG S GPPG PG T W+ + N E LRG
Sbjct: 3363 GPKGEQGRSISGPPG-PPGAPGTSWNDSIVNGGLSNSLLESLRG 3405
>SB_9532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1339
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +1
Query: 139 RRIVERHIRLWF*KTFCNPATRNNALHPRTRCYRSSPVRTGKTATFSISIL 291
+RI R RL+ KT N T N HP CY + T K A+++IS+L
Sbjct: 1079 KRIKARLARLFNGKTDLNFKTFNKNKHPSAVCY----LNTIKPASWAISLL 1125
>SB_15811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -3
Query: 411 AFSIQVITKSYHHLLNLLGQLSCGSQDQSXTFTNACID 298
A ++Q +TK+Y HL+N+ G +++ T C D
Sbjct: 201 AHALQTLTKAYRHLMNVTGN---RDKEEKANATEQCAD 235
>SB_56248| Best HMM Match : RVT_1 (HMM E-Value=8.6e-20)
Length = 1193
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = -1
Query: 560 NQKV*WCLA*SARTKFIKSYTRPGVTHKSMNTNLQLANIFTDIVPPMQAWHLAFK*SPRA 381
N K+ CL K I+ P +T + + T L +A +FT + WH+
Sbjct: 414 NGKLRICLDPRDLNKAIQREHYPLLTIEDVATRLHVAKVFTKLDAKNGFWHIELDEDSSY 473
Query: 380 ITTF 369
+TTF
Sbjct: 474 LTTF 477
>SB_44173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 14 EDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEE 145
+D N + D G+ D D GT+D D D V+ DD N +
Sbjct: 71 DDDGNIDNDDDGNIDND---DDGTIDNDDDGYVDNVDDDNFDND 111
>SB_30467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 134
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 14 EDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEE 145
+D N + D G+ D D GT+D D D V+ DD N +
Sbjct: 54 DDDGNIDNDDDGNIDND---DDGTIDNDDDGYVDNVDDDNFDND 94
>SB_21533| Best HMM Match : TPD52 (HMM E-Value=5e-08)
Length = 829
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -2
Query: 166 GVYASQQFFFEVHVIEGFDNLIPVGVKC 83
GVY F H + GF N IP +C
Sbjct: 742 GVYLESNVFQNGHALVGFQNTIPASQEC 769
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,737,536
Number of Sequences: 59808
Number of extensions: 468521
Number of successful extensions: 1966
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1957
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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