Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0467.Seq
(593 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 106 1e-23
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 106 1e-23
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 96 1e-20
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 96 1e-20
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 69 3e-12
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 59 3e-09
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 59 3e-09
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 57 8e-09
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 53 1e-07
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 50 1e-06
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 50 1e-06
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 48 5e-06
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 44 6e-05
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 44 6e-05
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 44 6e-05
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 43 1e-04
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 40 0.002
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 40 0.002
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 40 0.002
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 39 0.003
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 38 0.007
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 37 0.012
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 36 0.016
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 36 0.016
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 36 0.016
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 36 0.016
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 36 0.022
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 36 0.029
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 36 0.029
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 34 0.066
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 34 0.066
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 34 0.066
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 34 0.066
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 33 0.12
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 33 0.12
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 33 0.12
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 33 0.15
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 31 0.47
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 31 0.47
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 30 1.1
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 29 2.5
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 29 2.5
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 29 2.5
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 28 4.4
AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical ... 28 4.4
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z81047-5|CAB02832.3| 390|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z48544-1|CAA88435.1| 473|Caenorhabditis elegans Hypothetical pr... 27 7.6
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 106 bits (255), Expect = 1e-23
Identities = 52/86 (60%), Positives = 65/86 (75%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKTATFSIS+LQ +DT +RE ALIL+PTRELA QIQKVV+ALGD++N +CHACIGGT
Sbjct: 74 TGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTN 133
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLI 513
+ ++ TPGRV+D+I
Sbjct: 134 LGEDIRKLDYGQHVVSGTPGRVFDMI 159
Score = 78.2 bits (184), Expect = 4e-15
Identities = 36/49 (73%), Positives = 42/49 (85%)
Frame = +2
Query: 107 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
V+ TFD M L+E+LLRGIYAYGFEKPSAIQQRA+ ++ RDVIAQAQS
Sbjct: 24 VIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQS 72
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 106 bits (255), Expect = 1e-23
Identities = 52/86 (60%), Positives = 65/86 (75%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKTATFSIS+LQ +DT +RE ALIL+PTRELA QIQKVV+ALGD++N +CHACIGGT
Sbjct: 74 TGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTN 133
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLI 513
+ ++ TPGRV+D+I
Sbjct: 134 LGEDIRKLDYGQHVVSGTPGRVFDMI 159
Score = 78.2 bits (184), Expect = 4e-15
Identities = 36/49 (73%), Positives = 42/49 (85%)
Frame = +2
Query: 107 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
++ TFD M L+E+LLRGIYAYGFEKPSAIQQRAI ++ RDVIAQAQS
Sbjct: 24 IIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQS 72
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 96.3 bits (229), Expect = 1e-20
Identities = 43/58 (74%), Positives = 52/58 (89%)
Frame = +2
Query: 80 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC G+DVIAQAQS
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQS 75
Score = 86.6 bits (205), Expect = 1e-17
Identities = 47/87 (54%), Positives = 57/87 (65%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKTATFS+SILQ+ID AL++APTRELAQQIQKV+ ALG++LN CIGGT
Sbjct: 77 TGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTS 136
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLIN 516
++ TPGRV D+IN
Sbjct: 137 VRDDQRKLEAGIHVVVGTPGRVGDMIN 163
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 96.3 bits (229), Expect = 1e-20
Identities = 43/58 (74%), Positives = 52/58 (89%)
Frame = +2
Query: 80 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC G+DVIAQAQS
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQS 75
Score = 86.6 bits (205), Expect = 1e-17
Identities = 47/87 (54%), Positives = 57/87 (65%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKTATFS+SILQ+ID AL++APTRELAQQIQKV+ ALG++LN CIGGT
Sbjct: 77 TGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTS 136
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLIN 516
++ TPGRV D+IN
Sbjct: 137 VRDDQRKLEAGIHVVVGTPGRVGDMIN 163
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 68.5 bits (160), Expect = 3e-12
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = +2
Query: 128 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEKLLLSL 280
M LKEELLRGIY +GFEKPSAIQ+ A+ PC G+DV Q+Q+ K ++SL
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISL 51
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
S +GKT I ILQ ID ++LAP R +AQ+ + + +LG +LN C+
Sbjct: 40 SQAGSGKTVISLIDILQGIDCEDAHLQVILLAPQRGMAQRAHEQLKSLGRNLNVNA-TCL 98
Query: 424 G 426
G
Sbjct: 99 G 99
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 58.8 bits (136), Expect = 3e-09
Identities = 35/86 (40%), Positives = 45/86 (52%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKT F+I ILQ++ ALIL PTRELA QI + ALG + KC +GG
Sbjct: 137 TGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRS 196
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLI 513
+ ++ TPGR+ DLI
Sbjct: 197 LIHQARELSERPHVVVATPGRLADLI 222
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 58.8 bits (136), Expect = 3e-09
Identities = 35/86 (40%), Positives = 45/86 (52%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKT F+I ILQ++ ALIL PTRELA QI + ALG + KC +GG
Sbjct: 137 TGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRS 196
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLI 513
+ ++ TPGR+ DLI
Sbjct: 197 LIHQARELSERPHVVVATPGRLADLI 222
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 57.2 bits (132), Expect = 8e-09
Identities = 27/86 (31%), Positives = 45/86 (52%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKT + I ++++I +++ A+++ PTRELA Q ++ + L H+ K GGT
Sbjct: 91 TGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTD 150
Query: 436 SVKIFANWRLVFMLLWVTPGRVYDLI 513
L+ TPGR+ DL+
Sbjct: 151 LRDDIMRLNGTVHLVIATPGRILDLM 176
Score = 44.0 bits (99), Expect = 8e-05
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
F+D L +LL GI+ G+EKPS IQ+ +I + G+D++A+A++
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKN 89
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 53.2 bits (122), Expect = 1e-07
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSI---RECXALILAPTRELAQQIQKVVIALGDHLNAKCH 414
SP +GKT F + +++ I + + ALIL+P+REL QI V+ + LN
Sbjct: 53 SPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKLNLTVE 112
Query: 415 ACIGG---TMSVKIFANWRLVFMLLWVTPGRVYDLINFVRALHAKHHQTFWFLM 567
GG ++K+F N + +L TPGR++ +I + L A+ +T L+
Sbjct: 113 TVTGGQKVDKNIKMFKNKNV--NILVATPGRLFQIIQHEKTLIARKMRTLQLLV 164
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 50.0 bits (114), Expect = 1e-06
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDT-SIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 432
+GKTA F I +LQ++ AL+++PTRELA Q KVV LG +C +GG
Sbjct: 72 SGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGD 131
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLI 513
+ F+ +L TPGR+ +I
Sbjct: 132 QIEEQFSTIHENPDILLATPGRLLHVI 158
Score = 31.5 bits (68), Expect = 0.47
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQS 253
+ + L + + I GF +P+ IQ++ I PCI G+DV+A +++
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTI-PCIMDGKDVVAMSRT 70
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 50.0 bits (114), Expect = 1e-06
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDT-SIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 432
+GKTA F I +LQ++ AL+++PTRELA Q KVV LG +C +GG
Sbjct: 72 SGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGD 131
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLI 513
+ F+ +L TPGR+ +I
Sbjct: 132 QIEEQFSTIHENPDILLATPGRLLHVI 158
Score = 31.5 bits (68), Expect = 0.47
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQS 253
+ + L + + I GF +P+ IQ++ I PCI G+DV+A +++
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTI-PCIMDGKDVVAMSRT 70
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 48.8 bits (111), Expect = 3e-06
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Frame = +1
Query: 214 LHPRTRCYRSSPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGD 393
+ P + + TGKTA F +++L +ID ++ + LAPT ELA+QI +VV +G
Sbjct: 245 MEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGK 304
Query: 394 HL-NAKCHACI-GGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
+ N K H I GG M+ +L ++ TPG D +
Sbjct: 305 FIDNLKIHYAIKGGNMAA--MRGRKLTEQIVIGTPGITRDYL 344
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 48.8 bits (111), Expect = 3e-06
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Frame = +1
Query: 214 LHPRTRCYRSSPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGD 393
+ P + + TGKTA F +++L +ID ++ + LAPT ELA+QI +VV +G
Sbjct: 270 MEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGK 329
Query: 394 HL-NAKCHACI-GGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
+ N K H I GG M+ +L ++ TPG D +
Sbjct: 330 FIDNLKIHYAIKGGNMAA--MRGRKLTEQIVIGTPGITRDYL 369
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 48.8 bits (111), Expect = 3e-06
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Frame = +1
Query: 214 LHPRTRCYRSSPVRTGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGD 393
+ P + + TGKTA F +++L +ID ++ + LAPT ELA+QI +VV +G
Sbjct: 654 MEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGK 713
Query: 394 HL-NAKCHACI-GGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
+ N K H I GG M+ +L ++ TPG D +
Sbjct: 714 FIDNLKIHYAIKGGNMAA--MRGRKLTEQIVIGTPGITRDYL 753
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 48.0 bits (109), Expect = 5e-06
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT- 432
+GKT F+I +LQ + + L+L PTRELA QI + ALG + +GG
Sbjct: 92 SGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVD 151
Query: 433 MSVKIFANWRLVFMLLWVTPGRVYDLINFVRALHAK 540
M+ + A R +++ TPGR+ D + + + K
Sbjct: 152 MAAQAMALARRPHIIV-ATPGRLVDHLENTKGFNLK 186
Score = 37.1 bits (82), Expect = 0.009
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +2
Query: 89 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
D + D ++F ++ + + L G+ KPS IQQ A+ +QG+DVI A++
Sbjct: 36 DDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAET 90
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 44.4 bits (100), Expect = 6e-05
Identities = 23/49 (46%), Positives = 28/49 (57%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEK 265
F D LK E+LR I GFE PS +Q I I G DV+ QA+S + K
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGK 91
Score = 36.7 bits (81), Expect = 0.012
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +1
Query: 259 GKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTMS 438
GKTA F I+ LQQ++ E + + TRELA QI K +L A G M+
Sbjct: 90 GKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMA 149
Query: 439 VK 444
+K
Sbjct: 150 IK 151
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 44.4 bits (100), Expect = 6e-05
Identities = 23/49 (46%), Positives = 28/49 (57%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEK 265
F D LK E+LR I GFE PS +Q I I G DV+ QA+S + K
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGK 91
Score = 36.7 bits (81), Expect = 0.012
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +1
Query: 259 GKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTMS 438
GKTA F I+ LQQ++ E + + TRELA QI K +L A G M+
Sbjct: 90 GKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMA 149
Query: 439 VK 444
+K
Sbjct: 150 IK 151
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 44.4 bits (100), Expect = 6e-05
Identities = 23/49 (46%), Positives = 28/49 (57%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEK 265
F D LK E+LR I GFE PS +Q I I G DV+ QA+S + K
Sbjct: 42 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGK 90
Score = 36.7 bits (81), Expect = 0.012
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +1
Query: 259 GKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTMS 438
GKTA F I+ LQQ++ E + + TRELA QI K +L A G M+
Sbjct: 89 GKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMA 148
Query: 439 VK 444
+K
Sbjct: 149 IK 150
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 43.2 bits (97), Expect = 1e-04
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +1
Query: 325 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTMSVKIFANWRLVFMLLWVTPGRVY 504
A+I+APTRELAQQI++ G L K + IGG R+ ++ TPGR+
Sbjct: 381 AIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLL 440
Query: 505 DLI 513
D++
Sbjct: 441 DVL 443
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKT FS+ ++ +D+ +I+ PTRE++ QI++ V + A+ +GG+
Sbjct: 70 TGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGSA 128
Query: 436 -SVKIFANWRLVFMLLWVTPGRVYDLINFVRALHAKHHQTF 555
+ + + ++ TPGR+ L+ + A++ H F
Sbjct: 129 HKLNLIDLKQTRPQIVIGTPGRIAQLVK-LGAMNMSHVDFF 168
Score = 37.1 bits (82), Expect = 0.009
Identities = 18/53 (33%), Positives = 32/53 (60%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEKLLL 274
TF+ + + ++ L + F++PS +Q RAI + GRD++ QA+S K L+
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLV 75
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTM 435
TGKT FS+ ++ +D+ +I+ PTRE++ QI++ V + A+ +GG+
Sbjct: 70 TGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGSA 128
Query: 436 -SVKIFANWRLVFMLLWVTPGRVYDLINFVRALHAKHHQTF 555
+ + + ++ TPGR+ L+ + A++ H F
Sbjct: 129 HKLNLIDLKQTRPQIVIGTPGRIAQLVK-LGAMNMSHVDFF 168
Score = 37.1 bits (82), Expect = 0.009
Identities = 18/53 (33%), Positives = 32/53 (60%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEKLLL 274
TF+ + + ++ L + F++PS +Q RAI + GRD++ QA+S K L+
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLV 75
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 39.5 bits (88), Expect = 0.002
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIR--ECX-ALILAPTRELAQQIQKVVIALGDHLNAKCHACIG 426
TGKTA F + IL+++ + C L+L PTRELA Q+ +V L + + C G
Sbjct: 196 TGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAG 255
Query: 427 GTMSVKIFANWRLVFMLLWVTPGRVYDLINFVRALHAKHHQTFW 558
G A R ++ TPGR+ D ++ + + + + F+
Sbjct: 256 GLDLKAQEAALRSGPDVVVATPGRLIDHLHNSPSFNLSNIEVFF 299
Score = 37.9 bits (84), Expect = 0.005
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +2
Query: 14 EDSKNGPSK-DQGSYDGPPGMDPG-TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPS 187
E K+G SK Q + D + G +LDT V +F+ MNL ++L+ G+ P+
Sbjct: 116 EKRKSGKSKKSQENEDFFSALIDGKSLDTS---VNVSFEQMNLSRQILKACSGAGYSDPT 172
Query: 188 AIQQRAIMPCIQGRDVIAQA 247
IQQ I + G+D+ A A
Sbjct: 173 PIQQACIPVALTGKDICACA 192
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 38.7 bits (86), Expect = 0.003
Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECXA-----LILAPTRELAQQIQKVVIALGDHLNAKCHAC 420
+GKT F + L I L+L PTRELAQQ+Q+V I L K
Sbjct: 177 SGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCL 236
Query: 421 IGGTMSVKIFANWRLVFMLLWVTPGRVYDLIN 516
GG + ++ TPGR+ D ++
Sbjct: 237 FGGASKGPQARDLERGVDIVVATPGRLLDFLD 268
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 37.5 bits (83), Expect = 0.007
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +1
Query: 325 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTMSVKIFANWRLVFMLLWVTPGRV 501
ALI++PTRELA Q + A+G H C IGG+ V N ++ TPGR+
Sbjct: 151 ALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGS-DVAFERNRISGINIIVCTPGRL 208
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 119 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEKLL 271
F+D L L G+ + KP+ IQ+ I + G DV+ A++ K L
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTL 128
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 36.7 bits (81), Expect = 0.012
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +2
Query: 95 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSELEKLL 271
D Q + F D++L E + I G+++P+ +Q+ +I P +Q GRD+++ AQ+ K
Sbjct: 160 DVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSI-PALQGGRDLMSCAQTGSGKTA 218
Query: 272 LSLYRFYNKSIQ 307
L N +Q
Sbjct: 219 AFLVPLVNAILQ 230
Score = 27.5 bits (58), Expect = 7.6
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 325 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTMSVK-IFANWRLVFMLLWVTPGRV 501
AL+L+PTREL+ QI GG + K RL +L TPGR+
Sbjct: 253 ALVLSPTRELSLQIFNESRKFAYRTPITSALLYGGRENYKDQIHKLRLGCHILIATPGRL 312
Query: 502 YDLIN 516
D+++
Sbjct: 313 IDVMD 317
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 36.3 bits (80), Expect = 0.016
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Frame = +1
Query: 256 TGKTATFSISILQQI--DTSIRECX---ALILAPTRELAQQIQKVVIALGDHLNAKCHAC 420
+GKT F + + + I + E A+ILAPTRELA Q K L K
Sbjct: 352 SGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACT 411
Query: 421 IGGTMSVKIFANWRLVFMLLWVTPGRVYDLI 513
GG + A+ + ++ TPGR+ D++
Sbjct: 412 YGGVGISEQIADLKRGAEIVVCTPGRMIDVL 442
Score = 32.7 bits (71), Expect = 0.20
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = +2
Query: 95 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEKLLL 274
D + ++T+ + +++ + + + KP++IQ +AI + GRDVI A++ K L
Sbjct: 298 DCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLA 357
Query: 275 SL 280
L
Sbjct: 358 FL 359
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 36.3 bits (80), Expect = 0.016
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 325 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTMSVKIFAN-WRLVFMLLWVTPGRV 501
AL+L+PTRELA QI K N + GG + + N R +L TPGR+
Sbjct: 225 ALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRL 284
Query: 502 YDLI 513
D+I
Sbjct: 285 IDII 288
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/48 (22%), Positives = 27/48 (56%)
Frame = +2
Query: 110 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+
Sbjct: 138 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQT 185
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 36.3 bits (80), Expect = 0.016
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 325 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTMSVKIFAN-WRLVFMLLWVTPGRV 501
AL+L+PTRELA QI K N + GG + + N R +L TPGR+
Sbjct: 209 ALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRL 268
Query: 502 YDLI 513
D+I
Sbjct: 269 IDII 272
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/48 (22%), Positives = 27/48 (56%)
Frame = +2
Query: 110 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+
Sbjct: 122 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQT 169
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 36.3 bits (80), Expect = 0.016
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 325 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTMSVKIFAN-WRLVFMLLWVTPGRV 501
AL+L+PTRELA QI K N + GG + + N R +L TPGR+
Sbjct: 206 ALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRL 265
Query: 502 YDLI 513
D+I
Sbjct: 266 IDII 269
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/48 (22%), Positives = 27/48 (56%)
Frame = +2
Query: 110 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+
Sbjct: 119 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQT 166
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 35.9 bits (79), Expect = 0.022
Identities = 15/59 (25%), Positives = 34/59 (57%)
Frame = +2
Query: 77 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
P + D++ +TF D L E +L+ I G+EK + +Q+ I ++ ++++ +A++
Sbjct: 77 PQVDEMDFEPEHKTFADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRART 135
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 7/55 (12%)
Frame = +1
Query: 256 TGKTATFSISILQQI-------DTSIRECXALILAPTRELAQQIQKVVIALGDHL 399
+GKT F I ++Q++ D S+ A+I+APT+EL QI K+ + L L
Sbjct: 137 SGKTGAFLIPLVQKLIAESKTNDGSVGPS-AVIIAPTKELITQIYKLFVKLSQAL 190
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 35.5 bits (78), Expect = 0.029
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +1
Query: 304 TSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTMSVK---IFANWRLVFM 474
T +R ALI+APTREL QI K + AL + +GG VK I + R +
Sbjct: 64 TEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDIV 123
Query: 475 LLWVTPGRVYDLI 513
+ TPGR++ ++
Sbjct: 124 V--ATPGRLWAMM 134
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 35.5 bits (78), Expect = 0.029
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +1
Query: 304 TSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTMSVK---IFANWRLVFM 474
T +R ALI+APTREL QI K + AL + +GG VK I + R +
Sbjct: 231 TEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDIV 290
Query: 475 LLWVTPGRVYDLI 513
+ TPGR++ ++
Sbjct: 291 V--ATPGRLWAMM 301
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 34.3 bits (75), Expect = 0.066
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +2
Query: 113 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+TF + NL E + + + G+ K + IQQ A+ QG D++A AQ+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQT 387
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 34.3 bits (75), Expect = 0.066
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +2
Query: 113 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+TF + NL E + + + G+ K + IQQ A+ QG D++A AQ+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQT 387
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 34.3 bits (75), Expect = 0.066
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 13/108 (12%)
Frame = +1
Query: 232 CYRSSPVRTGKTATFSISILQQIDTSIRECX-----------ALILAPTRELAQQIQKVV 378
C S +GKT F + L ID + + L+L+PTRELAQQI+ V
Sbjct: 124 CIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEV 183
Query: 379 IALGDHLNAKCHACI--GGTMSVKIFANWRLVFMLLWVTPGRVYDLIN 516
N C+ GG+ ++ A R ++ TPGR+ DL N
Sbjct: 184 KKYS--YNGYKSVCLYGGGSRPEQVEA-CRGGVEIVIATPGRLTDLSN 228
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 170 GFEKPSAIQQRAIMPCIQGRDVIAQAQSELEKLLLSL 280
GFEKPS IQ + + G+D I +Q+ K L L
Sbjct: 103 GFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFL 139
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 34.3 bits (75), Expect = 0.066
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +2
Query: 113 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+TF + NL E + + + G+ K + IQQ A+ QG D++A AQ+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQT 387
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 113 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+TF + NL E + + + G+ K + IQQ + QG D++A AQ+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQT 598
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 113 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+TF + NL E + + + G+ K + IQQ + QG D++A AQ+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQT 598
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 113 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+TF + NL E + + + G+ K + IQQ + QG D++A AQ+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQT 598
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 33.1 bits (72), Expect = 0.15
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Frame = +1
Query: 328 LILAPTRELAQQIQKVVIALGDHL------NAKCHACIGGTMSVKIFANWRLVFMLLWVT 489
LI+ P+RELA+QI ++I + D L + CIGG + + R ++ T
Sbjct: 270 LIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVAT 329
Query: 490 PGRVYDLI 513
PGR+ D++
Sbjct: 330 PGRLSDML 337
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 31.5 bits (68), Expect = 0.47
Identities = 13/50 (26%), Positives = 28/50 (56%)
Frame = +2
Query: 104 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
Q ++F D ++ + + R + G+ + + IQQ + G+D++A AQ+
Sbjct: 295 QPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQT 344
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 31.5 bits (68), Expect = 0.47
Identities = 13/50 (26%), Positives = 28/50 (56%)
Frame = +2
Query: 104 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
Q ++F D ++ + + R + G+ + + IQQ + G+D++A AQ+
Sbjct: 295 QPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQT 344
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 30.3 bits (65), Expect = 1.1
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 10/50 (20%)
Frame = +1
Query: 259 GKTATFSISILQQI---DTSIRECX-------ALILAPTRELAQQIQKVV 378
GKTA F + I+ +I D R ALILAPTRELA QI + +
Sbjct: 430 GKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEAL 479
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 29.1 bits (62), Expect = 2.5
Identities = 22/65 (33%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Frame = +1
Query: 328 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTMSVKIFANWRLVFML--LWVTPGRV 501
LI+APTREL Q L KC GG + R L L T GR+
Sbjct: 818 LIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRL 877
Query: 502 YDLIN 516
D +N
Sbjct: 878 QDFVN 882
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 29.1 bits (62), Expect = 2.5
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Frame = +1
Query: 241 SSPVRTGKTATF---SISILQQIDTSIRE-CXALILAPTRELAQQIQKVVIALGDHLNAK 408
S+ +GKT F +I +L +++ +I++PTREL+ Q V+ L + N
Sbjct: 111 SAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSELLEGSNLT 170
Query: 409 CHACIGGTMSVKIFANWRLVFMLLWVTPGRVYD 507
+GG+ +L TPGR+ D
Sbjct: 171 YGLVMGGSNRSAEKDKLAKGVSILVATPGRLLD 203
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 29.1 bits (62), Expect = 2.5
Identities = 22/65 (33%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Frame = +1
Query: 328 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTMSVKIFANWRLVFML--LWVTPGRV 501
LI+APTREL Q L KC GG + R L L T GR+
Sbjct: 818 LIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRL 877
Query: 502 YDLIN 516
D +N
Sbjct: 878 QDFVN 882
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 116 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+F + + L+ I +E+P+ IQ AI + GRDV+ A++
Sbjct: 266 SFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKT 311
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 10/57 (17%)
Frame = +1
Query: 223 RTRCYRSSPVRTGKTATFSISILQQI----------DTSIRECXALILAPTRELAQQ 363
R S+P +GKT F++ ++ +I ++ + A++L PTRELA Q
Sbjct: 163 RRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +2
Query: 107 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSELEKLL 271
++ F D ++ LL + +PS IQ ++I + R+V+A A + K L
Sbjct: 124 IILRFSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTL 178
>AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical
protein Y48G1C.5 protein.
Length = 1161
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 585 NISIKLHQEPKSLMVFGMKRTNEVYQIIYTTWSD 484
+IS L + + L+ FG KRT EV YT W +
Sbjct: 999 SISKPLLKTRQLLLTFGKKRTQEVTHYQYTGWPE 1032
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 304 TSIRECXALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTMSVKIFAN 456
T++R+C + T EL +++ + L D +C+ +GGT+ +K F N
Sbjct: 5 TTVRQCRVTRIGST-ELPPRVENAIQFLDD----QCYEKLGGTVVMKWFGN 50
>Z81047-5|CAB02832.3| 390|Caenorhabditis elegans Hypothetical
protein C41G6.7 protein.
Length = 390
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = -1
Query: 365 ICWASSLVGARIKAXHSRMLVSICCRIDIEKVAVFPVLTGLER*HRVL 222
I W + +K+ H R ++ + +DI+ ++ P +ER +RVL
Sbjct: 185 IAWFPDVTRCVVKSRHLRYVLIMSTDVDIDAYSITPNQNFVERIYRVL 232
>Z48544-1|CAA88435.1| 473|Caenorhabditis elegans Hypothetical
protein ZK945.1 protein.
Length = 473
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 343 WEPGSKLXIHECLYRFVVESI*RK 272
WEPG+K H Y ++V+ I R+
Sbjct: 210 WEPGTKSGYHAITYGWIVDQIVRR 233
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,230,753
Number of Sequences: 27780
Number of extensions: 339000
Number of successful extensions: 1101
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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