Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0466.Seq
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   1.7  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   3.0  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   4.0  
AY748839-1|AAV28187.1|  169|Anopheles gambiae cytochrome P450 pr...    23   7.0  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   9.2  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   9.2  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -2

Query: 526 KMGPGITRTFFGHGMPADRGCPGENGHLKGLP 431
           K G G+       GMP D+G  GE+G + G+P
Sbjct: 446 KGGQGVPGRPGPEGMPGDKGDKGESGSV-GMP 476



 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -2

Query: 487 GMPADRGCPGENGHLKGLPRCPNNQRFQVNH 395
           GM  D+G PGE G + G P  P        H
Sbjct: 697 GMKGDKGRPGEAG-IDGAPGAPGKDGLPGRH 726



 Score = 24.6 bits (51), Expect = 3.0
 Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
 Frame = -2

Query: 487 GMPADRGCPGENGHL--KGLPRCP 422
           G   DRG  GE GH   KGLP  P
Sbjct: 323 GQAGDRGQVGERGHKGEKGLPGQP 346


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +3

Query: 450 PFSPG--HPRSAGIPCPKKVRVIPGPIL-YENFKKKKPPSNRG 569
           P  PG  +P+  G+P P + ++ PG +   +   + +PPS +G
Sbjct: 211 PPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQG 253


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 462 GHPRSAGIPCPKKVRVIPGP 521
           G P + G+P P+  R +PGP
Sbjct: 606 GRPGNDGLPGPQGQRGLPGP 625



 Score = 23.4 bits (48), Expect = 7.0
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -2

Query: 487 GMPADRGCPGENGHLKGLP 431
           GM  DRG PG  G + GLP
Sbjct: 660 GMKGDRGMPGLEG-VAGLP 677



 Score = 23.0 bits (47), Expect = 9.2
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -2

Query: 487 GMPADRGCPGENGHLKGLPRCP 422
           G+P   G PGE G L G P  P
Sbjct: 131 GLPGSLGYPGEKGDL-GTPGPP 151


>AY748839-1|AAV28187.1|  169|Anopheles gambiae cytochrome P450
           protein.
          Length = 169

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +3

Query: 435 KPLRWPFSPGHPRSAGIPCPKKVRVIPGPILYENFKKKKPP 557
           K L  PF  G    AG    + +  +    L +NF  ++PP
Sbjct: 129 KDLSVPFGAGKRLCAGETFARNIMFLTLAALMQNFNIRQPP 169


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -3

Query: 474  IGDVQGKMATLKVYQGALITK-GFRLII 394
            IGD QG+   + V     +TK G R++I
Sbjct: 2098 IGDPQGRQTAVLVESDGFVTKNGHRVVI 2125


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -2

Query: 82  HYVIRCYF 59
           HYVIRCY+
Sbjct: 101 HYVIRCYY 108


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,323
Number of Sequences: 2352
Number of extensions: 16471
Number of successful extensions: 33
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)