Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0466.Seq
         (698 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collag...    29   8.0  
M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type I...    29   8.0  
J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV pro-co...    29   8.0  
AY047568-1|AAK77300.1|  490|Drosophila melanogaster GH07929p pro...    29   8.0  
AL035632-6|CAB53644.1|  423|Drosophila melanogaster EG:BACN32G11...    29   8.0  
AE014298-211|AAF45629.1|  490|Drosophila melanogaster CG14789-PA...    29   8.0  
AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,...    29   8.0  
AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,...    29   8.0  
AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,...    29   8.0  

>M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collagen
           protein.
          Length = 1775

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -2

Query: 517 PGITRTFFGHGMPADRGCPGENGH 446
           PGI       G P +RG PGE GH
Sbjct: 587 PGIPGKDGARGPPGERGYPGERGH 610


>M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type IV
           collagen protein.
          Length = 1775

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -2

Query: 517 PGITRTFFGHGMPADRGCPGENGH 446
           PGI       G P +RG PGE GH
Sbjct: 587 PGIPGKDGARGPPGERGYPGERGH 610


>J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV
           pro-collagen protein.
          Length = 1775

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -2

Query: 517 PGITRTFFGHGMPADRGCPGENGH 446
           PGI       G P +RG PGE GH
Sbjct: 587 PGIPGKDGARGPPGERGYPGERGH 610


>AY047568-1|AAK77300.1|  490|Drosophila melanogaster GH07929p
           protein.
          Length = 490

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 443 KVAIFPWTSPIGWHSMPKKGSGNSWAHF 526
           ++ + PW     WHS   + SG  W+HF
Sbjct: 111 RLVLPPWPRLYHWHSQGLQQSGLPWSHF 138


>AL035632-6|CAB53644.1|  423|Drosophila melanogaster EG:BACN32G11.6
           protein.
          Length = 423

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 443 KVAIFPWTSPIGWHSMPKKGSGNSWAHF 526
           ++ + PW     WHS   + SG  W+HF
Sbjct: 44  RLVLPPWPRLYHWHSQGLQQSGLPWSHF 71


>AE014298-211|AAF45629.1|  490|Drosophila melanogaster CG14789-PA
           protein.
          Length = 490

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 443 KVAIFPWTSPIGWHSMPKKGSGNSWAHF 526
           ++ + PW     WHS   + SG  W+HF
Sbjct: 111 RLVLPPWPRLYHWHSQGLQQSGLPWSHF 138


>AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,
           isoform C protein.
          Length = 1779

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -2

Query: 517 PGITRTFFGHGMPADRGCPGENGH 446
           PGI       G P +RG PGE GH
Sbjct: 587 PGIPGKDGARGPPGERGYPGERGH 610


>AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,
           isoform B protein.
          Length = 1779

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -2

Query: 517 PGITRTFFGHGMPADRGCPGENGH 446
           PGI       G P +RG PGE GH
Sbjct: 587 PGIPGKDGARGPPGERGYPGERGH 610


>AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,
           isoform A protein.
          Length = 1779

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -2

Query: 517 PGITRTFFGHGMPADRGCPGENGH 446
           PGI       G P +RG PGE GH
Sbjct: 587 PGIPGKDGARGPPGERGYPGERGH 610


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,716,942
Number of Sequences: 53049
Number of extensions: 664069
Number of successful extensions: 1831
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1831
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)