BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= tesV0465.Seq (612 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC9G1.08c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 26 3.7 SPAPB1A11.04c |||transcription factor |Schizosaccharomyces pombe... 25 6.5 SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa... 25 6.5 SPAC821.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 8.6 SPCC622.11 |||LMBR1-like membrane protein|Schizosaccharomyces po... 25 8.6 SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 25 8.6 >SPAC9G1.08c |||phospholipase |Schizosaccharomyces pombe|chr 1|||Manual Length = 241 Score = 26.2 bits (55), Expect = 3.7 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -3 Query: 526 LNKMLP*NTILELQYSDLALNNFISIGHSLKPSHKS 419 LN +LP N E+ ++N + + H L SHKS Sbjct: 4 LNSVLPSNACAEIIEGKDKVHNVVILMHGLGDSHKS 39 >SPAPB1A11.04c |||transcription factor |Schizosaccharomyces pombe|chr 1|||Manual Length = 697 Score = 25.4 bits (53), Expect = 6.5 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = -3 Query: 325 IYTGLFLHLVVRFCISR*SDFHNTNSILVSVVHPIT*DIS 206 I T +H++++FC+ + ++S LV V H I D S Sbjct: 510 ILTAATIHMLLKFCVVNIDQNYISSSRLVHVDHQILQDRS 549 >SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosaccharomyces pombe|chr 2|||Manual Length = 518 Score = 25.4 bits (53), Expect = 6.5 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +3 Query: 501 VF*GNILLSTFLGMGPMMFSE 563 +F NI TFLGM MMF + Sbjct: 227 IFNANIRYRTFLGMAVMMFQQ 247 >SPAC821.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 485 Score = 25.0 bits (52), Expect = 8.6 Identities = 10/30 (33%), Positives = 15/30 (50%) Frame = +2 Query: 38 ALPPRTTRIHNPPTTPIRPNNSTLTAMAVG 127 A P T H P TTP+R ++ + +G Sbjct: 282 AEPVETQHNHMPKTTPLRGTSTVMNGSPIG 311 >SPCC622.11 |||LMBR1-like membrane protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 562 Score = 25.0 bits (52), Expect = 8.6 Identities = 16/44 (36%), Positives = 25/44 (56%) Frame = +1 Query: 409 VLLLTYDWALKNVLY**NYLEPDQNIVIPELYFRVTFY*VPFLV 540 +LLL AL +++ Y+EP I IP ++ + Y VPF+V Sbjct: 61 LLLLLLIPALFTLIWIYKYIEPHSLISIPGIFVFLGLY-VPFVV 103 >SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1016 Score = 25.0 bits (52), Expect = 8.6 Identities = 12/40 (30%), Positives = 17/40 (42%) Frame = +2 Query: 23 SPHTAALPPRTTRIHNPPTTPIRPNNSTLTAMAVGDLFDC 142 SP+T TT PTT P +T +A + + C Sbjct: 928 SPNTVTTTKATTTFTPTPTTTTTPTPTTTSATSTNVIAQC 967 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,028,229 Number of Sequences: 5004 Number of extensions: 36438 Number of successful extensions: 110 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 107 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 110 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 267622334 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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