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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0465.Seq
         (612 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC9G1.08c |||phospholipase |Schizosaccharomyces pombe|chr 1|||...    26   3.7  
SPAPB1A11.04c |||transcription factor |Schizosaccharomyces pombe...    25   6.5  
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa...    25   6.5  
SPAC821.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1||...    25   8.6  
SPCC622.11 |||LMBR1-like membrane protein|Schizosaccharomyces po...    25   8.6  
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc...    25   8.6  

>SPAC9G1.08c |||phospholipase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 241

 Score = 26.2 bits (55), Expect = 3.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 526 LNKMLP*NTILELQYSDLALNNFISIGHSLKPSHKS 419
           LN +LP N   E+      ++N + + H L  SHKS
Sbjct: 4   LNSVLPSNACAEIIEGKDKVHNVVILMHGLGDSHKS 39


>SPAPB1A11.04c |||transcription factor |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 697

 Score = 25.4 bits (53), Expect = 6.5
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -3

Query: 325 IYTGLFLHLVVRFCISR*SDFHNTNSILVSVVHPIT*DIS 206
           I T   +H++++FC+      + ++S LV V H I  D S
Sbjct: 510 ILTAATIHMLLKFCVVNIDQNYISSSRLVHVDHQILQDRS 549


>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
           Ght7|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 518

 Score = 25.4 bits (53), Expect = 6.5
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 501 VF*GNILLSTFLGMGPMMFSE 563
           +F  NI   TFLGM  MMF +
Sbjct: 227 IFNANIRYRTFLGMAVMMFQQ 247


>SPAC821.03c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 485

 Score = 25.0 bits (52), Expect = 8.6
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 38  ALPPRTTRIHNPPTTPIRPNNSTLTAMAVG 127
           A P  T   H P TTP+R  ++ +    +G
Sbjct: 282 AEPVETQHNHMPKTTPLRGTSTVMNGSPIG 311


>SPCC622.11 |||LMBR1-like membrane protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 562

 Score = 25.0 bits (52), Expect = 8.6
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +1

Query: 409 VLLLTYDWALKNVLY**NYLEPDQNIVIPELYFRVTFY*VPFLV 540
           +LLL    AL  +++   Y+EP   I IP ++  +  Y VPF+V
Sbjct: 61  LLLLLLIPALFTLIWIYKYIEPHSLISIPGIFVFLGLY-VPFVV 103


>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1016

 Score = 25.0 bits (52), Expect = 8.6
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = +2

Query: 23   SPHTAALPPRTTRIHNPPTTPIRPNNSTLTAMAVGDLFDC 142
            SP+T      TT     PTT   P  +T +A +   +  C
Sbjct: 928  SPNTVTTTKATTTFTPTPTTTTTPTPTTTSATSTNVIAQC 967


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,028,229
Number of Sequences: 5004
Number of extensions: 36438
Number of successful extensions: 110
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 110
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 267622334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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