Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0465.Seq
(612 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 31 4.2
M74027-1|AAA59875.1| 573|Homo sapiens mucin protein. 31 4.2
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 31 4.2
Z68907-1|CAA93143.1| 393|Homo sapiens NAD (H)-specific isocitra... 30 7.4
Z68129-1|CAA92214.1| 393|Homo sapiens NAD(H)-specific isocitrat... 30 7.4
U69268-1|AAB70115.1| 296|Homo sapiens NAD (H)-specific isocitra... 30 7.4
U40272-1|AAD09357.1| 393|Homo sapiens NAD+-specific isocitrate ... 30 7.4
BC001902-1|AAH01902.1| 393|Homo sapiens isocitrate dehydrogenas... 30 7.4
BC000933-1|AAH00933.1| 393|Homo sapiens isocitrate dehydrogenas... 30 7.4
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 30.7 bits (66), Expect = 4.2
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +2
Query: 5 PVTEQQSPHTAAL-PPRTTRIHNPPTTPIRPNNSTLT 112
P T P T PP TT P TTPI P ST T
Sbjct: 894 PTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTT 930
Score = 30.7 bits (66), Expect = 4.2
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +2
Query: 5 PVTEQQSPHTAAL-PPRTTRIHNPPTTPIRPNNSTLT 112
P T P T PP TT P TTPI P ST T
Sbjct: 973 PTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTT 1009
Score = 29.9 bits (64), Expect = 7.4
Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +2
Query: 2 TPVTEQQSPHTAAL--PPRTTRIHNPPTTPIRPNNSTLT 112
+P T SP T PP TT P TTPI P ST T
Sbjct: 853 SPPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTTT 891
>M74027-1|AAA59875.1| 573|Homo sapiens mucin protein.
Length = 573
Score = 30.7 bits (66), Expect = 4.2
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +2
Query: 5 PVTEQQSPHTAAL-PPRTTRIHNPPTTPIRPNNSTLT 112
P T P T PP TT P TTPI P ST T
Sbjct: 177 PTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTT 213
Score = 30.7 bits (66), Expect = 4.2
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +2
Query: 5 PVTEQQSPHTAAL-PPRTTRIHNPPTTPIRPNNSTLT 112
P T P T PP TT P TTPI P ST T
Sbjct: 256 PTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTT 292
Score = 30.3 bits (65), Expect = 5.6
Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +2
Query: 2 TPVTEQQSPHTAAL--PPRTTRIHNPPTTPIRPNNSTLT 112
+P T SP T PP TT P TTPI P ST T
Sbjct: 136 SPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTT 174
Score = 29.9 bits (64), Expect = 7.4
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +2
Query: 5 PVTEQQSPHTAALPPRTTRIHNPP-TTPIRPNNSTLTAMA 121
P T P T PP TT PP TTP P + +T A
Sbjct: 131 PTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPA 170
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 30.7 bits (66), Expect = 4.2
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +2
Query: 5 PVTEQQSPHTAAL-PPRTTRIHNPPTTPIRPNNSTLT 112
P T P T PP TT P TTPI P ST T
Sbjct: 1519 PTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTT 1555
Score = 30.7 bits (66), Expect = 4.2
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +2
Query: 5 PVTEQQSPHTAAL-PPRTTRIHNPPTTPIRPNNSTLT 112
P T P T PP TT P TTPI P ST T
Sbjct: 1598 PTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTT 1634
Score = 29.9 bits (64), Expect = 7.4
Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +2
Query: 2 TPVTEQQSPHTAAL--PPRTTRIHNPPTTPIRPNNSTLT 112
+P T SP T PP TT P TTPI P ST T
Sbjct: 1478 SPPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTTT 1516
>Z68907-1|CAA93143.1| 393|Homo sapiens NAD (H)-specific isocitrate
dehydrogenase gamma subunit precursor protein.
Length = 393
Score = 29.9 bits (64), Expect = 7.4
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = -3
Query: 505 NTILELQYSDLALNNFISIGHSLKPSHKSVIKPNVLSSS 389
N I+ ++ + +AL I H+L PSHKS + N+L +S
Sbjct: 102 NAIMAIRRNRVALKGNIETNHNLPPSHKS--RNNILRTS 138
>Z68129-1|CAA92214.1| 393|Homo sapiens NAD(H)-specific isocitrate
dehydrogenase gamma-subunit precursor protein.
Length = 393
Score = 29.9 bits (64), Expect = 7.4
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = -3
Query: 505 NTILELQYSDLALNNFISIGHSLKPSHKSVIKPNVLSSS 389
N I+ ++ + +AL I H+L PSHKS + N+L +S
Sbjct: 102 NAIMAIRRNRVALKGNIETNHNLPPSHKS--RNNILRTS 138
>U69268-1|AAB70115.1| 296|Homo sapiens NAD (H)-specific isocitrate
dehydrogenase gamma subunit protein.
Length = 296
Score = 29.9 bits (64), Expect = 7.4
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = -3
Query: 505 NTILELQYSDLALNNFISIGHSLKPSHKSVIKPNVLSSS 389
N I+ ++ + +AL I H+L PSHKS + N+L +S
Sbjct: 18 NAIMAIRRNRVALKGNIETNHNLPPSHKS--RNNILRTS 54
>U40272-1|AAD09357.1| 393|Homo sapiens NAD+-specific isocitrate
dehydrogenase gamma subunit precursor protein.
Length = 393
Score = 29.9 bits (64), Expect = 7.4
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = -3
Query: 505 NTILELQYSDLALNNFISIGHSLKPSHKSVIKPNVLSSS 389
N I+ ++ + +AL I H+L PSHKS + N+L +S
Sbjct: 102 NAIMAIRRNRVALKGNIETNHNLPPSHKS--RNNILRTS 138
>BC001902-1|AAH01902.1| 393|Homo sapiens isocitrate dehydrogenase 3
(NAD+) gamma protein.
Length = 393
Score = 29.9 bits (64), Expect = 7.4
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = -3
Query: 505 NTILELQYSDLALNNFISIGHSLKPSHKSVIKPNVLSSS 389
N I+ ++ + +AL I H+L PSHKS + N+L +S
Sbjct: 102 NAIMAIRRNRVALKGNIETNHNLPPSHKS--RNNILRTS 138
>BC000933-1|AAH00933.1| 393|Homo sapiens isocitrate dehydrogenase 3
(NAD+) gamma protein.
Length = 393
Score = 29.9 bits (64), Expect = 7.4
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = -3
Query: 505 NTILELQYSDLALNNFISIGHSLKPSHKSVIKPNVLSSS 389
N I+ ++ + +AL I H+L PSHKS + N+L +S
Sbjct: 102 NAIMAIRRNRVALKGNIETNHNLPPSHKS--RNNILRTS 138
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,910,544
Number of Sequences: 237096
Number of extensions: 1191758
Number of successful extensions: 2790
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2759
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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