Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0462.Seq
         (797 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    29   0.17 
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    29   0.17 
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    26   1.6  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    26   1.6  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           25   2.0  
AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    25   3.6  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   8.3  

>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 29.1 bits (62), Expect = 0.17
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +3

Query: 258 LATKCGHVFCATCLKTTLERQSDCPKC 338
           + TKC H FC  C     ++ S C  C
Sbjct: 258 IVTKCKHYFCERCALAQYKKSSRCAIC 284


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 29.1 bits (62), Expect = 0.17
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +3

Query: 258 LATKCGHVFCATCLKTTLERQSDCPKC 338
           + TKC H FC  C     ++ S C  C
Sbjct: 258 IVTKCKHYFCERCALAQYKKSSRCAIC 284


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 553 GYPGMQGVEGELNELMEKG 609
           G PG+QG+ G+  E+ E+G
Sbjct: 783 GAPGIQGIRGDKGEMGEQG 801



 Score = 24.6 bits (51), Expect = 3.6
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 550 PGYPGMQGVEGELNELMEKGGQN*RSTRGIRNY 648
           PG PG +G+ G+  +  E G       +G R Y
Sbjct: 452 PGRPGPEGMPGDKGDKGESGSVGMPGPQGPRGY 484



 Score = 24.2 bits (50), Expect = 4.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 547 YPGYPGMQGVEGE 585
           YPG PG +G+ GE
Sbjct: 484 YPGQPGPEGLRGE 496



 Score = 24.2 bits (50), Expect = 4.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 550 PGYPGMQGVEGELNELMEKGGQN*RSTRGIR 642
           PG PG+ G +GE  E    G    +  RG++
Sbjct: 543 PGAPGLPGRDGEKGEPGRPGLPGAKGERGLK 573



 Score = 23.8 bits (49), Expect = 6.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 550 PGYPGMQGVEGELNELMEKGGQ 615
           PG PG+ G +GE     E GG+
Sbjct: 558 PGRPGLPGAKGERGLKGELGGR 579


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 553 GYPGMQGVEGELNELMEKG 609
           G PG+QG+ G+  E+ E+G
Sbjct: 18  GAPGIQGIRGDKGEMGEQG 36



 Score = 24.2 bits (50), Expect = 4.7
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +1

Query: 529 FQVQGNYPGYPGMQGVEGELNELMEKGGQN*RSTRGIR 642
           FQ +    G PG+QGV G      E G +  R   G++
Sbjct: 219 FQGRKGMMGAPGIQGVRGPQGVKGEPGEKGDRGEIGVK 256


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 678 NLVTELGSQRAPFSWP 725
           ++VTEL  Q  PF+WP
Sbjct: 444 SIVTELFPQHPPFNWP 459


>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -1

Query: 257 HDLLQRSCRQIGQIT 213
           H L QRSCR  G+IT
Sbjct: 265 HSLGQRSCRYFGKIT 279


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -2

Query: 616 FALLFPLTHLILPRLPAFQDILDNCLGLEND 524
           + L    +H+    LPA +DIL   +G  N+
Sbjct: 92  YGLFVSFSHMNTLELPALRDILGGSVGFFNN 122


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 816,727
Number of Sequences: 2352
Number of extensions: 17185
Number of successful extensions: 54
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83992206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)