Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0462.Seq
(797 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily ass... 44 1e-04
L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily ass... 44 1e-04
U41273-2|AAA82454.2| 306|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical pr... 39 0.005
AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical... 39 0.005
Z11115-11|CAA77447.1| 161|Caenorhabditis elegans Hypothetical p... 37 0.019
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 37 0.019
AL132876-38|CAD21663.2| 224|Caenorhabditis elegans Hypothetical... 37 0.019
AL033514-11|CAA22083.2| 298|Caenorhabditis elegans Hypothetical... 35 0.059
Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical pr... 35 0.078
AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc... 35 0.078
U97193-12|AAB52441.1| 283|Caenorhabditis elegans Hypothetical p... 34 0.14
U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein ... 34 0.14
AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical ... 34 0.14
Z81051-12|CAB02861.2| 228|Caenorhabditis elegans Hypothetical p... 33 0.18
Z68297-2|CAA92594.3| 522|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z68303-8|CAA92640.2| 273|Caenorhabditis elegans Hypothetical pr... 33 0.24
AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical ... 33 0.24
AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical ... 33 0.24
Z70208-5|CAA94134.1| 201|Caenorhabditis elegans Hypothetical pr... 33 0.31
Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical p... 33 0.31
Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical pr... 33 0.31
Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical pr... 33 0.31
U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger pr... 33 0.31
Z75710-5|CAB54207.1| 240|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z81546-10|CAH10812.1| 674|Caenorhabditis elegans Hypothetical p... 32 0.55
Z81546-9|CAD45596.2| 782|Caenorhabditis elegans Hypothetical pr... 32 0.55
Z81546-8|CAB04456.1| 676|Caenorhabditis elegans Hypothetical pr... 32 0.55
AY313179-1|AAP79304.1| 782|Caenorhabditis elegans myotubularin-... 32 0.55
AY313177-1|AAP79302.1| 676|Caenorhabditis elegans myotubularin-... 32 0.55
AC006791-5|AAF60739.1| 330|Caenorhabditis elegans Hypothetical ... 31 0.72
U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical pr... 31 0.96
U41026-2|AAM51523.1| 295|Caenorhabditis elegans Hypothetical pr... 31 0.96
X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein. 31 1.3
U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of l... 31 1.3
U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of l... 31 1.3
U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of l... 31 1.3
Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical pr... 30 1.7
U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical p... 30 2.2
Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 29 3.9
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 29 3.9
U40415-9|AAK39249.3| 281|Caenorhabditis elegans Hypothetical pr... 29 3.9
AL117195-25|CAB55036.1| 1048|Caenorhabditis elegans Hypothetical... 29 3.9
AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical ... 29 3.9
AL032639-3|CAA21635.1| 283|Caenorhabditis elegans Hypothetical ... 29 5.1
U40421-3|AAA81439.2| 347|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z72504-3|CAA96605.1| 449|Caenorhabditis elegans Hypothetical pr... 28 8.9
AF273784-1|AAG15133.1| 459|Caenorhabditis elegans nuclear recep... 28 8.9
AF016677-8|AAB66140.3| 310|Caenorhabditis elegans Hypothetical ... 28 8.9
AF016666-6|AAB66086.1| 292|Caenorhabditis elegans Hypothetical ... 28 8.9
AC006608-4|AAF39758.2| 381|Caenorhabditis elegans Hypothetical ... 28 8.9
>L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform a protein.
Length = 834
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +3
Query: 267 KCGHVFCATCLKTTLE-RQSDCPKCRSKIKSSRGYHAIYL 383
KC H+FC TC+KT + RQ CPKC S + +H I++
Sbjct: 796 KCYHLFCETCIKTMYDTRQRKCPKCNSNF-GANDFHRIFI 834
>L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform b protein.
Length = 837
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +3
Query: 267 KCGHVFCATCLKTTLE-RQSDCPKCRSKIKSSRGYHAIYL 383
KC H+FC TC+KT + RQ CPKC S + +H I++
Sbjct: 799 KCYHLFCETCIKTMYDTRQRKCPKCNSNF-GANDFHRIFI 837
>U41273-2|AAA82454.2| 306|Caenorhabditis elegans Hypothetical
protein C26B9.6 protein.
Length = 306
Score = 42.7 bits (96), Expect = 3e-04
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +3
Query: 270 CGHVFCATCLKTTLERQSDCPKCRSKIKSS 359
CGH FC CLK+ +DCP CR KI S
Sbjct: 123 CGHEFCYVCLKSNFAMGNDCPVCRGKISPS 152
>U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical
protein ZC13.1b protein.
Length = 398
Score = 40.3 bits (90), Expect = 0.002
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = +3
Query: 267 KCGHVFCATCLKTTLERQSDCPKCRSKI 350
+C HVFC C++T L+++S CP CR+++
Sbjct: 351 ECTHVFCKFCIETWLDQKSTCPICRAEV 378
>Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical
protein F55A11.3 protein.
Length = 610
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 270 CGHVFCATCLKTTLERQSDCPKCRSKIKSSR 362
C HVF A CL++ +RQ CP CR+ I R
Sbjct: 310 CSHVFHAHCLRSWFQRQQTCPTCRTDIWQGR 340
>AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical
protein Y47G6A.31 protein.
Length = 212
Score = 38.7 bits (86), Expect = 0.005
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 258 LATKCGHVFCATCLKTTLERQSDCPKCRSKIKSSR 362
L CGH FC +CL L+ Q CP CR + ++
Sbjct: 50 LLENCGHTFCYSCLFDWLKSQDTCPMCREAVNMTQ 84
>Z11115-11|CAA77447.1| 161|Caenorhabditis elegans Hypothetical
protein ZK637.14 protein.
Length = 161
Score = 36.7 bits (81), Expect = 0.019
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 255 VLATKCGHVFCATCLKTTLERQSDCPKCRSKIKSSR 362
V+ C H F CL LE Q CP CR K+K+ +
Sbjct: 106 VIVMPCKHRFHYFCLTLWLEAQQTCPTCRQKVKTDK 141
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical
protein T13H2.5a protein.
Length = 2471
Score = 36.7 bits (81), Expect = 0.019
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 255 VLATKCGHVFCATCLKTTLERQSD-CPKCRSKIKSSR 362
++ KCGH FC C+ R + CP CR + S R
Sbjct: 173 IMTKKCGHRFCDQCILVAFMRSGNTCPTCRQNLGSKR 209
>AL132876-38|CAD21663.2| 224|Caenorhabditis elegans Hypothetical
protein Y105E8A.14 protein.
Length = 224
Score = 36.7 bits (81), Expect = 0.019
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +3
Query: 270 CGHVFCATCLK-TTLERQSDCPKCRSKIKS 356
CGH FC CLK ++ DCP CR I S
Sbjct: 40 CGHKFCFICLKGVSVSNNGDCPICRGPIDS 69
>AL033514-11|CAA22083.2| 298|Caenorhabditis elegans Hypothetical
protein Y75B8A.10 protein.
Length = 298
Score = 35.1 bits (77), Expect = 0.059
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +3
Query: 267 KCGHVFCATCLKTTLERQSD-CPKCRS 344
+C HVFC TCL T + D CP CR+
Sbjct: 187 RCSHVFCETCLATASKWDFDGCPVCRA 213
>Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical
protein K01G5.1 protein.
Length = 384
Score = 34.7 bits (76), Expect = 0.078
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 258 LATKCGHVFCATCLKTTLERQSDCPKCRSKIKS 356
+ TKC H FC C + ++ S CP C+ ++
Sbjct: 252 IVTKCKHYFCTGCALKSFQKSSKCPICQQNTEN 284
>AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc
finger protein protein.
Length = 384
Score = 34.7 bits (76), Expect = 0.078
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 258 LATKCGHVFCATCLKTTLERQSDCPKCRSKIKS 356
+ TKC H FC C + ++ S CP C+ ++
Sbjct: 252 IVTKCKHYFCTGCALKSFQKSSKCPICQQNTEN 284
>U97193-12|AAB52441.1| 283|Caenorhabditis elegans Hypothetical
protein C06A5.8a protein.
Length = 283
Score = 33.9 bits (74), Expect = 0.14
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Frame = +3
Query: 270 CGHVFCATCLKTTLERQS----DCPKCRSKIK 353
CGH FC C+KT + + +CP CR++ K
Sbjct: 57 CGHTFCTECIKTMQKYGNSAYLECPSCRAETK 88
>U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein 1
protein.
Length = 596
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +3
Query: 261 ATKCGHVFCATCLKTTLERQSD--CPKCRSK 347
A +C H+F CL T L +++D CPKCR +
Sbjct: 390 ALRCSHIFHEKCLHTYLLQRTDQTCPKCRCR 420
>AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical
protein Y54E10BR.3 protein.
Length = 304
Score = 33.9 bits (74), Expect = 0.14
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 261 ATKCGHVFCATCLKTTLERQSDCPKCRSKI 350
A C H+F C++ L+ ++ CP CR K+
Sbjct: 253 ALDCNHIFHRPCIEPWLKTKNSCPVCRQKV 282
>Z81051-12|CAB02861.2| 228|Caenorhabditis elegans Hypothetical
protein C55A6.1 protein.
Length = 228
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +3
Query: 270 CGHVFCATCLK-TTLERQSDCPKCRSKIKSS 359
CGH FC CLK + CP CR I S+
Sbjct: 28 CGHKFCFICLKGVYMNDMGGCPMCRGPIDSN 58
>Z68297-2|CAA92594.3| 522|Caenorhabditis elegans Hypothetical
protein F11A10.3 protein.
Length = 522
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 270 CGHVFCATCLKTTLERQSD-CPKCRSKIKSSRGYHAIYLD 386
C H FC +CL T E ++ CP C + I S H + D
Sbjct: 318 CMHTFCKSCLLTYFESDNNTCPTCGTFIHGSHPTHYVTYD 357
>Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical
protein C36A4.8 protein.
Length = 547
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = +3
Query: 255 VLATKCGHVFCATCLKTTLERQS--DCPKCRSKI--KSSRGYHAIYLDTSSF 398
+L+T C H+FC +C+ ER+ CP CRS + +S R + I + ++
Sbjct: 32 ILST-CFHIFCRSCINACFERKRKVQCPICRSVLDKRSCRDTYQITMAVQNY 82
>Z68303-8|CAA92640.2| 273|Caenorhabditis elegans Hypothetical
protein ZK809.7 protein.
Length = 273
Score = 33.1 bits (72), Expect = 0.24
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 255 VLATKCGHVFCATCLKTTLERQSDCPKC 338
++ KCGHV C TC+ T+ R CP C
Sbjct: 227 MVGQKCGHVACYTCIATS--RNMTCPLC 252
>AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.9 protein.
Length = 244
Score = 33.1 bits (72), Expect = 0.24
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 267 KCGHVFCATCLKTTLERQSDCPKC 338
KCGH C TC+ +E+ PKC
Sbjct: 194 KCGHTICHTCVDRIIEQSFGSPKC 217
>AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.8 protein.
Length = 244
Score = 33.1 bits (72), Expect = 0.24
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 267 KCGHVFCATCLKTTLERQSDCPKC 338
KCGH C TC+ +E+ PKC
Sbjct: 194 KCGHTICHTCVDRIIEQSFGSPKC 217
>Z70208-5|CAA94134.1| 201|Caenorhabditis elegans Hypothetical
protein F54B11.5 protein.
Length = 201
Score = 32.7 bits (71), Expect = 0.31
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +3
Query: 258 LATKCGHVFCATCLKTTLERQSD--CPKCRSKIKS 356
L C H FC C+ +E + D CP C++KI++
Sbjct: 139 LLLPCLHAFCIRCIANEMEYRHDFSCPICKTKIRN 173
>Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 32.7 bits (71), Expect = 0.31
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Frame = +3
Query: 270 CGHVFCATCLKT---TLERQSDCPKCRSK 347
C H FC CL++ TL R CP+CR++
Sbjct: 58 CQHTFCYPCLESCADTLHRNLKCPECRAE 86
>Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical
protein T02C1.1 protein.
Length = 160
Score = 32.7 bits (71), Expect = 0.31
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 267 KCGHVFCATCLKTTLERQSDCPKCRS 344
+CGH +C C+++ L CP CR+
Sbjct: 22 ECGHSYCRFCIESHLNINEKCPLCRA 47
>Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 32.7 bits (71), Expect = 0.31
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Frame = +3
Query: 270 CGHVFCATCLKT---TLERQSDCPKCRSK 347
C H FC CL++ TL R CP+CR++
Sbjct: 58 CQHTFCYPCLESCADTLHRNLKCPECRAE 86
>U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger
protein protein 1 protein.
Length = 381
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Frame = +3
Query: 210 QCXXXXXXXXXXXXIVLATKCGHVFCATCLKTTLERQS----DCPKCRSKIKSS 359
QC + + CGH FC C++ + +CP CR++ KS+
Sbjct: 21 QCQVCYQPFNETTKLARSLHCGHTFCTECIRNVQNYGNSPHLECPTCRAETKSN 74
>Z75710-5|CAB54207.1| 240|Caenorhabditis elegans Hypothetical
protein D1081.9 protein.
Length = 240
Score = 32.3 bits (70), Expect = 0.41
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 264 TKCGHVFCATCLKTTLERQSDCPKCRSKIK 353
T CGHVFC C K S C C+ +K
Sbjct: 21 TACGHVFCQNCTKAAF--NSQCYLCKKPLK 48
>Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical
protein C16C10.7 protein.
Length = 235
Score = 32.3 bits (70), Expect = 0.41
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 270 CGHVFCATCLKTTLERQSD---CPKCRSKIKSSR 362
CGH+FC CL L+ + + CP C+S I ++
Sbjct: 41 CGHLFCWPCLSQWLDTRPNNQVCPVCKSAIDGNK 74
>Z81546-10|CAH10812.1| 674|Caenorhabditis elegans Hypothetical
protein F53A2.8c protein.
Length = 674
Score = 31.9 bits (69), Expect = 0.55
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 270 CGHVFCATCLKTTL-ERQSDCPKCRS 344
CG +FC CLK + ER+ C KC++
Sbjct: 648 CGMIFCRRCLKVSADERERVCDKCKT 673
>Z81546-9|CAD45596.2| 782|Caenorhabditis elegans Hypothetical
protein F53A2.8b protein.
Length = 782
Score = 31.9 bits (69), Expect = 0.55
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 270 CGHVFCATCLKTTL-ERQSDCPKCRS 344
CG +FC CLK + ER+ C KC++
Sbjct: 756 CGMIFCRRCLKVSADERERVCDKCKT 781
>Z81546-8|CAB04456.1| 676|Caenorhabditis elegans Hypothetical
protein F53A2.8a protein.
Length = 676
Score = 31.9 bits (69), Expect = 0.55
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 270 CGHVFCATCLKTTL-ERQSDCPKCRS 344
CG +FC CLK + ER+ C KC++
Sbjct: 650 CGMIFCRRCLKVSADERERVCDKCKT 675
>AY313179-1|AAP79304.1| 782|Caenorhabditis elegans
myotubularin-related protein MTM-6B protein.
Length = 782
Score = 31.9 bits (69), Expect = 0.55
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 270 CGHVFCATCLKTTL-ERQSDCPKCRS 344
CG +FC CLK + ER+ C KC++
Sbjct: 756 CGMIFCRRCLKVSADERERVCDKCKT 781
>AY313177-1|AAP79302.1| 676|Caenorhabditis elegans
myotubularin-related protein MTM-6A protein.
Length = 676
Score = 31.9 bits (69), Expect = 0.55
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 270 CGHVFCATCLKTTL-ERQSDCPKCRS 344
CG +FC CLK + ER+ C KC++
Sbjct: 650 CGMIFCRRCLKVSADERERVCDKCKT 675
>AC006791-5|AAF60739.1| 330|Caenorhabditis elegans Hypothetical
protein Y4C6A.3 protein.
Length = 330
Score = 31.5 bits (68), Expect = 0.72
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +3
Query: 267 KCGHVFCATCLKTTLE--RQSDCPKCRS 344
KCGH C C++ L+ Q CP C+S
Sbjct: 276 KCGHTLCEGCIQNILKHSNQISCPICKS 303
>U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical
protein B0432.13 protein.
Length = 451
Score = 31.1 bits (67), Expect = 0.96
Identities = 10/44 (22%), Positives = 20/44 (45%)
Frame = +3
Query: 255 VLATKCGHVFCATCLKTTLERQSDCPKCRSKIKSSRGYHAIYLD 386
+ A CGH++ C+ + + CP CR + + ++ D
Sbjct: 26 ISAIVCGHIYHHGCISQWIATKRQCPSCRRTVPKNGFVEKLFFD 69
>U41026-2|AAM51523.1| 295|Caenorhabditis elegans Hypothetical
protein C28G1.6 protein.
Length = 295
Score = 31.1 bits (67), Expect = 0.96
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +3
Query: 270 CGHVFCATCLKTTLER-QSDCPKCRSKIK 353
CGHV C C E + CP CR I+
Sbjct: 25 CGHVICPVCASKLFENPEVKCPTCRQPIE 53
>X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein.
Length = 582
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = +3
Query: 270 CGHVFCATCLKTTLERQ---SDCPKCRSKIKSS 359
CGH+ CA CL + + CP CR +IK +
Sbjct: 405 CGHLLCAKCLANWQDSDGGGNTCPFCRYEIKGT 437
>U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform a protein.
Length = 582
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = +3
Query: 270 CGHVFCATCLKTTLERQ---SDCPKCRSKIKSS 359
CGH+ CA CL + + CP CR +IK +
Sbjct: 405 CGHLLCAKCLANWQDSDGGGNTCPFCRYEIKGT 437
>U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform b protein.
Length = 565
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = +3
Query: 270 CGHVFCATCLKTTLERQ---SDCPKCRSKIKSS 359
CGH+ CA CL + + CP CR +IK +
Sbjct: 388 CGHLLCAKCLANWQDSDGGGNTCPFCRYEIKGT 420
>U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform c protein.
Length = 523
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = +3
Query: 270 CGHVFCATCLKTTLERQ---SDCPKCRSKIKSS 359
CGH+ CA CL + + CP CR +IK +
Sbjct: 388 CGHLLCAKCLANWQDSDGGGNTCPFCRYEIKGT 420
>Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical
protein W02A11.3 protein.
Length = 489
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 267 KCGHVFCATCLKTTLERQSDCPKCRSKI 350
+C HVF C+ L+ CP CR +I
Sbjct: 450 RCNHVFHPECIYKWLDINKRCPMCREEI 477
>U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical
protein R02E12.4 protein.
Length = 639
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 270 CGHVFCATCLKTTLERQSDCPKCRSKIK 353
C H CA C L S CP CR++++
Sbjct: 42 CKHSICAGCAGRWLSSCSVCPMCRTRVR 69
>Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 270 CGHVFCATCLKTTLERQSDCPKCRSKIKS 356
C H F CL L + S CP CR I S
Sbjct: 350 CSHQFHDWCLMWWLAQDSSCPTCRCTIPS 378
>Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 270 CGHVFCATCLKTTLERQSDCPKCRSKIKS 356
C H F CL L + S CP CR I S
Sbjct: 350 CSHQFHDWCLMWWLAQDSSCPTCRCTIPS 378
>Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical
protein T02C1.2 protein.
Length = 275
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +3
Query: 267 KCGHVFCATCLKTTLERQSDCPKCRSKIKSSR 362
+C H FC C+ L CP C+ + SR
Sbjct: 114 RCQHSFCKKCIDQCLPLTRKCPSCQQWVYWSR 145
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical
protein K04H4.1b protein.
Length = 1502
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 550 PGYPGMQGVEGELNELMEKGGQN*RSTRG 636
PG PGM G EG+ ++ KG + R G
Sbjct: 72 PGAPGMFGAEGDFGDMGSKGARGDRGLPG 100
Score = 28.7 bits (61), Expect = 5.1
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +1
Query: 550 PGYPGMQGVEGELNELMEKG 609
PGYPG++G +G+L + ++G
Sbjct: 287 PGYPGLKGQKGDLGDAGQRG 306
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical
protein K04H4.1a protein.
Length = 1759
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 550 PGYPGMQGVEGELNELMEKGGQN*RSTRG 636
PG PGM G EG+ ++ KG + R G
Sbjct: 72 PGAPGMFGAEGDFGDMGSKGARGDRGLPG 100
Score = 28.7 bits (61), Expect = 5.1
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +1
Query: 550 PGYPGMQGVEGELNELMEKG 609
PGYPG++G +G+L + ++G
Sbjct: 287 PGYPGLKGQKGDLGDAGQRG 306
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV)
collagen protein.
Length = 1758
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 550 PGYPGMQGVEGELNELMEKGGQN*RSTRG 636
PG PGM G EG+ ++ KG + R G
Sbjct: 72 PGAPGMFGAEGDFGDMGSKGARGDRGLPG 100
Score = 27.9 bits (59), Expect = 8.9
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +1
Query: 550 PGYPGMQGVEGELNEL 597
PGYPG++G +G+L +L
Sbjct: 287 PGYPGLKGQKGDLGDL 302
>U40415-9|AAK39249.3| 281|Caenorhabditis elegans Hypothetical
protein K02G10.1 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 261 ATKCGHVFCATCLKTTLERQSDCPKCR 341
A + G FC TC K +R CP C+
Sbjct: 125 ANESGSKFCFTCNKEAPQRSHHCPLCK 151
>AL117195-25|CAB55036.1| 1048|Caenorhabditis elegans Hypothetical
protein Y57A10A.31 protein.
Length = 1048
Score = 29.1 bits (62), Expect = 3.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 267 KCGHVFCATCLKTTLERQSD 326
+CGHV C TC+ T + + D
Sbjct: 821 ECGHVMCRTCINTQIRSRID 840
>AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical
protein H10E21.5 protein.
Length = 473
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/39 (25%), Positives = 18/39 (46%)
Frame = +3
Query: 252 IVLATKCGHVFCATCLKTTLERQSDCPKCRSKIKSSRGY 368
++ C H++ +C+ L CP C++ I GY
Sbjct: 239 VIRLLPCKHIYHKSCIDPWLLEHRTCPMCKNDILKHFGY 277
>AL032639-3|CAA21635.1| 283|Caenorhabditis elegans Hypothetical
protein Y38F1A.2 protein.
Length = 283
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 6/33 (18%)
Frame = +3
Query: 264 TKCGHVFCATCL------KTTLERQSDCPKCRS 344
T CGH+FC C+ + DC CRS
Sbjct: 118 TDCGHIFCCECIIQYWQQSKAIVTPCDCAMCRS 150
>U40421-3|AAA81439.2| 347|Caenorhabditis elegans Hypothetical
protein C02B8.6 protein.
Length = 347
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +3
Query: 270 CGHVFCATCLKTTLERQS-DCPKCRSKIKSS 359
C H FC C+K +++ +C CR SS
Sbjct: 20 CNHEFCYICIKGSIQNDMLNCAVCRRPFDSS 50
>Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical
protein T01G5.7 protein.
Length = 332
Score = 27.9 bits (59), Expect = 8.9
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 270 CGHVFCATCLKTTLERQSDCPKC 338
CGH C TC+ +T+ P C
Sbjct: 209 CGHTMCHTCIISTINESDTEPIC 231
>Z72504-3|CAA96605.1| 449|Caenorhabditis elegans Hypothetical
protein C29E6.5 protein.
Length = 449
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -3
Query: 681 NLEPLVPYHTGIISNPSRTPLILPS 607
+ +P VP T +I +P+ +PL LPS
Sbjct: 8 HFDPTVPLQTVMIGHPATSPLSLPS 32
>AF273784-1|AAG15133.1| 459|Caenorhabditis elegans nuclear receptor
NHR-43 protein.
Length = 459
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -3
Query: 681 NLEPLVPYHTGIISNPSRTPLILPS 607
+ +P VP T +I +P+ +PL LPS
Sbjct: 18 HFDPTVPLQTVMIGHPATSPLSLPS 42
>AF016677-8|AAB66140.3| 310|Caenorhabditis elegans Hypothetical
protein ZK1240.1 protein.
Length = 310
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/26 (42%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Frame = +3
Query: 267 KCGHVFCATCLKTTLERQS-DCPKCR 341
KCGH C C L+ + CP CR
Sbjct: 27 KCGHSVCQCCATKLLKNSAISCPFCR 52
>AF016666-6|AAB66086.1| 292|Caenorhabditis elegans Hypothetical
protein B0281.8 protein.
Length = 292
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +3
Query: 267 KCGHVFCATCLKTTLER-QSDCPKCR 341
KC H C C+K L+ + CP CR
Sbjct: 27 KCSHTLCEGCIKKLLKNGRVVCPFCR 52
>AC006608-4|AAF39758.2| 381|Caenorhabditis elegans Hypothetical
protein C15F1.5a protein.
Length = 381
Score = 27.9 bits (59), Expect = 8.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 270 CGHVFCATCLKTTLERQSDCP 332
C H FC CLK + ++ CP
Sbjct: 23 CLHTFCTKCLKKSTKKMRVCP 43
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,968,962
Number of Sequences: 27780
Number of extensions: 368585
Number of successful extensions: 1471
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1452
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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