Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0461.Seq
         (795 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    29   0.032
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    27   0.23 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    27   0.23 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   2.8  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   6.5  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   6.5  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   6.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 29.5 bits (63), Expect = 0.032
 Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = -2

Query: 635 HWLICYHWFHFHFIL---YYFAFQQHLELYAHFYFITLHYYY 519
           H+L+C ++F++ FI+    Y+ +   +    H  F+   YY+
Sbjct: 95  HFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYF 136



 Score = 26.2 bits (55), Expect = 0.30
 Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 10/49 (20%)
 Frame = -2

Query: 629 LICYHWFHFHFILY----------YFAFQQHLELYAHFYFITLHYYYFL 513
           L+C ++F++ FIL+          Y+ +  HL     F   T+H  + L
Sbjct: 235 LLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLL 283



 Score = 25.0 bits (52), Expect = 0.70
 Identities = 9/31 (29%), Positives = 13/31 (41%)
 Frame = -2

Query: 605 FHFILYYFAFQQHLELYAHFYFITLHYYYFL 513
           +HF   +  F  HL     F F  +H  + L
Sbjct: 167 YHFFCAFIIFTMHLLFCCAFIFFNMHLLFLL 197



 Score = 24.2 bits (50), Expect = 1.2
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
 Frame = -2

Query: 608 HFHFILYYFAFQQHLELYAHFYFITLHY----YYF 516
           H  F+L    F  HL  Y  F   T+H+    YYF
Sbjct: 69  HLLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYF 103


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 26.6 bits (56), Expect = 0.23
 Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = -2

Query: 623 CYHWFHFHFILYYFAFQQHLELYAHF--YFITLHYYYFL*FTF 501
           C+ W +  ++ Y FA    LE Y  F   +  ++  +F+ F F
Sbjct: 123 CFFWSYQSYMSYIFANIMGLEFYKQFAIEYFQMYVLFFVNFAF 165


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 26.6 bits (56), Expect = 0.23
 Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = -2

Query: 623 CYHWFHFHFILYYFAFQQHLELYAHF--YFITLHYYYFL*FTF 501
           C+ W +  ++ Y FA    LE Y  F   +  ++  +F+ F F
Sbjct: 123 CFFWSYQSYMSYIFANIMGLEFYKQFAIEYFQMYVLFFVNFAF 165


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +3

Query: 108 APHHLQNPILQT*PS 152
           AP HLQ+P  QT PS
Sbjct: 82  APTHLQSPNTQTHPS 96


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 365 VLPFITLSHALIIIF 321
           VL FITL H  I +F
Sbjct: 215 VLQFITLQHTFIWVF 229


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 365 VLPFITLSHALIIIF 321
           VL FITL H  I +F
Sbjct: 215 VLQFITLQHTFIWVF 229


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 365 VLPFITLSHALIIIF 321
           VL FITL H  I +F
Sbjct: 215 VLQFITLQHTFIWVF 229


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,409
Number of Sequences: 336
Number of extensions: 3299
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21583952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)