Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0460.Seq
         (797 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    31   0.014
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    28   0.075
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    27   0.13 
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    25   0.92 
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    25   0.92 
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    25   0.92 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    25   0.92 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    25   0.92 
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    25   0.92 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           25   0.92 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    25   0.92 
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    24   1.2  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   8.6  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   8.6  

>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 30.7 bits (66), Expect = 0.014
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 267 EATENLDEIRDRKENERAVSTEKHKHGITKKLSSITKKRSS 389
           E  E   +I D  +NE A   EKHK G+ K +  + K + S
Sbjct: 55  EGEELKKDIPDALQNECAKCNEKHKEGVRKVIRHLIKNKPS 95


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 28.3 bits (60), Expect = 0.075
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +3

Query: 267 EATENLDEIRDRKENERAVSTEKHKHGITKKLSSITKKR 383
           E  E   +I +  +NE A   EKHK G+ K L  + K +
Sbjct: 56  EGEELKRDIPEALQNECAKCNEKHKEGVRKVLHHLIKNK 94


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 288 EIRDRKENERAVSTEKHKHGITKKLSSITKKR 383
           +I D  +NE A   +KHK GI K +  + K++
Sbjct: 61  DIPDALKNECAKCNDKHKEGIRKVIHYLVKQK 92


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +2

Query: 683 PDTTPPLSTRSSPGAYNGSDIETXL-VNLDQPKRHA 787
           P +TPPLST S+  A   S + + L V+   P + A
Sbjct: 123 PRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPA 158


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +2

Query: 683 PDTTPPLSTRSSPGAYNGSDIETXL-VNLDQPKRHA 787
           P +TPPLST S+  A   S + + L V+   P + A
Sbjct: 123 PRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPA 158


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +2

Query: 683 PDTTPPLSTRSSPGAYNGSDIETXL-VNLDQPKRHA 787
           P +TPPLST S+  A   S + + L V+   P + A
Sbjct: 123 PRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPA 158


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +2

Query: 683 PDTTPPLSTRSSPGAYNGSDIETXL-VNLDQPKRHA 787
           P +TPPLST S+  A   S + + L V+   P + A
Sbjct: 123 PRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPA 158


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +2

Query: 683 PDTTPPLSTRSSPGAYNGSDIETXL-VNLDQPKRHA 787
           P +TPPLST S+  A   S + + L V+   P + A
Sbjct: 123 PRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPA 158


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +2

Query: 683 PDTTPPLSTRSSPGAYNGSDIETXL-VNLDQPKRHA 787
           P +TPPLST S+  A   S + + L V+   P + A
Sbjct: 79  PRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPA 114


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +2

Query: 683 PDTTPPLSTRSSPGAYNGSDIETXL-VNLDQPKRHA 787
           P +TPPLST S+  A   S + + L V+   P + A
Sbjct: 123 PRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPA 158


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +2

Query: 683 PDTTPPLSTRSSPGAYNGSDIETXL-VNLDQPKRHA 787
           P +TPPLST S+  A   S + + L V+   P + A
Sbjct: 123 PRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPA 158


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 683 PDTTPPLSTRSSPGAYNGSDIETXL 757
           P +TPPLST S+  A   S + + L
Sbjct: 123 PRSTPPLSTPSNSNATKSSGLTSPL 147


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 680 GPDTTPPLSTRSSPGAYNGSDIETXLVNLDQP 775
           GP  +PPL+T+S    + G  ++       QP
Sbjct: 150 GPTGSPPLTTQSMNNHHMGHHMQEQHPQHHQP 181


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 680 GPDTTPPLSTRSSPGAYNGSDIETXLVNLDQP 775
           GP  +PPL+T+S    + G  ++       QP
Sbjct: 152 GPTGSPPLTTQSMNNHHMGHHMQEQHPQHHQP 183


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,198
Number of Sequences: 336
Number of extensions: 4199
Number of successful extensions: 19
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)