Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0460.Seq
(797 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual 32 0.11
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 29 1.0
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 28 1.8
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 27 2.4
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 27 2.4
SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3 |Schizosacch... 27 2.4
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 27 4.1
SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange facto... 26 7.2
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 26 7.2
SPBC1289.16c ||SPBC8E4.06|copper amine oxidase |Schizosaccharomy... 26 7.2
SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|c... 26 7.2
SPAC1142.07c |vps32|snf7|vacuolar sorting protein Vps32|Schizosa... 25 9.5
SPAC644.18c |bet3||TRAPP complex subunit Bet3 |Schizosaccharomyc... 25 9.5
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 25 9.5
SPCC622.09 |htb1||histone H2B |Schizosaccharomyces pombe|chr 3||... 25 9.5
SPAC11H11.04 |mam2||pheromone p-factor receptor|Schizosaccharomy... 25 9.5
>SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 706
Score = 31.9 bits (69), Expect = 0.11
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 476 DRSRGRKNRSCKENDDDSITEEMPEPRTSDDPKGSTKWFDDEEAGGLPRMSRG-RPEFSR 652
DR R R RS + +DDD E R S P ++++ DD+ R SR RP SR
Sbjct: 153 DRDRDR-TRSSRFDDDDDDRAPYEESRLSRAPSRASRYDDDDRDHRSRRRSRSRRPGRSR 211
Query: 653 AVRQ 664
+ R+
Sbjct: 212 SRRR 215
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 28.7 bits (61), Expect = 1.0
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +3
Query: 234 TWRTACQEDLKEATENLD-EIRDRKENER-AVSTEKHKHGITKKLSSITKKRSSSPEVIT 407
T RT L E ++ EIR+ ++ AVS ++ K SS +++ SS +
Sbjct: 498 THRTLSYSRLSELSKTFSPEIREPSLTKKTAVSMQESKEEGRSDESSESEESGSSSDESD 557
Query: 408 LTQVGLETKQDTVTPIPVQVASTTDLVAEKIEAVKRMTMIA 530
++ K+D PIPV+ ++T L +K KR + +A
Sbjct: 558 NSE-----KEDRSNPIPVEKRASTVLNTKKKRKAKRNSALA 593
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.9 bits (59), Expect = 1.8
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 198 VAHRITSQTIQSTWRTACQEDLKEA 272
VAH I ++T Q RT C+ ++KE+
Sbjct: 1293 VAHSIDAKTFQGVVRTFCKSEVKES 1317
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 27.5 bits (58), Expect = 2.4
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 252 QEDLKEATENLDEIRDRKENERAVSTEKHKHGITKKLS-SITKKRSSSPEVITLTQVGL 425
+E + A +E R+R+E E + E H K+ + SITK++ E++ ++ L
Sbjct: 957 EERMLAAQRAKEEERERREEEERENDEDHPSRTYKRTTKSITKRQQRREEMVREKEIRL 1015
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 27.5 bits (58), Expect = 2.4
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +3
Query: 240 RTACQEDLKEATE-NLDEIRDRKENERAVSTEKHKHGITKKLSSITKKRSSS 392
+ A +E K++++ ++ + +KE +RA S E K + K+ S K+ SSS
Sbjct: 34 KEAAKEIAKQSSKTDVSPKKSKKEAKRASSPEPSKKSVKKQKKSKKKEESSS 85
>SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 747
Score = 27.5 bits (58), Expect = 2.4
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 3/95 (3%)
Frame = +3
Query: 264 KEATENLDEIR-DRKENERAVSTEKHKHGITKKLSSITKKRSSSPEVI--TLTQVGLETK 434
K A+ L I+ K N STE K+ + TKK + PE+ LTQ +E
Sbjct: 13 KVASSKLKNIKKSSKRNNSQSSTEPRKNATSLDSKKTTKKGVALPEIAERELTQEDIEFF 72
Query: 435 QDTVTPIPVQVASTTDLVAEKIEAVKRMTMIALPK 539
+ + + + + + +K+E R + L K
Sbjct: 73 NENPSSLKYLSSINPEDLGKKVEKGPRPDIYDLKK 107
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 26.6 bits (56), Expect = 4.1
Identities = 21/93 (22%), Positives = 37/93 (39%)
Frame = +3
Query: 144 GRCRRVSQTQDIST*IARVAHRITSQTIQSTWRTACQEDLKEATENLDEIRDRKENERAV 323
GRC+ V + R+AH++ Q S A +E ++ E+ + R +E +
Sbjct: 351 GRCQEVIGRGAFG--VVRIAHKVDPQNSGSETLYAVKEFRRKPAESQKKYTKRLTSEFCI 408
Query: 324 STEKHKHGITKKLSSITKKRSSSPEVITLTQVG 422
S+ + L I + EV+ L G
Sbjct: 409 SSSLRHPNVIHTLDLIQDGKGDYCEVMELCSGG 441
>SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange factor
Sec74|Schizosaccharomyces pombe|chr 1|||Manual
Length = 928
Score = 25.8 bits (54), Expect = 7.2
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 1/114 (0%)
Frame = +3
Query: 270 ATENLDE-IRDRKENERAVSTEKHKHGITKKLSSITKKRSSSPEVITLTQVGLETKQDTV 446
A LDE + K + S K K + L +K S P+V T+T +T + +
Sbjct: 12 ALHGLDEMVSAHKPSPPLPSRRKGKSALRSALEKKNRKSKSKPKV-TITS---DTPKVSS 67
Query: 447 TPIPVQVASTTDLVAEKIEAVKRMTMIALPKKCRNLGRLMIPKGLRNGLTTKKR 608
PV A T D + + L K + +L IPK R+ ++ +
Sbjct: 68 QHSPVSSAYTGDSTTDLDSKSGHSSSQKLSNKVSSALKLTIPKRWRSSKSSSSQ 121
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +2
Query: 479 RSRGRKNRSCKENDDDSITEEMPEPRTSDDPKGSTKWFDDE 601
+ +G+KN+ K D ++E+ P+ + T+ DDE
Sbjct: 59 KKKGKKNKGNKNQVSDDESQELESPQGPKELTAVTELDDDE 99
>SPBC1289.16c ||SPBC8E4.06|copper amine oxidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 794
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +2
Query: 551 PRTSDD-PKGSTKWFDDE 601
P+ SDD PKG +KW D+
Sbjct: 567 PQASDDTPKGLSKWISDD 584
>SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 796
Score = 25.8 bits (54), Expect = 7.2
Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -2
Query: 208 LWATLAIQVDMSCVWLTLRQRPVSRQTLRCFLSRTLFKPQASISVDKYKKHTVV-SMCKF 32
LW+T+ +++ CV + L + +LS +F + Y T++ S +F
Sbjct: 688 LWSTIFLRMIFGCVIMQLTMMGLMSLRKAYWLSTVIFPLLCFTVISAYNFSTMIRSSMQF 747
Query: 31 VFFFY*R 11
V +Y R
Sbjct: 748 VSLYYIR 754
>SPAC1142.07c |vps32|snf7|vacuolar sorting protein
Vps32|Schizosaccharomyces pombe|chr 1|||Manual
Length = 222
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +3
Query: 462 QVASTTDLVAEKIEAVKRMTMIALPKKCRNLGRLMIPKGLRNGL 593
Q+A T++ + KR+ + AL +K + L+ +G RN +
Sbjct: 41 QIAEQTEIARKNATTNKRLALTALKRKKMHENELVKIEGSRNNI 84
>SPAC644.18c |bet3||TRAPP complex subunit Bet3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 183
Score = 25.4 bits (53), Expect = 9.5
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -2
Query: 241 RQVLW---IVCDVILWATLAIQVDMSCVWLTLRQRPVSRQTLRCFLSRTL 101
RQ LW I+C VI A +Q+D+ V+L R +R L R L
Sbjct: 125 RQKLWYSNILCGVIRGALEMLQMDVDAVFLRDILRGDEHTEIRVHLKRIL 174
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +2
Query: 458 STSGIDDRSRGRKNRSCKENDDDSITEEMPEPRTSDDPKGSTKWFDDE 601
S+S D S S ++ND S + + +S+D S+ D E
Sbjct: 107 SSSDESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSE 154
>SPCC622.09 |htb1||histone H2B |Schizosaccharomyces pombe|chr
3|||Manual
Length = 126
Score = 25.4 bits (53), Expect = 9.5
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Frame = +3
Query: 183 T*IARVAHRITSQTIQSTWRTACQEDLKEATENLDEIRDRKENERAVST----EKHKHGI 350
T I+ A RI + + + E K A N +E + AV E KH +
Sbjct: 52 TGISNQAMRILNSFVNDIFERIATEASKLAAYNKKSTISSREIQTAVRLILPGELAKHAV 111
Query: 351 TKKLSSITKKRSSS 392
T+ S+TK SS+
Sbjct: 112 TEGTKSVTKYSSSA 125
>SPAC11H11.04 |mam2||pheromone p-factor receptor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 348
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 4 ICAFNKKKIRIYTLIQRCVFYIYQHLWM 87
ICA ++K RI T+I C+ + W+
Sbjct: 152 ICAHDRKTQRIMTVISACLTVLVLAFWI 179
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,252,107
Number of Sequences: 5004
Number of extensions: 67873
Number of successful extensions: 272
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 272
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 389395636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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