Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0460.Seq
(797 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53775| Best HMM Match : Involucrin2 (HMM E-Value=7.1e-12) 38 0.009
SB_10121| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_19393| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.35
SB_32093| Best HMM Match : MCM (HMM E-Value=0.004) 32 0.62
SB_58158| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.62
SB_56089| Best HMM Match : CLN3 (HMM E-Value=9.8e-07) 31 1.1
SB_43755| Best HMM Match : rve (HMM E-Value=5.6e-11) 31 1.1
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 31 1.4
SB_53578| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 30 2.5
SB_24946| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_4321| Best HMM Match : Ank (HMM E-Value=0) 30 2.5
SB_41895| Best HMM Match : rve (HMM E-Value=0.00076) 30 2.5
SB_53319| Best HMM Match : zf-CW (HMM E-Value=7.7e-17) 29 3.3
SB_48594| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) 29 3.3
SB_56215| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_46611| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_5829| Best HMM Match : S4 (HMM E-Value=4.2) 29 4.4
SB_4858| Best HMM Match : RnaseH (HMM E-Value=1.1) 29 4.4
SB_59606| Best HMM Match : rve (HMM E-Value=0.00032) 29 4.4
SB_46941| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_37802| Best HMM Match : RnaseH (HMM E-Value=0.69) 29 4.4
SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4) 29 4.4
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 29 4.4
SB_19256| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_9972| Best HMM Match : rve (HMM E-Value=0.16) 29 4.4
SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07) 29 5.8
SB_9049| Best HMM Match : SMC_C (HMM E-Value=0.0098) 29 5.8
SB_47989| Best HMM Match : Filament (HMM E-Value=0.27) 29 5.8
SB_24053| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_45179| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_7395| Best HMM Match : SURF6 (HMM E-Value=1.8) 28 7.6
SB_4263| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_22383| Best HMM Match : Herpes_BLRF2 (HMM E-Value=0.59) 28 7.6
>SB_53775| Best HMM Match : Involucrin2 (HMM E-Value=7.1e-12)
Length = 1879
Score = 37.9 bits (84), Expect = 0.009
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 1/129 (0%)
Frame = +3
Query: 57 CFLYLSTLMDA*GLNNVRERKHRRVWRLTGRCRRVSQTQDIST*IARVAHRITSQTIQST 236
C L L + A L R+ + L+ R+ + + + AR + + +
Sbjct: 37 CALLLEQQVQARDLQRERKMVEKMNIELSNARERIQKEKGSTKTTARELRKANKRAAKFE 96
Query: 237 WRTAC-QEDLKEATENLDEIRDRKENERAVSTEKHKHGITKKLSSITKKRSSSPEVITLT 413
+ C +E+LK + L ++ N VST + I KK S KK+S+SPE+ T
Sbjct: 97 IQVNCLKEELKSLNKQLKQVSSG--NSLKVSTVRRMTQIKKKPSQRDKKQSASPEIDTAH 154
Query: 414 QVGLETKQD 440
+G + D
Sbjct: 155 LLGESSDSD 163
>SB_10121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 33.5 bits (73), Expect = 0.20
Identities = 24/89 (26%), Positives = 33/89 (37%)
Frame = +2
Query: 395 RSDYSNPSRTRD*ARYSNTDTSTSGIDDRSRGRKNRSCKENDDDSITEEMPEPRTSDDPK 574
R+D R D N + T D++ GR + +DD T E RT + +
Sbjct: 108 RNDEKRTGRNDDERTGRNDEKRTGRNDEKRTGRNDEERTGRNDDERTGRNDEERTGRNDE 167
Query: 575 GSTKWFDDEEAGGLPRMSRGRPEFSRAVR 661
T DDE G GR + R R
Sbjct: 168 KRTGRNDDERTGRNDEKRTGRNDEKRTGR 196
Score = 32.7 bits (71), Expect = 0.35
Identities = 25/89 (28%), Positives = 32/89 (35%)
Frame = +2
Query: 395 RSDYSNPSRTRD*ARYSNTDTSTSGIDDRSRGRKNRSCKENDDDSITEEMPEPRTSDDPK 574
R+D R D N D T DD GR + +DD T E RT + +
Sbjct: 76 RNDDERTGRNDDERTGRNDDERTGRNDDERTGRNDEKRTGRNDDERTGRNDEKRTGRNDE 135
Query: 575 GSTKWFDDEEAGGLPRMSRGRPEFSRAVR 661
T D+E G GR + R R
Sbjct: 136 KRTGRNDEERTGRNDDERTGRNDEERTGR 164
Score = 32.3 bits (70), Expect = 0.47
Identities = 24/89 (26%), Positives = 32/89 (35%)
Frame = +2
Query: 395 RSDYSNPSRTRD*ARYSNTDTSTSGIDDRSRGRKNRSCKENDDDSITEEMPEPRTSDDPK 574
R+D R + N D T D+ GR + +DD T E RT + +
Sbjct: 132 RNDEKRTGRNDEERTGRNDDERTGRNDEERTGRNDEKRTGRNDDERTGRNDEKRTGRNDE 191
Query: 575 GSTKWFDDEEAGGLPRMSRGRPEFSRAVR 661
T DDE G GR + R R
Sbjct: 192 KRTGRNDDERTGRNDEERTGRNDDERTGR 220
Score = 30.7 bits (66), Expect = 1.4
Identities = 23/89 (25%), Positives = 32/89 (35%)
Frame = +2
Query: 395 RSDYSNPSRTRD*ARYSNTDTSTSGIDDRSRGRKNRSCKENDDDSITEEMPEPRTSDDPK 574
R+D R + N + T DD GR + +DD T + RT + +
Sbjct: 52 RNDEKRTGRNDEKRTGRNDEKRTGRNDDERTGRNDDERTGRNDDERTGRNDDERTGRNDE 111
Query: 575 GSTKWFDDEEAGGLPRMSRGRPEFSRAVR 661
T DDE G GR + R R
Sbjct: 112 KRTGRNDDERTGRNDEKRTGRNDEKRTGR 140
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/89 (24%), Positives = 32/89 (35%)
Frame = +2
Query: 395 RSDYSNPSRTRD*ARYSNTDTSTSGIDDRSRGRKNRSCKENDDDSITEEMPEPRTSDDPK 574
R+D R + N + T D++ GR + +DD T + RT +
Sbjct: 36 RNDEKRTGRNDEKRTGRNDEKRTGRNDEKRTGRNDEKRTGRNDDERTGRNDDERTGRNDD 95
Query: 575 GSTKWFDDEEAGGLPRMSRGRPEFSRAVR 661
T DDE G GR + R R
Sbjct: 96 ERTGRNDDERTGRNDEKRTGRNDDERTGR 124
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/89 (25%), Positives = 31/89 (34%)
Frame = +2
Query: 395 RSDYSNPSRTRD*ARYSNTDTSTSGIDDRSRGRKNRSCKENDDDSITEEMPEPRTSDDPK 574
R+D R D N + T DD GR + +D+ T E RT +
Sbjct: 92 RNDDERTGRNDDERTGRNDEKRTGRNDDERTGRNDEKRTGRNDEKRTGRNDEERTGRNDD 151
Query: 575 GSTKWFDDEEAGGLPRMSRGRPEFSRAVR 661
T D+E G GR + R R
Sbjct: 152 ERTGRNDEERTGRNDEKRTGRNDDERTGR 180
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/89 (25%), Positives = 32/89 (35%)
Frame = +2
Query: 395 RSDYSNPSRTRD*ARYSNTDTSTSGIDDRSRGRKNRSCKENDDDSITEEMPEPRTSDDPK 574
R+D R + N D T D++ GR + +DD T E RT +
Sbjct: 156 RNDEERTGRNDEKRTGRNDDERTGRNDEKRTGRNDEKRTGRNDDERTGRNDEERTGRNDD 215
Query: 575 GSTKWFDDEEAGGLPRMSRGRPEFSRAVR 661
T D+E G GR + R R
Sbjct: 216 ERTGRNDEERTGRNDDERTGRNDEERTGR 244
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/89 (25%), Positives = 31/89 (34%)
Frame = +2
Query: 395 RSDYSNPSRTRD*ARYSNTDTSTSGIDDRSRGRKNRSCKENDDDSITEEMPEPRTSDDPK 574
R+D R + N D T DD GR + +DD T E RT +
Sbjct: 60 RNDEKRTGRNDEKRTGRNDDERTGRNDDERTGRNDDERTGRNDDERTGRNDEKRTGRNDD 119
Query: 575 GSTKWFDDEEAGGLPRMSRGRPEFSRAVR 661
T D++ G GR + R R
Sbjct: 120 ERTGRNDEKRTGRNDEKRTGRNDEERTGR 148
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/72 (27%), Positives = 26/72 (36%)
Frame = +2
Query: 395 RSDYSNPSRTRD*ARYSNTDTSTSGIDDRSRGRKNRSCKENDDDSITEEMPEPRTSDDPK 574
R+D R D N + T DD GR + +DD T E RT +
Sbjct: 188 RNDEKRTGRNDDERTGRNDEERTGRNDDERTGRNDEERTGRNDDERTGRNDEERTGRNDD 247
Query: 575 GSTKWFDDEEAG 610
T D+E G
Sbjct: 248 ERTGRNDEERTG 259
Score = 29.1 bits (62), Expect = 4.4
Identities = 22/89 (24%), Positives = 32/89 (35%)
Frame = +2
Query: 395 RSDYSNPSRTRD*ARYSNTDTSTSGIDDRSRGRKNRSCKENDDDSITEEMPEPRTSDDPK 574
R+D R + N + T DD GR + +D+ T + RT + +
Sbjct: 148 RNDDERTGRNDEERTGRNDEKRTGRNDDERTGRNDEKRTGRNDEKRTGRNDDERTGRNDE 207
Query: 575 GSTKWFDDEEAGGLPRMSRGRPEFSRAVR 661
T DDE G GR + R R
Sbjct: 208 ERTGRNDDERTGRNDEERTGRNDDERTGR 236
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/89 (24%), Positives = 32/89 (35%)
Frame = +2
Query: 395 RSDYSNPSRTRD*ARYSNTDTSTSGIDDRSRGRKNRSCKENDDDSITEEMPEPRTSDDPK 574
R+D R D N D T DD GR + +D+ T + RT + +
Sbjct: 68 RNDEKRTGRNDDERTGRNDDERTGRNDDERTGRNDDERTGRNDEKRTGRNDDERTGRNDE 127
Query: 575 GSTKWFDDEEAGGLPRMSRGRPEFSRAVR 661
T D++ G GR + R R
Sbjct: 128 KRTGRNDEKRTGRNDEERTGRNDDERTGR 156
Score = 28.7 bits (61), Expect = 5.8
Identities = 23/89 (25%), Positives = 31/89 (34%)
Frame = +2
Query: 395 RSDYSNPSRTRD*ARYSNTDTSTSGIDDRSRGRKNRSCKENDDDSITEEMPEPRTSDDPK 574
R+D R + N + T DD GR + +DD T E RT +
Sbjct: 172 RNDDERTGRNDEKRTGRNDEKRTGRNDDERTGRNDEERTGRNDDERTGRNDEERTGRNDD 231
Query: 575 GSTKWFDDEEAGGLPRMSRGRPEFSRAVR 661
T D+E G GR + R R
Sbjct: 232 ERTGRNDEERTGRNDDERTGRNDEERTGR 260
>SB_19393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1660
Score = 32.7 bits (71), Expect = 0.35
Identities = 24/103 (23%), Positives = 50/103 (48%)
Frame = +3
Query: 102 NVRERKHRRVWRLTGRCRRVSQTQDIST*IARVAHRITSQTIQSTWRTACQEDLKEATEN 281
N +RK + G+ R+S ++ + + I ++ + R A +E L+ ++EN
Sbjct: 1120 NYNDRKRDGKKGIDGKRERLSSSRSDDF---QQSKMIKHSHLEKSLRQAMRE-LEHSSEN 1175
Query: 282 LDEIRDRKENERAVSTEKHKHGITKKLSSITKKRSSSPEVITL 410
E RK ++ + K+KHG+ K ++KR +V+++
Sbjct: 1176 SSEEEKRKVRKKKLVEFKNKHGLDVKKMDESEKRKKVQQVMSM 1218
>SB_32093| Best HMM Match : MCM (HMM E-Value=0.004)
Length = 348
Score = 31.9 bits (69), Expect = 0.62
Identities = 26/90 (28%), Positives = 33/90 (36%), Gaps = 6/90 (6%)
Frame = +2
Query: 440 YSNTDTSTSGIDDRSRGRK---NRSCKENDDDSITEEMPEPRTSDDPKG--STKWFDDEE 604
+ N D G DD G N C +NDD+ + T DD G DD
Sbjct: 144 FLNDDEDGGGDDDDGSGGDDDDNDGCDDNDDNGEIHGDTQKYTDDDSGGDDGDGGVDDGN 203
Query: 605 AGGLPRMSRGRPEFSRAVRQLF-CLRGPDT 691
G + P S +RQ + C R DT
Sbjct: 204 GGDYDDDNNDDPPLSSVLRQYYQCQRQADT 233
>SB_58158| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 883
Score = 31.9 bits (69), Expect = 0.62
Identities = 26/90 (28%), Positives = 33/90 (36%), Gaps = 6/90 (6%)
Frame = +2
Query: 440 YSNTDTSTSGIDDRSRGRK---NRSCKENDDDSITEEMPEPRTSDDPKG--STKWFDDEE 604
+ N D G DD G N C +NDD+ + T DD G DD
Sbjct: 159 FLNDDEDGGGDDDDGSGGDDDDNDGCDDNDDNGEIHGDTQKYTDDDSGGDDGDGGVDDGN 218
Query: 605 AGGLPRMSRGRPEFSRAVRQLF-CLRGPDT 691
G + P S +RQ + C R DT
Sbjct: 219 GGDYDDDNNDDPPLSSVLRQYYQCQRQADT 248
>SB_56089| Best HMM Match : CLN3 (HMM E-Value=9.8e-07)
Length = 554
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Frame = +3
Query: 213 TSQTIQSTWRTAC--QEDLKEATENLDEIRDRKENERAVSTEKHKHGITKKLSSITKKRS 386
T +T+ +W C + + + + D+K +VS+EKH + L + S
Sbjct: 27 TEETV--SWNQDCINESQISGNEASRNHSNDQKNEPESVSSEKHLLSQMENLEKEQENSS 84
Query: 387 SSPEVITLTQVGLETKQDTVTPIPVQVASTTDLVAEKIEAVKRM 518
E + Q +++ D +PV+VA L K E +K +
Sbjct: 85 HVTEERSSLQPNVDSPPDQTDDVPVEVAE-DPLALPKNEVLKEV 127
>SB_43755| Best HMM Match : rve (HMM E-Value=5.6e-11)
Length = 461
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
Frame = +3
Query: 114 RKHRRVWRLTGRCRRVSQTQDIST*IARVAHRITSQTIQSTWRTACQ---EDLKEATENL 284
+K R + G C + + IARV HR+T +++ W CQ LK A
Sbjct: 20 KKKRELQSFLGLCTYYRKYVKMFADIARVLHRLTEKSVPFEWTDECQTAFTSLKTALTTA 79
Query: 285 DEIR-DRKENERAVSTEKHKHGITKKLSSI 371
+ E + + T+ I +LS +
Sbjct: 80 PVLAYPTAEGDSVLDTDASADSIDAELSQV 109
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Frame = +2
Query: 398 SDYSNP-SRTRD*ARYSNTDTSTSGID----DRSRGRKNRSCKENDDDSITEEM-PEPRT 559
S+ SNP + T D + +N++ S D D S + S N D+S ++ P+ T
Sbjct: 301 SNNSNPENSTSDNSNSNNSNQDNSNSDDSKPDNSNTNNSNSDNSNSDNSTSDNSNPDNLT 360
Query: 560 SDDPKGSTKWFDDEEAG 610
SD+P D+ +G
Sbjct: 361 SDNPNTDNSGSDNSSSG 377
>SB_53578| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1430
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +3
Query: 309 NERAVSTEKHKHGITKKLSSITKKRSSSPEVITLTQVGLETKQDTVTPIPVQVA 470
N R+VST K G TK +SSSP + ++K +T +PI V V+
Sbjct: 1165 NLRSVSTSKKDGGGRNNSLKRTKCKSSSPRKLQKITTPEKSKLETQSPIKVDVS 1218
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/100 (23%), Positives = 46/100 (46%)
Frame = +3
Query: 96 LNNVRERKHRRVWRLTGRCRRVSQTQDIST*IARVAHRITSQTIQSTWRTACQEDLKEAT 275
L ++ ++ + + RL R + + + + + Q +++ T QE LK A
Sbjct: 233 LAHLERKQMKEMQRLERRRQNIERRTSTVQEHSEKQQAVLEQCLKTRRNTLYQEFLK-AE 291
Query: 276 ENLDEIRDRKENERAVSTEKHKHGITKKLSSITKKRSSSP 395
E + +R++KE E +KH+ I + +S+ R S P
Sbjct: 292 EFMQHLREKKERELNEWRQKHER-IRSRTNSLPAFRRSHP 330
>SB_24946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 822
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +3
Query: 240 RTACQEDLKEATENLDEIRDRKENERAVSTEKHKHGITKKLSSITKKRSS-SPEVITLTQ 416
R ++D K E ++ + KENE+ EK +K +TK+ S +P+ T
Sbjct: 96 RNKQKQDQKNGKEVPEKGGEEKENEKEKENEKRTEKAKEKDVQVTKQNESINPDSPFSTL 155
Query: 417 VGLET-KQDTVTPIPVQVASTT 479
V + T K + +P ++ TT
Sbjct: 156 VKMSTGKNPSTFQLPPELKCTT 177
>SB_4321| Best HMM Match : Ank (HMM E-Value=0)
Length = 915
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +2
Query: 473 DDRSRGRKNRSCKENDDDSITEEMPEPRTSDDPKGSTKWFDDEEAG 610
DD G N SC +NDDD IT + +D + + DD + G
Sbjct: 295 DDHRHGNDN-SCDDNDDDGITGGPKVDGSGNDDRSKDEDDDDVDDG 339
>SB_41895| Best HMM Match : rve (HMM E-Value=0.00076)
Length = 655
Score = 29.9 bits (64), Expect = 2.5
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Frame = +2
Query: 509 KENDDDSITEEMPEPRTSDDPKGSTKWFDDEEAGGLPRMSRGRPEFSRAVRQLFC---LR 679
++ DD T+ +P P D P T D + +P S +RA+ C L+
Sbjct: 370 RDEDDTPATKRLPPPAPPDIPTAIT----DPPSRDVPPQSDADASETRAMDSSHCPSNLQ 425
Query: 680 GPDTTPPLSTRS-SPGAYNGS 739
DT+PP S S S GA + S
Sbjct: 426 DDDTSPPRSLWSYSTGARSPS 446
>SB_53319| Best HMM Match : zf-CW (HMM E-Value=7.7e-17)
Length = 714
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/78 (29%), Positives = 36/78 (46%)
Frame = +2
Query: 320 GVHRETQARHHQEVIINYKKTQFLPRSDYSNPSRTRD*ARYSNTDTSTSGIDDRSRGRKN 499
GVH Q+ + +VI + L + + ++ TRD + TDTST +GR N
Sbjct: 552 GVHDVVQSLANAQVIASSPNVTVLVKDEPADA--TRDGVKRPLTDTSTPTQPPEKKGRPN 609
Query: 500 RSCKENDDDSITEEMPEP 553
+ D+D I + P P
Sbjct: 610 Q-----DNDVIVIDPPSP 622
>SB_48594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 439
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +2
Query: 452 DTSTSGIDDRSRGRKNRSCKENDDDSITEEMPEPRTSDDPKGSTKWFDDEEAGGLPRMSR 631
D + GIDD + G + + DD+ + + SD P DD AGG+ +
Sbjct: 233 DAAPGGIDDAAPGCIDDAAPGGIDDAAAGDTDDADPSDTPDADPSDKDDAVAGGIDDAAP 292
Query: 632 G 634
G
Sbjct: 293 G 293
>SB_12646| Best HMM Match : SSrecog (HMM E-Value=0)
Length = 783
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 183 T*IARVAHRITSQ-TIQSTWRTACQEDLKEATENLDEIRDRKENERAVSTEKHKHGITKK 359
T +++VA + T +S W + ++ + + E + K+N++ S+ K K K
Sbjct: 570 TEVSKVAGEMWKNLTDKSKWEEKAAIEKQKYVQRMKEYNENKKNDKEESSPKKKSPSKKA 629
Query: 360 LSSITKKRSSSP 395
+ +++SSSP
Sbjct: 630 SKAPKEEKSSSP 641
>SB_56215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1505
Score = 29.1 bits (62), Expect = 4.4
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Frame = +2
Query: 503 SCKENDDDSITEEMPEPRTSDDPKGSTKWFDDEEAGGLPRMSRGRPEFSRAVRQLFC--- 673
S + DD T+ +P P D P T D + +P S +RA+ C
Sbjct: 1418 SSADEDDTPATKRLPPPAPPDIPTAIT----DPPSRDVPPQSDADASETRAMDSSHCPSN 1473
Query: 674 LRGPDTTPP-LSTRSS--PGAYNGSDIET 751
L+ DT+PP STR P Y D T
Sbjct: 1474 LQDDDTSPPRRSTRERHLPLRYRDDDFIT 1502
>SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1414
Score = 29.1 bits (62), Expect = 4.4
Identities = 30/96 (31%), Positives = 38/96 (39%), Gaps = 12/96 (12%)
Frame = +2
Query: 401 DYSNPSRTR---D*ARYSNTDTSTSG---IDDRSRGRKNRSC------KENDDDSITEEM 544
D S P R R D R + D T G ++D R R ++N DD +
Sbjct: 528 DNSYPDRARSDGDYDRRGSRDNETRGAKTVEDYPRSRPRDESFERGRPRDNRDDDYSRGR 587
Query: 545 PEPRTSDDPKGSTKWFDDEEAGGLPRMSRGRPEFSR 652
E + D PKG + DE PR R PEF R
Sbjct: 588 -ENKEEDYPKGRHR---DERPEEFPRRGRDEPEFVR 619
>SB_46611| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 354
Score = 29.1 bits (62), Expect = 4.4
Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Frame = +3
Query: 228 QSTWRTACQEDLKEATENLDEIRDRKENERAVSTEKHKHGITKKLSSITKKRSSSPEVIT 407
Q +TA +D +E E E + ENE + + L I +KR +S + +T
Sbjct: 26 QGNVKTARSDDKQEEREK--ERNKKPENEEEFIKKLSDPSLKSSLEKIIQKRRNSVKFVT 83
Query: 408 LTQVGLET-KQDTVTPIPVQVASTTDLVAEKIEAVKRMTM 524
L G+ + + + + S ++ ++E K T+
Sbjct: 84 LQSGGIRVINHEDLCSVITEEESKISVLESEVEQRKTPTL 123
>SB_5829| Best HMM Match : S4 (HMM E-Value=4.2)
Length = 893
Score = 29.1 bits (62), Expect = 4.4
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Frame = +2
Query: 368 NYKKTQFLPRSDYSNPSRTRD*ARYSNTDTSTSGIDDRSRGR-KNRSCKENDDDSITEEM 544
N +T+ PR+ N RTR+ R N D T D R+R + R+ +D T
Sbjct: 806 NDPRTRNDPRT--RNDPRTRNDPRTRN-DPRTRN-DPRTRNDPRTRNDPRTRNDPRTRN- 860
Query: 545 PEPRTSDDPKGSTKWFDD-EEAGGLPRMS 628
+PRT +DP+ K F D + + G+P M+
Sbjct: 861 -DPRTRNDPQKFPKRFQDPKRSPGVPEMN 888
>SB_4858| Best HMM Match : RnaseH (HMM E-Value=1.1)
Length = 512
Score = 29.1 bits (62), Expect = 4.4
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Frame = +2
Query: 503 SCKENDDDSITEEMPEPRTSDDPKGSTKWFDDEEAGGLPRMSRGRPEFSRAVRQLFC--- 673
S + DD T +P P D P T D + +P S +RA+ C
Sbjct: 425 SSADEDDTPATNRLPPPAPPDIPTAIT----DPPSRDVPPQSDADASETRAMDSSHCPSN 480
Query: 674 LRGPDTTPP-LSTRSS--PGAYNGSDIET 751
L+ DT+PP STR P Y +D T
Sbjct: 481 LQDDDTSPPRRSTRERHLPLRYRDNDFIT 509
>SB_59606| Best HMM Match : rve (HMM E-Value=0.00032)
Length = 404
Score = 29.1 bits (62), Expect = 4.4
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Frame = +2
Query: 503 SCKENDDDSITEEMPEPRTSDDPKGSTKWFDDEEAGGLPRMSRGRPEFSRAVRQLFC--- 673
S + DD T +P P D P T D + +P S +RA+ C
Sbjct: 317 SSADEDDTPATNRLPPPAPPDIPTAIT----DPPSRDVPPQSDADASETRAMDSSHCPSN 372
Query: 674 LRGPDTTPP-LSTRSS--PGAYNGSDIET 751
L+ DT+PP STR P Y +D T
Sbjct: 373 LQDDDTSPPRRSTRERHLPLRYRDNDFIT 401
>SB_46941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/80 (20%), Positives = 38/80 (47%)
Frame = +2
Query: 338 QARHHQEVIINYKKTQFLPRSDYSNPSRTRD*ARYSNTDTSTSGIDDRSRGRKNRSCKEN 517
Q + Q+++ N T ++ + + T + Y+N +T+T+ + + N + ++
Sbjct: 139 QQQQQQQILTNTTNTITNTNTNTNTNTNTTN-NNYNNINTTTTTTTNNNNNNNNNNNDDD 197
Query: 518 DDDSITEEMPEPRTSDDPKG 577
DDD ++ + +DD G
Sbjct: 198 DDDDTDDD--DHNNNDDDNG 215
>SB_37802| Best HMM Match : RnaseH (HMM E-Value=0.69)
Length = 756
Score = 29.1 bits (62), Expect = 4.4
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Frame = +2
Query: 503 SCKENDDDSITEEMPEPRTSDDPKGSTKWFDDEEAGGLPRMSRGRPEFSRAVRQLFC--- 673
S + DD T+ +P P D P T D + +P S +RA+ C
Sbjct: 669 SSADEDDTPATKRLPPPAPPDIPTAIT----DPPSRDVPPQSDADASETRAMDSSHCPSN 724
Query: 674 LRGPDTTPP-LSTRSS--PGAYNGSDIET 751
L+ DT+PP STR P Y D T
Sbjct: 725 LQDDDTSPPRRSTRERHLPLRYRDDDFIT 753
>SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4)
Length = 323
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/70 (25%), Positives = 30/70 (42%)
Frame = +2
Query: 398 SDYSNPSRTRD*ARYSNTDTSTSGIDDRSRGRKNRSCKENDDDSITEEMPEPRTSDDPKG 577
SD SN S + + SN ++ D + K E+D+D + E SD+ G
Sbjct: 113 SDESNESDESNESDKSNESDKSNESDKSNESDKRNESDESDEDDESNGSDESNESDESNG 172
Query: 578 STKWFDDEEA 607
S + +E+
Sbjct: 173 SDESNGSDES 182
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 29.1 bits (62), Expect = 4.4
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 8/124 (6%)
Frame = +3
Query: 96 LNNVRER-KHRRVWRLTGRCRRVSQTQDIST*IARVAHRITSQTIQSTWRTACQEDLKEA 272
LN+++ER + R+ + G V+ Q+++ +A A R + A + DLKE
Sbjct: 2793 LNDLQERYEKRQAEQEMGSKNTVTSKQELTIAMATAADRQKVIYSLEQEKQALEHDLKET 2852
Query: 273 TENLDEIRD-----RKENERAVSTEKHKHGITKKLSSITK--KRSSSPEVITLTQVGLET 431
++L +RD ++E + S + G + L S + KR + V TQ+
Sbjct: 2853 RKSLSGVRDDLERVKREARESKSQLEELRGRVEDLESAEEFFKRENERLVRENTQLETSY 2912
Query: 432 KQDT 443
K+ T
Sbjct: 2913 KEST 2916
>SB_19256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 29.1 bits (62), Expect = 4.4
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +3
Query: 204 HRITSQTIQSTWRTACQEDLKEATENLDEIRDRKENERAVSTEKHKH-GITKKLSSITKK 380
H I ++ S R A + ++E TE LD+I R + + HK G T+ ++I +
Sbjct: 204 HEIDAKRADSEIRRA-ESKIREVTEKLDDIASRVRHLKVEQDRSHKELGETRSTTAIVMQ 262
Query: 381 RSSS-PEVITLT 413
+ E+I LT
Sbjct: 263 AVAFWEELIELT 274
>SB_9972| Best HMM Match : rve (HMM E-Value=0.16)
Length = 514
Score = 29.1 bits (62), Expect = 4.4
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Frame = +2
Query: 503 SCKENDDDSITEEMPEPRTSDDPKGSTKWFDDEEAGGLPRMSRGRPEFSRAVRQLFC--- 673
S + DD T+ +P P D P T D + +P S +RA+ C
Sbjct: 427 SSADEDDTPATKRLPPPAPPDIPTAIT----DPPSRDVPPQSDADASETRAMDSSHCPSN 482
Query: 674 LRGPDTTPP-LSTRSS--PGAYNGSDIET 751
L+ DT+PP STR P Y D T
Sbjct: 483 LQDDDTSPPRRSTRERHLPLRYRDDDFIT 511
>SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07)
Length = 844
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2
Query: 416 SRTRD*ARYSNTDTSTSGIDDRSRGRKNRSCKENDDDSITEEMPEPRTSDDP 571
+R R AR+SN D R + R+ D+D + E EP DDP
Sbjct: 244 NRGRQQARHSNWSPRDRNNRDNRRDDRGRNRSRKDEDELEE---EPYVEDDP 292
>SB_9049| Best HMM Match : SMC_C (HMM E-Value=0.0098)
Length = 661
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Frame = +3
Query: 189 IARVAHRITSQTIQSTWRTACQEDLKEATENLDEIRDR--KENERAVSTEKHKHGITKKL 362
+ +VAH++T + + +E K + LDEI +R +E RA + + K+
Sbjct: 471 LKQVAHQLTGIPMGEDVPASLKEAFKILPDTLDEIDERINEEQARAECNYQTDPNVIKEY 530
Query: 363 SSITKKRSSSPEVITLTQVGLETKQDTV 446
S K+ S I + L KQ +
Sbjct: 531 ESRDKEIKSMSGQIDAQESNLAAKQQQI 558
>SB_47989| Best HMM Match : Filament (HMM E-Value=0.27)
Length = 366
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +3
Query: 258 DLKEATENLDEIRDRKENERAVSTEKHKHGITKKLSSITKK-RSSSPEVITLTQVGLETK 434
DL+ E L+E+R R+EN + E+ + G+ ++ + K + E T +
Sbjct: 155 DLRAIAEALNELRQRQENSTKENNERFQ-GLQSSINDLVMKFEKYNTEQHTSIEKLKGQA 213
Query: 435 QDTVTPIPVQVASTTDLVAEKIEAVKRMT 521
D VT + + S + V I + ++ T
Sbjct: 214 DDQVTRLDSKTKSAVEDVRANITSTRQWT 242
>SB_24053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2557
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 533 TEEMPEPRTSDDPKGSTKWFDDEEAGGLPRMSR 631
T M EPR P+G + DDEE GL R
Sbjct: 2433 TMTMKEPRDPTAPQGFQSFLDDEEVKGLSEDER 2465
>SB_45179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 277
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 255 EDLKEATENLDEIRDRKENERAVSTEKHKHGITKKLSSITKKRSS 389
++ K++ E + R R E +R S K + TK+ S TK+R S
Sbjct: 227 KEAKQSFEGSETKRRRSETKRRRSETKRRRSETKRRRSETKRRRS 271
>SB_7395| Best HMM Match : SURF6 (HMM E-Value=1.8)
Length = 1365
Score = 28.3 bits (60), Expect = 7.6
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Frame = +3
Query: 246 ACQEDL--KEATENLDEIRDRKE--NERAVSTEKHKHGITKKLSSITKKRSSSPEVITLT 413
A ++DL KE + E+ + E N VST+K G SS+ RSS E
Sbjct: 415 AARDDLADKERLPSHSELSPKSERANNEVVSTDKDGRGAPVSPSSLGLYRSS--ESADED 472
Query: 414 QVGLETKQ--DTVTPIPVQVASTTDLVAEKIE 503
+VGL T++ +++ + + DL+ E IE
Sbjct: 473 KVGLLTRKRNESMKRLKEKAKVDLDLITEDIE 504
>SB_4263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1586
Score = 28.3 bits (60), Expect = 7.6
Identities = 25/89 (28%), Positives = 35/89 (39%), Gaps = 6/89 (6%)
Frame = +2
Query: 503 SCKENDDDSITEEMPEPRTSDDPKGSTKWFDDEEAGGLPRMSRGRPEFSRAVRQLFC--- 673
S + DD T+ +P P D P T D + +P S +RA+ C
Sbjct: 1499 SSADEDDTPATKRLPPPAPPDIPTAIT----DPPSRDVPPQSDADASETRAMDSSHCPSN 1554
Query: 674 LRGPDTTPPLST---RSSPGAYNGSDIET 751
L+ DT+PP + R P Y D T
Sbjct: 1555 LQDDDTSPPRRSSRERHLPLRYRDDDFIT 1583
>SB_22383| Best HMM Match : Herpes_BLRF2 (HMM E-Value=0.59)
Length = 810
Score = 28.3 bits (60), Expect = 7.6
Identities = 25/89 (28%), Positives = 35/89 (39%), Gaps = 6/89 (6%)
Frame = +2
Query: 503 SCKENDDDSITEEMPEPRTSDDPKGSTKWFDDEEAGGLPRMSRGRPEFSRAVRQLFC--- 673
S + DD T+ +P P D P T D + +P S +RA+ C
Sbjct: 723 SSADEDDTPATKRLPPPAPPDIPTAIT----DPPSRDVPPQSDADASETRAMDSSHCPSN 778
Query: 674 LRGPDTTPPLST---RSSPGAYNGSDIET 751
L+ DT+PP + R P Y D T
Sbjct: 779 LQDDDTSPPRRSSRERHLPLRYRDDDFIT 807
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,525,657
Number of Sequences: 59808
Number of extensions: 570320
Number of successful extensions: 2761
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 2302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2637
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2203769656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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