Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0459.Seq
         (797 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_30515| Best HMM Match : Lyase_8 (HMM E-Value=1.2e-05)               32   0.47 
SB_34512| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.1  
SB_30326| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.3  
SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.8  
SB_47930| Best HMM Match : Vicilin_N (HMM E-Value=1.3)                 28   7.6  
SB_22053| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.6  
SB_9891| Best HMM Match : KE2 (HMM E-Value=1)                          28   7.6  

>SB_30515| Best HMM Match : Lyase_8 (HMM E-Value=1.2e-05)
          Length = 1364

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +3

Query: 213 YYNPRDVGGGMAAFCTASPKP 275
           YYNP+D+GGGMA   TA   P
Sbjct: 926 YYNPKDLGGGMAMRGTAGKTP 946


>SB_34512| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1080

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 26/61 (42%), Positives = 33/61 (54%)
 Frame = +2

Query: 263 QPEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYPQQPENPIFSPTQATELADPTE 442
           Q E A A S   V +P+R  QT +  S  P+Q N+V  PQ  E P  S T A  LA+P E
Sbjct: 625 QHELAVADSP-VVCLPER--QTHSGESATPEQTNQVVEPQM-EEPQGS-TSAQHLAEPDE 679

Query: 443 K 445
           +
Sbjct: 680 Q 680


>SB_30326| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1346

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 22/64 (34%), Positives = 32/64 (50%)
 Frame = +2

Query: 317  RRQTLADTSYVPQQENEVYYPQQPENPIFSPTQATELADPTEKIELYSTTLVPVAKATEA 496
            R  T   T  +    +EV   +QP+ P+ + T  TE+A PT K+   S+T +P    T  
Sbjct: 973  RTTTQKATYSLESTTSEVKLTKQPKIPVSNLTITTEIAAPT-KLTPPSSTELPA--PTRD 1029

Query: 497  PAAP 508
            PA P
Sbjct: 1030 PAQP 1033


>SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1117

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +3

Query: 687 PQWSRXPXPQLPNAYSNRSXEGVANKPTPXGLTV 788
           PQ++R    +L N +     +GV N+P   G++V
Sbjct: 586 PQYARDKLLELQNRFDELETQGVVNRPEDIGISV 619


>SB_47930| Best HMM Match : Vicilin_N (HMM E-Value=1.3)
          Length = 769

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
 Frame = +2

Query: 269 EAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYP---QQPENPIFSP-TQATELADP 436
           + AQAPST Q+ +   R++T    S   Q    +  P   + P + +  P  Q    A P
Sbjct: 181 QTAQAPSTPQIQLSIMRQETPESDSEATQTYLHIENPVSTRPPTDNVNEPDIQPNTRAQP 240

Query: 437 TEKIELYSTTLVPVAKA 487
           T + +  +  L P A A
Sbjct: 241 TSRQQETAAPLSPFAAA 257


>SB_22053| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1670

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
 Frame = +2

Query: 269  EAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYP---QQPENPIFSP-TQATELADP 436
            + AQAPST Q+ +   R++T    S   Q    +  P   + P + +  P  Q    A P
Sbjct: 848  QTAQAPSTPQIQLSIMRQETPESDSEATQTYLHIENPVSTRPPTDNVNEPDIQPNTRAQP 907

Query: 437  TEKIELYSTTLVPVAKA 487
            T + +  +  L P A A
Sbjct: 908  TSRQQETAAPLSPFAAA 924


>SB_9891| Best HMM Match : KE2 (HMM E-Value=1)
          Length = 572

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 23/98 (23%), Positives = 37/98 (37%)
 Frame = +3

Query: 159 GSGDSNRGGLVMSRYYNPYYNPRDVGGGMAAFCTASPKPHRRLQRARCTYLIVAARPLPI 338
           G  D N+GG V++ + N   N  D  G      TA   P R +  + C    +       
Sbjct: 229 GEVDENQGGPVLAGFNNVKQNLFDYSG----VFTARIVPSRYMSTSACQSSAMKVASKKT 284

Query: 339 PATYRNKKTKSITLSNQRTRSSAPLKRPNWLTPLKRSN 452
            +  R +K    + S  + RS     + +   PL+  N
Sbjct: 285 TSVQRKQKVSFASTSKTKNRSLHDSSKLDITAPLQNPN 322


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,443,229
Number of Sequences: 59808
Number of extensions: 478787
Number of successful extensions: 1404
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1398
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2203769656
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)