Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0458.Seq
         (347 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2X1E6 Cluster: Putative uncharacterized protein; n=2; ...    34   0.59 
UniRef50_Q8IBJ1 Cluster: Ubiquitin carboxyl-terminal hydrolase, ...    32   3.1  
UniRef50_Q4E1D9 Cluster: Putative uncharacterized protein; n=3; ...    32   3.1  
UniRef50_UPI0000587F08 Cluster: PREDICTED: similar to GA17812-PA...    31   5.5  
UniRef50_A4LD49 Cluster: Putative uncharacterized protein; n=2; ...    31   7.2  
UniRef50_Q708M4 Cluster: Putative uncharacterized protein; n=1; ...    31   7.2  
UniRef50_Q89A39 Cluster: Protein hflK; n=1; Buchnera aphidicola ...    31   7.2  
UniRef50_Q7V2A3 Cluster: Chaperone protein clpB; n=6; Bacteria|R...    31   7.2  
UniRef50_Q7VBL0 Cluster: Chaperone protein clpB; n=9; Bacteria|R...    31   7.2  
UniRef50_A4XBW4 Cluster: Putative uncharacterized protein; n=1; ...    30   9.5  
UniRef50_Q5B9R3 Cluster: Putative uncharacterized protein; n=1; ...    30   9.5  
UniRef50_O60081 Cluster: Conserved eukaryotic protein; n=1; Schi...    30   9.5  
UniRef50_P33416 Cluster: Heat shock protein 78, mitochondrial pr...    30   9.5  
UniRef50_P37571 Cluster: Negative regulator of genetic competenc...    30   9.5  

>UniRef50_A2X1E6 Cluster: Putative uncharacterized protein; n=2;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 452

 Score = 34.3 bits (75), Expect = 0.59
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +3

Query: 162 GERRTHV*FSYQSNNQEYKSRISYKSIIRVR*SMHPSRSG 281
           GERR +V FS+ S  + Y SR+  K++  +  S H S  G
Sbjct: 310 GERRGNVRFSHDSKRRPYLSRVEVKAVAEITISRHLSSKG 349


>UniRef50_Q8IBJ1 Cluster: Ubiquitin carboxyl-terminal hydrolase,
            putative; n=2; Eukaryota|Rep: Ubiquitin carboxyl-terminal
            hydrolase, putative - Plasmodium falciparum (isolate 3D7)
          Length = 3183

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 14/59 (23%), Positives = 25/59 (42%)
 Frame = +1

Query: 61   NHRVQATTHVCTALCPISHKCAERTHSAERRTVRGSDVHMFNFHINRIIRNTNHESLTK 237
            +H +      C ++ P  +K   R +  ER       +H+FN H+  +   T H  + K
Sbjct: 2895 HHPMTENKTFCLSILPFHYKYTSRLYPIERPKYFYYVIHLFNAHVQSVAAFTGHIKIKK 2953


>UniRef50_Q4E1D9 Cluster: Putative uncharacterized protein; n=3;
           Trypanosoma|Rep: Putative uncharacterized protein -
           Trypanosoma cruzi
          Length = 817

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 13/34 (38%), Positives = 13/34 (38%)
 Frame = +1

Query: 37  CLFYRKSHNHRVQATTHVCTALCPISHKCAERTH 138
           C  YRK HN  V      C    P  H C E  H
Sbjct: 356 CCSYRKQHNSVVHQCNRKCNRKLPCGHACLELCH 389


>UniRef50_UPI0000587F08 Cluster: PREDICTED: similar to GA17812-PA;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           similar to GA17812-PA - Strongylocentrotus purpuratus
          Length = 303

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 15/53 (28%), Positives = 29/53 (54%)
 Frame = -1

Query: 272 ARVHRLSYSYYAFVRDS*FVFLIIRLI*KLNMCTSLPRTVRLSAECVLSAHLW 114
           A VH   Y+YYA          ++R+  ++N+C +L +T ++   CV+++  W
Sbjct: 174 ALVHAFMYTYYALKASR-----LVRIPRQINICLTLIQTSQMVVGCVINSLAW 221


>UniRef50_A4LD49 Cluster: Putative uncharacterized protein; n=2;
           Burkholderia pseudomallei|Rep: Putative uncharacterized
           protein - Burkholderia pseudomallei 305
          Length = 113

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 15/26 (57%), Positives = 16/26 (61%)
 Frame = +2

Query: 257 VDAPEPLRAAESGHEPRGLRRRAPYA 334
           V A  PLRA+E    PRGL RR P A
Sbjct: 25  VSAGSPLRASEPWRPPRGLPRRTPPA 50


>UniRef50_Q708M4 Cluster: Putative uncharacterized protein; n=1;
           Streptococcus phage EJ-1|Rep: Putative uncharacterized
           protein - Streptococcus phage EJ-1
          Length = 115

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +3

Query: 66  QSTGYDTRMYCXMS-DLP*MCRKNAFGRKAHSPGERRTHV*FSYQSNNQEYKSRISYKS 239
           Q+ GYD +++C ++ D+P  C+     R  H     R++V      ++QE   ++  KS
Sbjct: 57  QANGYDMKLFCSVAYDIPAGCKIEVTDRNGHVKVFTRSNVPIGQYWSHQEIAIKLEGKS 115


>UniRef50_Q89A39 Cluster: Protein hflK; n=1; Buchnera aphidicola
           (Baizongia pistaciae)|Rep: Protein hflK - Buchnera
           aphidicola subsp. Baizongia pistaciae
          Length = 417

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +1

Query: 121 CAERTHSAERRTVRGSDVHMFNFHINRIIRNTNHESLTKA 240
           C E+  S  R+ +  SD + F F +N +    N+ SLT++
Sbjct: 322 CMEKIFSHTRKVLTNSDNNFFLFSLNDLFLKNNYNSLTQS 361


>UniRef50_Q7V2A3 Cluster: Chaperone protein clpB; n=6; Bacteria|Rep:
           Chaperone protein clpB - Prochlorococcus marinus subsp.
           pastoris (strain CCMP 1378 / MED4)
          Length = 860

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +2

Query: 212 IQITNLLQKHNTSKIVDAPEPLRAAESGHEPRGLRRRAPYAVTFI 346
           + ++  ++KH+ SKI+ AP      ESG +     R+ PY++  +
Sbjct: 635 LDMSEYMEKHSVSKIIGAPPGYLGFESGGQLTEAVRKNPYSLILL 679


>UniRef50_Q7VBL0 Cluster: Chaperone protein clpB; n=9; Bacteria|Rep:
           Chaperone protein clpB - Prochlorococcus marinus
          Length = 864

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +2

Query: 212 IQITNLLQKHNTSKIVDAPEPLRAAESGHEPRGLRRRAPYAV 337
           I ++  ++KH+ S+++ AP      ESG +     RR PY+V
Sbjct: 639 IDMSEYMEKHSISRLIGAPPGYVGYESGGQLSEAVRRNPYSV 680


>UniRef50_A4XBW4 Cluster: Putative uncharacterized protein; n=1;
           Salinispora tropica CNB-440|Rep: Putative
           uncharacterized protein - Salinispora tropica CNB-440
          Length = 140

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -1

Query: 182 NMCTSLPRTVRLSAECVLSAHLWEIGHXAVHTCVVACTLW-LCDFL*NKHFC 30
           N  T    T RLSA C + A +W+I   +     +AC+ W   D L ++H C
Sbjct: 41  NSTTPTNNTARLSASCPVPASIWQIVDLS-----LACSSWRTSDALRDRHRC 87


>UniRef50_Q5B9R3 Cluster: Putative uncharacterized protein; n=1;
            Emericella nidulans|Rep: Putative uncharacterized protein
            - Emericella nidulans (Aspergillus nidulans)
          Length = 1203

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 19/70 (27%), Positives = 34/70 (48%)
 Frame = +2

Query: 134  RIRPKGAQSGGATYTCLIFISIE*SGIQITNLLQKHNTSKIVDAPEPLRAAESGHEPRGL 313
            ++RP G  +G     C + + +E   ++ +  L   N   ++DA    R  ++ +EP+GL
Sbjct: 1113 QMRPSGLITGYVVSACALLMEVE--ELEKSRRLYGENRRPLLDAFTSSRKEKNDYEPKGL 1170

Query: 314  RRRAPYAVTF 343
              RA    TF
Sbjct: 1171 -DRATQKTTF 1179


>UniRef50_O60081 Cluster: Conserved eukaryotic protein; n=1;
           Schizosaccharomyces pombe|Rep: Conserved eukaryotic
           protein - Schizosaccharomyces pombe (Fission yeast)
          Length = 1502

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
 Frame = -1

Query: 257 LSYSYYAFVRDS*FVFLIIRLI*KLNMCTSLPRTVRLSAECVLSAHLWEIGHXAVHTCVV 78
           LSYS+ +    S  + +++     L      P T+    E +++  LWEI H    T V 
Sbjct: 675 LSYSWRSLKETSSLLTVLLTKCLSLFDEEFTPFTLNYYGELMMT-WLWEIRHRGAFTSVY 733

Query: 77  ACTLWLCDFL--*NKH 36
            C +  C FL   NKH
Sbjct: 734 PCFIEYCSFLFECNKH 749


>UniRef50_P33416 Cluster: Heat shock protein 78, mitochondrial
           precursor; n=48; cellular organisms|Rep: Heat shock
           protein 78, mitochondrial precursor - Saccharomyces
           cerevisiae (Baker's yeast)
          Length = 811

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +2

Query: 233 QKHNTSKIVDAPEPLRAAESGHEPRGLRRRAPYAV 337
           +KH  S+++ AP     +ESG +     RR PYAV
Sbjct: 575 EKHTVSRLIGAPPGYVLSESGGQLTEAVRRKPYAV 609


>UniRef50_P37571 Cluster: Negative regulator of genetic competence
           clpC/mecB; n=31; Bacteria|Rep: Negative regulator of
           genetic competence clpC/mecB - Bacillus subtilis
          Length = 810

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +2

Query: 212 IQITNLLQKHNTSKIVDAPEPLRAAESGHEPRGLRRRAPYAVTFI 346
           I ++  ++KH+TS++V +P      + G +     RR PY+V  +
Sbjct: 572 IDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLL 616


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 346,731,029
Number of Sequences: 1657284
Number of extensions: 6483234
Number of successful extensions: 16891
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16886
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 11131607110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)