Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0458.Seq
         (347 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    27   0.055
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   4.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   4.8  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   4.8  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    20   6.3  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    20   6.3  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    20   6.3  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 27.1 bits (57), Expect = 0.055
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -3

Query: 162 PDCAPFGRMRSFGTFMGDRT*XSTYVCRS 76
           P   P+G  RS G F   +   + YVCRS
Sbjct: 552 PPTKPYGTCRSEGIFSDPKNCAAYYVCRS 580


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 331 VGGAPAQPARLVSRLCRPERL 269
           VGGA A P   V+    PE++
Sbjct: 101 VGGATASPDSFVAAANDPEKM 121


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = -1

Query: 161 RTVRLSAECVLSAHLWEIGHXAVHTCVVACTLWLCDFL*NKHFCTYFQKKKK 6
           RT   +AECV    + E+G   +    V   +  C     K  C   QKK++
Sbjct: 28  RTRNKAAECVFGKQVRELGSQWIPDLGVPIGVLYC----MKCECVPLQKKRR 75


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -3

Query: 255 ILLVLCFCKRFVICIPDYSIDM 190
           IL+V  FC    +C+  Y + +
Sbjct: 252 ILVVQFFCSLVALCLTMYKLSL 273


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 5/10 (50%), Positives = 10/10 (100%)
 Frame = -3

Query: 204 YSIDMKIKHV 175
           YS+D+++KH+
Sbjct: 268 YSLDLELKHI 277


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 5/10 (50%), Positives = 10/10 (100%)
 Frame = -3

Query: 204 YSIDMKIKHV 175
           YS+D+++KH+
Sbjct: 268 YSLDLELKHI 277


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 5/10 (50%), Positives = 10/10 (100%)
 Frame = -3

Query: 204 YSIDMKIKHV 175
           YS+D+++KH+
Sbjct: 588 YSLDLELKHI 597


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,442
Number of Sequences: 336
Number of extensions: 1866
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)