Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0458.Seq
         (347 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g25140.1 68415.m03007 heat shock protein 100, putative / HSP1...    31   0.28 
At5g15450.1 68418.m01808 heat shock protein 100, putative / HSP1...    29   1.1  
At1g62130.1 68414.m07010 AAA-type ATPase family protein contains...    28   1.5  
At5g22920.1 68418.m02680 zinc finger (C3HC4-type RING finger) fa...    27   3.4  
At1g50730.1 68414.m05705 expressed protein                             26   6.0  
At3g61720.1 68416.m06919 C2 domain-containing protein contains I...    26   7.9  

>At2g25140.1 68415.m03007 heat shock protein 100, putative / HSP100,
           putative / heat shock protein clpB, putative /
           HSP100/ClpB, putative similar to HSP100/ClpB GI:9651530
           [Phaseolus lunatus]
          Length = 964

 Score = 30.7 bits (66), Expect = 0.28
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +2

Query: 212 IQITNLLQKHNTSKIVDAPEPLRAAESGHEPRGLRRRAPYAV 337
           + ++  ++KH+ S++V AP      E G +   + RR PY+V
Sbjct: 717 VDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSV 758


>At5g15450.1 68418.m01808 heat shock protein 100, putative / HSP100,
           putative / heat shock protein clpB, putative /
           HSP100/ClpB, putative similar to HSP100/ClpB GI:9651530
           [Phaseolus lunatus]
          Length = 968

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +2

Query: 212 IQITNLLQKHNTSKIVDAPEPLRAAESGHEPRGLRRRAPYAV 337
           I ++  ++KH  S+++ AP      E G +     RR PY+V
Sbjct: 712 IDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTETVRRRPYSV 753


>At1g62130.1 68414.m07010 AAA-type ATPase family protein contains
           Pfam domain, PF00004: ATPase, AAA family
          Length = 1025

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = -1

Query: 134 VLSAHLWEIGHXAVHTCVVACTLWLCD--FL*NKHFCTYFQKK 12
           +L   L+E+ H    TC V   L   +  F+ N HFC+ F+ K
Sbjct: 523 LLVTKLFEVAHDQSRTCPVIIFLKDAEKYFVGNSHFCSAFKSK 565


>At5g22920.1 68418.m02680 zinc finger (C3HC4-type RING finger)
           family protein contains Pfam profiles:PF05495 CHY zinc
           finger, PF00097 zinc finger, C3HC4 type (RING finger)
          Length = 291

 Score = 27.1 bits (57), Expect = 3.4
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +1

Query: 109 ISHKCAERTHSAERRTVRGSDVHMFNFHINRIIRNT 216
           I+HKC+       R+T RGSD H  +  + +++ +T
Sbjct: 255 IAHKCSSCGSYNTRQTQRGSDSHSCSSGMPQVVGST 290


>At1g50730.1 68414.m05705 expressed protein
          Length = 1013

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +1

Query: 64  HRVQATTHVCTALCPISHKCAERTHSAERRTVRGSDVHMFN 186
           H+ Q      T   P+S   A R   A  +TVRG D+H F+
Sbjct: 14  HKSQFLPRSQTQKHPLSSTLASRDQQA--KTVRGRDLHFFD 52


>At3g61720.1 68416.m06919 C2 domain-containing protein contains
           INTERPRO:IPR000008 C2 domain
          Length = 795

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 255 ILLVLCFCKRFVICI 211
           ILL LC+C   V+C+
Sbjct: 734 ILLALCYCSMLVVCL 748


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,436,805
Number of Sequences: 28952
Number of extensions: 144251
Number of successful extensions: 259
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 259
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 429398688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)