Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0457.Seq
         (697 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7F842 Cluster: Predicted protein; n=1; Sclerotinia scl...    36   1.3  
UniRef50_A4FHS0 Cluster: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diph...    34   2.9  
UniRef50_Q4S5L6 Cluster: Chromosome 9 SCAF14729, whole genome sh...    33   5.1  
UniRef50_A6RFY6 Cluster: Transcription factor steA; n=1; Ajellom...    33   5.1  
UniRef50_UPI000023CDB8 Cluster: hypothetical protein FG09571.1; ...    33   8.8  
UniRef50_A6N155 Cluster: Polyubiquitin containing 7 ubiquitin mo...    33   8.8  

>UniRef50_A7F842 Cluster: Predicted protein; n=1; Sclerotinia
           sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
           sclerotiorum 1980
          Length = 598

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 13/42 (30%), Positives = 25/42 (59%)
 Frame = +3

Query: 12  CGVQRNRMKILKHLSVT*RCIKFTVFYSSVLREDSFMYHLYW 137
           CG+  N M+I++HL++  + I+F     ++L    F+  +YW
Sbjct: 346 CGIHSNLMEIMQHLAIFYQSIQFAASSRNLLEPRDFLNDIYW 387


>UniRef50_A4FHS0 Cluster: 1-hydroxy-2-methyl-2-(E)-butenyl
           4-diphosphate reductase, 4Fe-4S protein; n=1;
           Saccharopolyspora erythraea NRRL 2338|Rep:
           1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
           reductase, 4Fe-4S protein - Saccharopolyspora erythraea
           (strain NRRL 23338)
          Length = 222

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = -3

Query: 614 AFEPVTGLLILRHGIRNWLEVKVVGIVNLRVCKSSCPNNVALEAIDG--GSSGLGIAVEL 441
           A EP+ G+  +R GIR    ++ +G    R  ++ CP      A  G  G+ G GIA E+
Sbjct: 156 ADEPLAGMGTVRRGIRALCRLRELGPALDRWARAVCPEPPTATAGPGTEGNVGFGIAKEV 215

Query: 440 RPGDKAP 420
             G+  P
Sbjct: 216 PDGNPGP 222


>UniRef50_Q4S5L6 Cluster: Chromosome 9 SCAF14729, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 9 SCAF14729, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 252

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 31/88 (35%), Positives = 38/88 (43%), Gaps = 7/88 (7%)
 Frame = +1

Query: 406 TPTFGGALSPGRNS-TAMPRPELPPSM-----ASRATLFGHELLQTRRFTMPTTLTSSQF 567
           TPT     SPG  S TA PRP  PPS+       R          T  FT PT  +    
Sbjct: 160 TPTSPRRRSPGATSATASPRPPRPPSLRLWPRRPRRRAAARRPSSTTPFTRPTGCSER-- 217

Query: 568 LIPCRSMSKPVTGSNA-GQQLTIPVFGE 648
            +P R+  +PVT S   G  +T   FG+
Sbjct: 218 -VP-RNPPRPVTSSGCDGGSVTTKGFGD 243


>UniRef50_A6RFY6 Cluster: Transcription factor steA; n=1;
           Ajellomyces capsulatus NAm1|Rep: Transcription factor
           steA - Ajellomyces capsulatus NAm1
          Length = 556

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +1

Query: 400 HVTPTFGGALSP-GRNSTAMPRPELPPSM 483
           H + TF  + SP GR + +MP P+LPPSM
Sbjct: 143 HASTTFSHSTSPMGRATDSMPPPQLPPSM 171


>UniRef50_UPI000023CDB8 Cluster: hypothetical protein FG09571.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG09571.1 - Gibberella zeae PH-1
          Length = 380

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 21/68 (30%), Positives = 33/68 (48%)
 Frame = +1

Query: 424 ALSPGRNSTAMPRPELPPSMASRATLFGHELLQTRRFTMPTTLTSSQFLIPCRSMSKPVT 603
           A S G + T  P PE  PS +     FG ++++  R    T+  ++QF     +M+ PVT
Sbjct: 55  AKSTGNDVTQNPDPEPEPSPSIDEESFGDDIIEIPR----TSQNNAQFSSQAANMTMPVT 110

Query: 604 GSNAGQQL 627
             +A   L
Sbjct: 111 TGDAADML 118


>UniRef50_A6N155 Cluster: Polyubiquitin containing 7 ubiquitin
           monomers; n=3; Eukaryota|Rep: Polyubiquitin containing 7
           ubiquitin monomers - Oryza sativa subsp. indica (Rice)
          Length = 99

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = +1

Query: 439 RNSTAMPRPELPPSM-ASRATLFGHELLQTRRFTMPTTLTSSQFLIPCRSMSKP 597
           R   A PR     S+ AS   + G  L  T R + P+TL S+ F++ CRS+S+P
Sbjct: 6   RTRRAFPRTSSASSLLASSWRMAGPLLTTTSRRSPPSTLCSA-FVVVCRSLSRP 58


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,523,910
Number of Sequences: 1657284
Number of extensions: 13596364
Number of successful extensions: 35953
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 34728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35941
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)