Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0457.Seq
         (697 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   1.7  
AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    24   4.0  
AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     23   9.2  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   9.2  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = +3

Query: 66  RCIKFTVFYSSVLREDSFMYHLYWCL 143
           R + F + ++S+ R+ SF+ +LY+ L
Sbjct: 799 RTLGFILRFTSIFRDQSFLRNLYYAL 824


>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 672 LLEWCPPPFTKNRNG*LLPS 613
           +L W  PPFT N  G  LP+
Sbjct: 172 VLSWKEPPFTWNEIGSYLPT 191


>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +1

Query: 415 FGGALSPGRNSTAMPRPELPPSMASRATLFGHELLQT 525
           F G++SP  +S+++P   L     S     G  ++ T
Sbjct: 4   FNGSISPSSSSSSLPFASLGSGKTSSKQSSGSAIIDT 40


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 601 TGSNAGQQLTIPVFGERWGTPFQQPTTF 684
           TG+   Q+  + + G RW T    PT F
Sbjct: 222 TGTARRQRTAVRLAGTRWNTRQFDPTLF 249


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 730,627
Number of Sequences: 2352
Number of extensions: 15508
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)