Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0456.Seq
         (682 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    31   0.012
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    28   0.062
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    27   0.11 
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    24   1.3  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   1.8  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   9.3  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   9.3  

>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 30.7 bits (66), Expect = 0.012
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 267 EATENLDEIRDRKENERAVSTEKHKHGIXKKLSSITKKRSS 389
           E  E   +I D  +NE A   EKHK G+ K +  + K + S
Sbjct: 55  EGEELKKDIPDALQNECAKCNEKHKEGVRKVIRHLIKNKPS 95


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 28.3 bits (60), Expect = 0.062
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +3

Query: 267 EATENLDEIRDRKENERAVSTEKHKHGIXKKLSSITKKR 383
           E  E   +I +  +NE A   EKHK G+ K L  + K +
Sbjct: 56  EGEELKRDIPEALQNECAKCNEKHKEGVRKVLHHLIKNK 94


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 288 EIRDRKENERAVSTEKHKHGIXKKLSSITKKR 383
           +I D  +NE A   +KHK GI K +  + K++
Sbjct: 61  DIPDALKNECAKCNDKHKEGIRKVIHYLVKQK 92


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 648 NSGTPRLIARHPPASSSSNHFVDPW 574
           +S +P L   H PA S    + DPW
Sbjct: 13  DSTSPLLTPPHNPAYSPPPSYCDPW 37


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 467 VGIDGPDLVAEKIRAVKENDDD 532
           VG     LVA+K+  V +N+DD
Sbjct: 129 VGFYSAYLVADKVTVVSKNNDD 150


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 467 VGIDGPDLVAEKIRAVKEND 526
           VG D P  VA K +  K+N+
Sbjct: 323 VGFDNPKSVALKAQYAKDNN 342


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 116 KTPEGLAAHRSLS*SQPDTRHIDLN 190
           +TP G+++  +L   Q + + IDLN
Sbjct: 472 ETPSGISSLLNLDNQQLELKPIDLN 496


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,857
Number of Sequences: 336
Number of extensions: 3395
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)