Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0456.Seq
(682 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70848-4|AAB09108.1| 869|Caenorhabditis elegans Hypothetical pr... 31 1.0
AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian el... 30 1.3
L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclas... 29 2.3
AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical ... 29 2.3
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 29 3.1
U21321-5|AAL11111.1| 553|Caenorhabditis elegans Hypothetical pr... 29 4.1
U21321-4|AAG00049.1| 587|Caenorhabditis elegans Hypothetical pr... 29 4.1
AC024807-1|AAF59529.5| 704|Caenorhabditis elegans Hypothetical ... 29 4.1
Z68227-11|CAA92516.1| 225|Caenorhabditis elegans Hypothetical p... 28 5.4
AC024842-3|AAP13732.1| 1111|Caenorhabditis elegans Hypothetical ... 28 5.4
AC024842-1|AAF59622.4| 1127|Caenorhabditis elegans Hypothetical ... 28 5.4
Z75542-4|CAA99861.1| 424|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z81493-10|CAB04044.2| 508|Caenorhabditis elegans Hypothetical p... 27 9.4
>U70848-4|AAB09108.1| 869|Caenorhabditis elegans Hypothetical
protein C43G2.2 protein.
Length = 869
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/109 (19%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Frame = +3
Query: 228 QSTWRTACQEDLKEATENLDEIRDRKENERAVSTEKHKHGIXKKLSSITKKRSSSPEVIT 407
+S A Q+ + + ++ L + + + V TEK I KKL + + + ++
Sbjct: 391 KSAQLAAAQDAMIQVSDQLYQFYHQMTQNQGVQTEKSVQEIVKKLRLLARANAEDVPRVS 450
Query: 408 LTQVGLET*ADTVTTDYQYKWASTDRISWPKKF--ELLKRMTMIALREI 548
L G+E+ +T + ++DR+ F E+ K++ + + ++
Sbjct: 451 LADEGVESGTETDVNASRSIPLNSDRLVIAPSFAKEIEKKLASVKIGDV 499
>AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian
elks/cast/erc/rab6 interactingprotein homolog protein 1
protein.
Length = 836
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = +3
Query: 102 NVRERKHRRVWRLTGRCRR-VSQTQDIST*IARVAHRITSQTIQSTWRTACQE--DLKEA 272
+ + H+R+ L R VS T + +++ H + Q + S A +E +L+
Sbjct: 643 SAQNNMHKRIEELEEALRESVSITAEREVHLSQQKHHL--QQVSSQLNEARKEITELRRT 700
Query: 273 TENLDEIRDRKENERAVSTEKHKH 344
+N E DR + RA+ TE+ +H
Sbjct: 701 KQNPSETGDRDQIIRAIETERRQH 724
>L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclase
protein.
Length = 1276
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = +3
Query: 225 IQSTWRTACQEDLKEATENLDEIRDRKENERAVSTEKHKHGIXKKLSSITKKRSSSP 395
++ST R++ D K ++L IR R + + +T K I +KLS T+K+S+ P
Sbjct: 589 LRSTSRSSVNSD-KFDEDSLIPIRFRLRSSSSGTTRKISAMIDRKLSIFTRKKSTPP 644
>AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical
protein T01A4.1c protein.
Length = 1276
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = +3
Query: 225 IQSTWRTACQEDLKEATENLDEIRDRKENERAVSTEKHKHGIXKKLSSITKKRSSSP 395
++ST R++ D K ++L IR R + + +T K I +KLS T+K+S+ P
Sbjct: 589 LRSTSRSSVNSD-KFDEDSLIPIRFRLRSSSSGTTRKISAMIDRKLSIFTRKKSTPP 644
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +3
Query: 288 EIRDRKENERAVSTEKHKHGIXKKLSSITKKRSSSPEVITLTQVGLET*ADTVTTDY 458
E DR+ VSTE + ++ R+S P V + T E+ A+TV T Y
Sbjct: 59 EFSDRRRQPSRVSTEDSEQDQVFVPRAVAPPRASRPIVTSSTTESAESSAETVPTTY 115
>U21321-5|AAL11111.1| 553|Caenorhabditis elegans Hypothetical
protein ZK177.8b protein.
Length = 553
Score = 28.7 bits (61), Expect = 4.1
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
Frame = +3
Query: 249 CQEDLKEATENLDEIRDRKENERAVS-TEKHKHGIXKKLSSITKKRSSSPEVITLTQVGL 425
C DLK ++ E+ + +AV E K + S+ E+ +L V
Sbjct: 272 CIGDLKAIGDSRQELHSKVYQHKAVRFMETLMVDALINAGDFLKYKGSNGELYSLKNVTE 331
Query: 426 ET*ADTVTTDYQYKWASTDRISWPKKFELLKRMTMIALREI 548
+ A TTDY + +I+ PK E + I REI
Sbjct: 332 DVDAFLKTTDYVEQEILNSQITDPKMIEAQTALLKIQRREI 372
>U21321-4|AAG00049.1| 587|Caenorhabditis elegans Hypothetical
protein ZK177.8a protein.
Length = 587
Score = 28.7 bits (61), Expect = 4.1
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
Frame = +3
Query: 249 CQEDLKEATENLDEIRDRKENERAVS-TEKHKHGIXKKLSSITKKRSSSPEVITLTQVGL 425
C DLK ++ E+ + +AV E K + S+ E+ +L V
Sbjct: 306 CIGDLKAIGDSRQELHSKVYQHKAVRFMETLMVDALINAGDFLKYKGSNGELYSLKNVTE 365
Query: 426 ET*ADTVTTDYQYKWASTDRISWPKKFELLKRMTMIALREI 548
+ A TTDY + +I+ PK E + I REI
Sbjct: 366 DVDAFLKTTDYVEQEILNSQITDPKMIEAQTALLKIQRREI 406
>AC024807-1|AAF59529.5| 704|Caenorhabditis elegans Hypothetical
protein Y53G8AL.1 protein.
Length = 704
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 255 EDLKEATENLDEIRDRKENERAVSTEKHKHGIXKKLSSITKKRSSSPE 398
E+L E +E + + D +EN + ++ K GI + L+ +S+PE
Sbjct: 319 ENLVENSEKSEILEDLEENSKNLTENSEKPGILEDLAENPDLEASNPE 366
>Z68227-11|CAA92516.1| 225|Caenorhabditis elegans Hypothetical
protein F49C12.14 protein.
Length = 225
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = -3
Query: 260 VFLTGGTPGALDRL*CNSVGDSGNSGRYVLCLADSTTTTGE 138
+++ GGT G N+V +S NS V CLAD++TTT E
Sbjct: 60 IYINGGTGGVRG---LNAVCNSYNS--MVQCLADASTTTFE 95
>AC024842-3|AAP13732.1| 1111|Caenorhabditis elegans Hypothetical
protein Y59H11AR.2b protein.
Length = 1111
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -1
Query: 250 QAVRQVLWIVCDVILWATLAIQVDMSCVWLTLRQRPVSRQTLR 122
QA+ +W + D + +A L I + + V +TLRQ ++ L+
Sbjct: 210 QAISVTVWYIDDYVWYAALIIVMSLYSVIMTLRQTRSQQRRLQ 252
>AC024842-1|AAF59622.4| 1127|Caenorhabditis elegans Hypothetical
protein Y59H11AR.2a protein.
Length = 1127
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -1
Query: 250 QAVRQVLWIVCDVILWATLAIQVDMSCVWLTLRQRPVSRQTLR 122
QA+ +W + D + +A L I + + V +TLRQ ++ L+
Sbjct: 226 QAISVTVWYIDDYVWYAALIIVMSLYSVIMTLRQTRSQQRRLQ 268
>Z75542-4|CAA99861.1| 424|Caenorhabditis elegans Hypothetical
protein F55D12.4 protein.
Length = 424
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 347 AVLVFLCGHRPLIFFSVPDFIKIFG 273
AVL+F CG+R + +F V I I G
Sbjct: 304 AVLLFSCGYRNIHYFEVASVILIIG 328
>Z81493-10|CAB04044.2| 508|Caenorhabditis elegans Hypothetical
protein F01D5.9 protein.
Length = 508
Score = 27.5 bits (58), Expect = 9.4
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +3
Query: 204 HRITSQTIQ-STWRTA-CQEDLKEATENLDEIRDRKENERAVSTEKHKHGIXKKLSSITK 377
H TS I S W A C E K+ E LDEI + E +V K + K + +
Sbjct: 317 HDTTSAGIGWSLWCLANCPEYQKKCHEELDEIFEGTSRECSVEDLKKMKYLEKCVKEALR 376
Query: 378 KRSSSPEV 401
R S P++
Sbjct: 377 MRPSVPQM 384
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,906,678
Number of Sequences: 27780
Number of extensions: 334272
Number of successful extensions: 1088
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1087
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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