Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0455.Seq
(697 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g48655.3 68418.m06019 zinc finger (C3HC4-type RING finger) fa... 50 2e-06
At5g48655.2 68418.m06018 zinc finger (C3HC4-type RING finger) fa... 50 2e-06
At5g48655.1 68418.m06017 zinc finger (C3HC4-type RING finger) fa... 50 2e-06
At3g07200.1 68416.m00859 zinc finger (C3HC4-type RING finger) fa... 49 3e-06
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 42 3e-04
At5g05130.1 68418.m00544 SNF2 domain-containing protein / helica... 41 7e-04
At1g18660.4 68414.m02326 zinc finger (C3HC4-type RING finger) fa... 40 0.001
At1g18660.3 68414.m02329 zinc finger (C3HC4-type RING finger) fa... 40 0.001
At1g18660.2 68414.m02328 zinc finger (C3HC4-type RING finger) fa... 40 0.001
At1g18660.1 68414.m02327 zinc finger (C3HC4-type RING finger) fa... 40 0.001
At1g65040.2 68414.m07372 zinc finger (C3HC4-type RING finger) fa... 40 0.002
At1g65040.1 68414.m07373 zinc finger (C3HC4-type RING finger) fa... 40 0.002
At3g16090.1 68416.m02033 zinc finger (C3HC4-type RING finger) fa... 40 0.002
At2g26350.1 68415.m03163 zinc-binding peroxisomal integral membr... 39 0.004
At3g62690.1 68416.m07042 zinc finger (C3HC4-type RING finger) fa... 38 0.006
At5g01960.1 68418.m00115 zinc finger (C3HC4-type RING finger) fa... 38 0.008
At3g27330.1 68416.m03418 zinc finger (C3HC4-type RING finger) fa... 38 0.008
At3g03550.1 68416.m00357 zinc finger (C3HC4-type RING finger) fa... 36 0.019
At2g18670.1 68415.m02175 zinc finger (C3HC4-type RING finger) fa... 36 0.019
At4g30400.1 68417.m04318 zinc finger (C3HC4-type RING finger) fa... 36 0.026
At4g17910.1 68417.m02669 zinc finger (C3HC4-type RING finger) fa... 36 0.026
At2g18650.1 68415.m02173 zinc finger (C3HC4-type RING finger) fa... 36 0.026
At1g04020.2 68414.m00389 zinc finger (C3HC4-type RING finger) fa... 36 0.026
At1g04020.1 68414.m00388 zinc finger (C3HC4-type RING finger) fa... 36 0.026
At3g07120.1 68416.m00848 zinc finger (C3HC4-type RING finger) fa... 36 0.034
At2g42350.1 68415.m05241 zinc finger (C3HC4-type RING finger) fa... 36 0.034
At4g09110.1 68417.m01503 zinc finger (C3HC4-type RING finger) fa... 35 0.045
At1g19310.1 68414.m02401 zinc finger (C3HC4-type RING finger) fa... 35 0.045
At2g47560.1 68415.m05935 zinc finger (C3HC4-type RING finger) fa... 35 0.059
At4g12140.1 68417.m01928 zinc finger (C3HC4-type RING finger) fa... 34 0.078
At1g51930.1 68414.m05854 zinc finger (C3HC4-type RING finger) fa... 34 0.078
At5g54990.1 68418.m06848 zinc finger (C3HC4-type RING finger) fa... 34 0.10
At5g17600.1 68418.m02064 zinc finger (C3HC4-type RING finger) fa... 34 0.10
At1g76410.1 68414.m08881 zinc finger (C3HC4-type RING finger) fa... 34 0.10
At1g72220.1 68414.m08350 zinc finger (C3HC4-type RING finger) fa... 34 0.10
At1g18760.1 68414.m02339 zinc finger (C3HC4-type RING finger) fa... 34 0.10
At5g05910.1 68418.m00653 zinc finger (C3HC4-type RING finger) fa... 33 0.14
At5g05810.1 68418.m00639 zinc finger (C3HC4-type RING finger) fa... 33 0.14
At4g23450.1 68417.m03380 zinc finger (C3HC4-type RING finger) fa... 33 0.14
At4g09120.1 68417.m01505 zinc finger (C3HC4-type RING finger) fa... 33 0.14
At4g09100.1 68417.m01501 zinc finger (C3HC4-type RING finger) fa... 33 0.14
At4g05350.1 68417.m00817 zinc finger (C3HC4-type RING finger) fa... 33 0.14
At3g23280.2 68416.m02935 zinc finger (C3HC4-type RING finger) fa... 33 0.14
At3g23280.1 68416.m02934 zinc finger (C3HC4-type RING finger) fa... 33 0.14
At2g44950.1 68415.m05596 zinc finger (C3HC4-type RING finger) fa... 33 0.14
At1g35330.1 68414.m04379 zinc finger (C3HC4-type RING finger) fa... 33 0.14
At1g20823.1 68414.m02608 zinc finger (C3HC4-type RING finger) fa... 33 0.14
At4g30370.1 68417.m04315 zinc finger (C3HC4-type RING finger) fa... 33 0.18
At4g09130.1 68417.m01507 zinc finger (C3HC4-type RING finger) fa... 33 0.18
At2g44580.1 68415.m05548 zinc finger (C3HC4-type RING finger) fa... 33 0.18
At2g27940.1 68415.m03387 zinc finger (C3HC4-type RING finger) fa... 33 0.18
At5g41430.1 68418.m05032 zinc finger (C3HC4-type RING finger) fa... 33 0.24
At4g12190.1 68417.m01936 zinc finger (C3HC4-type RING finger) fa... 33 0.24
At3g05670.1 68416.m00631 PHD finger family protein contains Pfam... 33 0.24
At2g38185.4 68415.m04692 zinc finger (C3HC4-type RING finger) fa... 33 0.24
At2g23780.1 68415.m02840 zinc finger (C3HC4-type RING finger) fa... 33 0.24
At2g20030.1 68415.m02341 zinc finger (C3HC4-type RING finger) fa... 33 0.24
At1g54150.1 68414.m06173 zinc finger (C3HC4-type RING finger) fa... 33 0.24
At5g57750.1 68418.m07219 zinc finger (C3HC4-type RING finger) fa... 32 0.32
At5g43420.1 68418.m05309 zinc finger (C3HC4-type RING finger) fa... 32 0.32
At5g40250.1 68418.m04883 zinc finger (C3HC4-type RING finger) fa... 32 0.32
At5g10380.1 68418.m01204 zinc finger (C3HC4-type RING finger) fa... 32 0.32
At4g35480.1 68417.m05042 zinc finger (C3HC4-type RING finger) fa... 32 0.32
At4g33565.1 68417.m04770 zinc finger (C3HC4-type RING finger) fa... 32 0.32
At4g28890.1 68417.m04129 zinc finger (C3HC4-type RING finger) fa... 32 0.32
At4g21070.1 68417.m03047 BRCT domain-containing protein / zinc f... 32 0.32
At4g14365.1 68417.m02213 zinc finger (C3HC4-type RING finger) fa... 32 0.32
At3g10910.1 68416.m01313 zinc finger (C3HC4-type RING finger) fa... 32 0.32
At2g42030.1 68415.m05198 zinc finger (C3HC4-type RING finger) fa... 32 0.32
At2g40830.3 68415.m05041 zinc finger (C3HC4-type RING finger) fa... 32 0.32
At2g40830.2 68415.m05040 zinc finger (C3HC4-type RING finger) fa... 32 0.32
At2g40830.1 68415.m05039 zinc finger (C3HC4-type RING finger) fa... 32 0.32
At5g58580.1 68418.m07341 zinc finger (C3HC4-type RING finger) fa... 32 0.42
At5g47610.1 68418.m05876 zinc finger (C3HC4-type RING finger) fa... 32 0.42
At5g15790.2 68418.m01847 zinc finger (C3HC4-type RING finger) fa... 32 0.42
At5g15790.1 68418.m01846 zinc finger (C3HC4-type RING finger) fa... 32 0.42
At5g13530.1 68418.m01562 protein kinase family protein / ankyrin... 32 0.42
At5g05280.1 68418.m00567 zinc finger (C3HC4-type RING finger) fa... 32 0.42
At4g13100.2 68417.m02042 zinc finger (C3HC4-type RING finger) fa... 32 0.42
At4g13100.1 68417.m02041 zinc finger (C3HC4-type RING finger) fa... 32 0.42
At3g25030.1 68416.m03128 zinc finger (C3HC4-type RING finger) fa... 32 0.42
At3g05200.1 68416.m00567 zinc finger (C3HC4-type RING finger) fa... 32 0.42
At3g02290.2 68416.m00211 zinc finger (C3HC4-type RING finger) fa... 32 0.42
At3g02290.1 68416.m00210 zinc finger (C3HC4-type RING finger) fa... 32 0.42
At2g38185.3 68415.m04691 zinc finger (C3HC4-type RING finger) fa... 32 0.42
At2g38185.2 68415.m04690 zinc finger (C3HC4-type RING finger) fa... 32 0.42
At2g38185.1 68415.m04689 zinc finger (C3HC4-type RING finger) fa... 32 0.42
At1g74990.1 68414.m08705 zinc finger (C3HC4-type RING finger) fa... 32 0.42
At1g74410.1 68414.m08620 zinc finger (C3HC4-type RING finger) fa... 32 0.42
At1g55255.1 68414.m06311 zinc finger (C3HC4-type RING finger) fa... 32 0.42
At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger) fa... 31 0.55
At4g00335.2 68417.m00044 zinc finger (C3HC4-type RING finger) fa... 31 0.55
At4g00335.1 68417.m00043 zinc finger (C3HC4-type RING finger) fa... 31 0.55
At2g42360.1 68415.m05242 zinc finger (C3HC4-type RING finger) fa... 31 0.55
At2g35000.1 68415.m04294 zinc finger (C3HC4-type RING finger) fa... 31 0.55
At2g29840.1 68415.m03624 zinc finger (C3HC4-type RING finger) fa... 31 0.55
At1g49220.1 68414.m05518 zinc finger (C3HC4-type RING finger) fa... 31 0.55
At1g17970.1 68414.m02223 zinc finger (C3HC4-type RING finger) fa... 31 0.55
At5g42940.1 68418.m05235 zinc finger (C3HC4-type RING finger) fa... 31 0.73
At5g38895.1 68418.m04704 zinc finger (C3HC4-type RING finger) fa... 31 0.73
At5g20910.1 68418.m02483 zinc finger (C3HC4-type RING finger) fa... 31 0.73
At5g01880.1 68418.m00107 zinc finger (C3HC4-type RING finger) fa... 31 0.73
At5g01520.1 68418.m00067 zinc finger (C3HC4-type RING finger) fa... 31 0.73
At3g48030.1 68416.m05236 hypoxia-responsive family protein / zin... 31 0.73
At3g16720.1 68416.m02135 zinc finger (C3HC4-type RING finger) fa... 31 0.73
At3g16600.1 68416.m02122 SNF2 domain-containing protein / helica... 31 0.73
At2g37580.1 68415.m04610 zinc finger (C3HC4-type RING finger) fa... 31 0.73
At2g20650.2 68415.m02422 zinc finger (C3HC4-type RING finger) fa... 31 0.73
At2g20650.1 68415.m02421 zinc finger (C3HC4-type RING finger) fa... 31 0.73
At1g77830.1 68414.m09068 zinc finger (C3HC4-type RING finger) fa... 31 0.73
At1g72200.1 68414.m08348 zinc finger (C3HC4-type RING finger) fa... 31 0.73
At5g46650.1 68418.m05748 zinc finger (C3HC4-type RING finger) fa... 31 0.96
At4g15975.1 68417.m02425 zinc finger (C3HC4-type RING finger) fa... 31 0.96
At4g03510.2 68417.m00479 zinc finger (C3HC4-type RING finger) fa... 31 0.96
At4g03510.1 68417.m00478 zinc finger (C3HC4-type RING finger) fa... 31 0.96
At3g58030.3 68416.m06469 zinc finger (C3HC4-type RING finger) fa... 31 0.96
At3g58030.2 68416.m06468 zinc finger (C3HC4-type RING finger) fa... 31 0.96
At3g58030.1 68416.m06467 zinc finger (C3HC4-type RING finger) fa... 31 0.96
At3g54360.1 68416.m06008 expressed protein DNA-binding Mel-18 pr... 31 0.96
At2g34990.1 68415.m04293 zinc finger (C3HC4-type RING finger) fa... 31 0.96
At2g17450.1 68415.m02014 zinc finger (C3HC4-type RING finger) fa... 31 0.96
At2g04240.2 68415.m00413 zinc finger (C3HC4-type RING finger) fa... 31 0.96
At2g04240.1 68415.m00412 zinc finger (C3HC4-type RING finger) fa... 31 0.96
At1g49210.1 68414.m05517 zinc finger (C3HC4-type RING finger) fa... 31 0.96
At1g45180.1 68414.m05180 zinc finger (C3HC4-type RING finger) fa... 31 0.96
At1g22500.1 68414.m02811 zinc finger (C3HC4-type RING finger) fa... 31 0.96
At5g37270.1 68418.m04477 zinc finger (C3HC4-type RING finger) fa... 30 1.3
At5g37230.1 68418.m04472 zinc finger (C3HC4-type RING finger) fa... 30 1.3
At5g27420.1 68418.m03273 zinc finger (C3HC4-type RING finger) fa... 30 1.3
At4g22250.1 68417.m03219 zinc finger (C3HC4-type RING finger) fa... 30 1.3
At4g12210.1 68417.m01938 zinc finger (C3HC4-type RING finger) fa... 30 1.3
At4g10160.1 68417.m01662 zinc finger (C3HC4-type RING finger) fa... 30 1.3
At3g19950.1 68416.m02525 zinc finger (C3HC4-type RING finger) fa... 30 1.3
At3g14320.1 68416.m01811 zinc finger (C3HC4-type RING finger) fa... 30 1.3
At2g37150.2 68415.m04558 zinc finger (C3HC4-type RING finger) fa... 30 1.3
At2g37150.1 68415.m04557 zinc finger (C3HC4-type RING finger) fa... 30 1.3
At1g73760.1 68414.m08540 zinc finger (C3HC4-type RING finger) fa... 30 1.3
At1g49200.1 68414.m05516 zinc finger (C3HC4-type RING finger) fa... 30 1.3
At1g23980.1 68414.m03028 zinc finger (C3HC4-type RING finger) fa... 30 1.3
At1g04360.1 68414.m00426 zinc finger (C3HC4-type RING finger) fa... 30 1.3
At5g41440.1 68418.m05033 zinc finger (C3HC4-type RING finger) fa... 30 1.7
At5g37250.1 68418.m04475 zinc finger (C3HC4-type RING finger) fa... 30 1.7
At5g05530.1 68418.m00600 zinc finger (C3HC4-type RING finger) fa... 30 1.7
At4g28370.1 68417.m04061 zinc finger (C3HC4-type RING finger) fa... 30 1.7
At4g24015.1 68417.m03451 zinc finger (RING-H2 type) protein-rela... 30 1.7
At3g18930.2 68416.m02403 zinc finger (C3HC4-type RING finger) fa... 30 1.7
At3g18930.1 68416.m02402 zinc finger (C3HC4-type RING finger) fa... 30 1.7
At3g18773.1 68416.m02383 zinc finger (C3HC4-type RING finger) fa... 30 1.7
At2g25410.1 68415.m03043 hypothetical protein 30 1.7
At1g55530.1 68414.m06353 zinc finger (C3HC4-type RING finger) fa... 30 1.7
At1g53010.1 68414.m06001 zinc finger (C3HC4-type RING finger) fa... 30 1.7
At1g50410.1 68414.m05650 SNF2 domain-containing protein / helica... 30 1.7
At3g13430.1 68416.m01688 zinc finger (C3HC4-type RING finger) fa... 29 2.2
At3g11110.1 68416.m01345 zinc finger (C3HC4-type RING finger) fa... 29 2.2
At3g10815.1 68416.m01302 zinc finger (C3HC4-type RING finger) fa... 29 2.2
At2g01735.1 68415.m00102 zinc finger (C3HC4-type RING finger) fa... 29 2.2
At1g80400.1 68414.m09412 zinc finger (C3HC4-type RING finger) fa... 29 2.2
At1g72310.1 68414.m08359 zinc finger (C3HC4-type RING finger) fa... 29 2.2
At1g62370.1 68414.m07037 zinc finger (C3HC4-type RING finger) fa... 29 2.2
At1g49850.1 68414.m05589 zinc finger (C3HC4-type RING finger) fa... 29 2.2
At1g24440.1 68414.m03079 expressed protein similar to MTD2 [Medi... 29 2.2
At5g66070.1 68418.m08324 zinc finger (C3HC4-type RING finger) fa... 29 2.9
At5g58787.1 68418.m07365 zinc finger (C3HC4-type RING finger) fa... 29 2.9
At5g41350.1 68418.m05025 zinc finger (C3HC4-type RING finger) fa... 29 2.9
At4g03000.2 68417.m00408 expressed protein contains similarity t... 29 2.9
At4g03000.1 68417.m00407 expressed protein contains similarity t... 29 2.9
At3g60220.1 68416.m06730 zinc finger (C3HC4-type RING finger) fa... 29 2.9
At3g56580.2 68416.m06292 zinc finger (C3HC4-type RING finger) fa... 29 2.9
At3g56580.1 68416.m06291 zinc finger (C3HC4-type RING finger) fa... 29 2.9
At2g17730.1 68415.m02054 zinc finger (C3HC4-type RING finger) fa... 29 2.9
At1g61140.1 68414.m06888 SNF2 domain-containing protein / helica... 29 2.9
At1g53820.1 68414.m06126 zinc finger (C3HC4-type RING finger) fa... 29 2.9
At1g11100.1 68414.m01271 SNF2 domain-containing protein / helica... 29 2.9
At5g64920.1 68418.m08166 COP1-interacting protein (CIP8) / zinc ... 29 3.9
At5g39550.1 68418.m04791 zinc finger (C3HC4-type RING finger) fa... 29 3.9
At5g37280.1 68418.m04478 zinc finger (C3HC4-type RING finger) fa... 29 3.9
At5g07040.1 68418.m00797 zinc finger (C3HC4-type RING finger) fa... 29 3.9
At5g01450.1 68418.m00058 expressed protein 29 3.9
At4g27470.1 68417.m03947 zinc finger (C3HC4-type RING finger) fa... 29 3.9
At4g10150.1 68417.m01660 zinc finger (C3HC4-type RING finger) fa... 29 3.9
At3g47160.1 68416.m05120 expressed protein similar to MTD2 [Medi... 29 3.9
At3g46620.1 68416.m05061 zinc finger (C3HC4-type RING finger) fa... 29 3.9
At3g15740.1 68416.m01994 zinc finger (C3HC4-type RING finger) fa... 29 3.9
At2g46495.1 68415.m05788 zinc finger (C3HC4-type RING finger) fa... 29 3.9
At2g39100.1 68415.m04804 zinc finger (C3HC4-type RING finger) fa... 29 3.9
At2g38920.1 68415.m04784 SPX (SYG1/Pho81/XPR1) domain-containing... 29 3.9
At2g35910.1 68415.m04408 zinc finger (C3HC4-type RING finger) fa... 29 3.9
At2g26135.1 68415.m03136 zinc finger (C3HC4-type RING finger) fa... 29 3.9
At1g66050.1 68414.m07497 zinc finger (C3HC4-type RING finger) fa... 29 3.9
At1g66040.1 68414.m07495 zinc finger (C3HC4-type RING finger) fa... 29 3.9
At1g63170.1 68414.m07139 zinc finger (C3HC4-type RING finger) fa... 29 3.9
At1g53190.1 68414.m06028 zinc finger (C3HC4-type RING finger) fa... 29 3.9
At1g18770.1 68414.m02340 zinc finger (C3HC4-type RING finger) fa... 29 3.9
At5g41450.1 68418.m05034 zinc finger (C3HC4-type RING finger) fa... 28 5.1
At4g35840.1 68417.m05091 zinc finger (C3HC4-type RING finger) fa... 28 5.1
At4g26400.2 68417.m03800 zinc finger (C3HC4-type RING finger) fa... 28 5.1
At4g26400.1 68417.m03799 zinc finger (C3HC4-type RING finger) fa... 28 5.1
At4g17920.1 68417.m02670 zinc finger (C3HC4-type RING finger) fa... 28 5.1
At3g58720.1 68416.m06545 zinc finger (C3HC4-type RING finger) fa... 28 5.1
At3g20010.1 68416.m02531 SNF2 domain-containing protein / helica... 28 5.1
At2g15530.2 68415.m01778 zinc finger (C3HC4-type RING finger) fa... 28 5.1
At2g15530.1 68415.m01777 zinc finger (C3HC4-type RING finger) fa... 28 5.1
At1g74620.1 68414.m08642 zinc finger (C3HC4-type RING finger) fa... 28 5.1
At1g68070.1 68414.m07776 zinc finger (C3HC4-type RING finger) fa... 28 5.1
At1g28040.1 68414.m03433 zinc finger (C3HC4-type RING finger) fa... 28 5.1
At1g14200.1 68414.m01680 zinc finger (C3HC4-type RING finger) fa... 28 5.1
At5g42200.1 68418.m05136 zinc finger (C3HC4-type RING finger) fa... 28 6.8
At4g34040.1 68417.m04830 zinc finger (C3HC4-type RING finger) fa... 28 6.8
At4g32600.1 68417.m04642 zinc finger (C3HC4-type RING finger) fa... 28 6.8
At4g18110.1 68417.m02693 zinc finger (C3HC4-type RING finger) fa... 28 6.8
At4g17245.1 68417.m02593 zinc finger (C3HC4-type RING finger) fa... 28 6.8
At4g11680.1 68417.m01866 zinc finger (C3HC4-type RING finger) fa... 28 6.8
At4g08590.1 68417.m01412 zinc finger (C3HC4-type RING finger) fa... 28 6.8
At3g60080.1 68416.m06709 zinc finger (C3HC4-type RING finger) fa... 28 6.8
At3g55530.1 68416.m06166 zinc finger (C3HC4-type RING finger) fa... 28 6.8
At3g23060.1 68416.m02907 zinc finger (C3HC4-type RING finger) fa... 28 6.8
At2g35420.1 68415.m04341 zinc finger (C3HC4-type RING finger) fa... 28 6.8
At1g70910.1 68414.m08182 zinc finger (C3HC4-type RING finger) fa... 28 6.8
At1g68180.1 68414.m07788 zinc finger (C3HC4-type RING finger) fa... 28 6.8
At5g43530.1 68418.m05322 SNF2 domain-containing protein / helica... 27 9.0
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 27 9.0
At5g04460.1 68418.m00443 expressed protein 27 9.0
At3g63530.1 68416.m07156 zinc finger (C3HC4-type RING finger) fa... 27 9.0
At3g61550.1 68416.m06894 zinc finger (C3HC4-type RING finger) fa... 27 9.0
At3g14970.1 68416.m01893 zinc finger (C3HC4-type RING finger) fa... 27 9.0
At2g46160.1 68415.m05740 zinc finger (C3HC4-type RING finger) fa... 27 9.0
At2g34000.1 68415.m04163 zinc finger protein-related contains we... 27 9.0
At2g15580.1 68415.m01784 zinc finger (C3HC4-type RING finger) fa... 27 9.0
At2g03000.1 68415.m00252 zinc finger (C3HC4-type RING finger) fa... 27 9.0
At1g74870.1 68414.m08677 expressed protein contains similarity t... 27 9.0
At1g67180.1 68414.m07642 zinc finger (C3HC4-type RING finger) fa... 27 9.0
At1g42540.1 68414.m04905 glutamate receptor family protein (GLR3... 27 9.0
At1g18780.1 68414.m02341 zinc finger (C3HC4-type RING finger) fa... 27 9.0
At1g12760.1 68414.m01481 zinc finger (C3HC4-type RING finger) fa... 27 9.0
At1g04790.1 68414.m00475 zinc finger (C3HC4-type RING finger) fa... 27 9.0
>At5g48655.3 68418.m06019 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 203
Score = 49.6 bits (113), Expect = 2e-06
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +2
Query: 260 ATKCGHVFCATCLKTTLERQSDCPKCRSKIKSSRGYHAIYLDTS 391
+TKCGH+FC C+K + RQ CP CR K+ +++ ++L T+
Sbjct: 160 STKCGHIFCKGCIKMAISRQGKCPTCRKKV-TAKELIRVFLPTT 202
>At5g48655.2 68418.m06018 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 203
Score = 49.6 bits (113), Expect = 2e-06
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +2
Query: 260 ATKCGHVFCATCLKTTLERQSDCPKCRSKIKSSRGYHAIYLDTS 391
+TKCGH+FC C+K + RQ CP CR K+ +++ ++L T+
Sbjct: 160 STKCGHIFCKGCIKMAISRQGKCPTCRKKV-TAKELIRVFLPTT 202
>At5g48655.1 68418.m06017 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 203
Score = 49.6 bits (113), Expect = 2e-06
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +2
Query: 260 ATKCGHVFCATCLKTTLERQSDCPKCRSKIKSSRGYHAIYLDTS 391
+TKCGH+FC C+K + RQ CP CR K+ +++ ++L T+
Sbjct: 160 STKCGHIFCKGCIKMAISRQGKCPTCRKKV-TAKELIRVFLPTT 202
>At3g07200.1 68416.m00859 zinc finger (C3HC4-type RING finger)
family protein contains Pfam PF00097: Zinc finger, C3HC4
type (RING finger)
Length = 182
Score = 48.8 bits (111), Expect = 3e-06
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +2
Query: 260 ATKCGHVFCATCLKTTLERQSDCPKCRSKI 349
+TKCGH+FC C+K L Q+ CP CR KI
Sbjct: 139 STKCGHIFCKKCIKNALSLQAKCPTCRKKI 168
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQSDCPKCRSKIKSSRGYHAIYLD 385
T CGH FC C+ T L +SDCP C + +++ Y LD
Sbjct: 65 TACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNFLLD 105
>At5g05130.1 68418.m00544 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to transcription
factor RUSH-1alpha [Oryctolagus cuniculus] GI:1655930;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 862
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQSD-CPKCRSKIKSSRGYHA 373
T+C H+FC C+ TL+R CP CR + S Y+A
Sbjct: 629 TRCAHIFCRACILQTLQRSKPLCPLCRGSLTQSDLYNA 666
>At1g18660.4 68414.m02326 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 491
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQSDCPKCRSKI 349
T CGH FC +CL +++R + CP CR+ I
Sbjct: 209 TPCGHTFCRSCLFQSMDRGNKCPLCRTVI 237
>At1g18660.3 68414.m02329 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 486
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQSDCPKCRSKI 349
T CGH FC +CL +++R + CP CR+ I
Sbjct: 209 TPCGHTFCRSCLFQSMDRGNKCPLCRTVI 237
>At1g18660.2 68414.m02328 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 486
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQSDCPKCRSKI 349
T CGH FC +CL +++R + CP CR+ I
Sbjct: 209 TPCGHTFCRSCLFQSMDRGNKCPLCRTVI 237
>At1g18660.1 68414.m02327 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 486
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQSDCPKCRSKI 349
T CGH FC +CL +++R + CP CR+ I
Sbjct: 209 TPCGHTFCRSCLFQSMDRGNKCPLCRTVI 237
>At1g65040.2 68414.m07372 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 281
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
CGH+F CL++ LERQ+ CP CR+ +
Sbjct: 128 CGHLFHVHCLRSWLERQNTCPTCRALV 154
>At1g65040.1 68414.m07373 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 389
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
CGH+F CL++ LERQ+ CP CR+ +
Sbjct: 236 CGHLFHVHCLRSWLERQNTCPTCRALV 262
>At3g16090.1 68416.m02033 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 492
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
CGH+F CL++ LERQ CP CR+ +
Sbjct: 307 CGHLFHVHCLRSWLERQQTCPTCRALV 333
>At2g26350.1 68415.m03163 zinc-binding peroxisomal integral membrane
protein (PEX10) identical to zinc-binding peroxisomal
integral membrane protein GI:4337011 from [Arabidopsis
thaliana]
Length = 381
Score = 38.7 bits (86), Expect = 0.004
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 260 ATKCGHVFCATCLKTTLERQSDCPKCRS 343
AT CGHVFC +C+ + +CP CR+
Sbjct: 339 ATPCGHVFCWSCIMEWCNEKQECPLCRT 366
>At3g62690.1 68416.m07042 zinc finger (C3HC4-type RING finger)
family protein (ATL5) identical to RING-H2 zinc finger
protein ATL5 [Arabidopsis thaliana]
gi|4928401|gb|AAD33583
Length = 257
Score = 37.9 bits (84), Expect = 0.006
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSKIKSSR 361
KCGHVF C+ T +S CP CR+ ++ ++
Sbjct: 131 KCGHVFHVDCIDTWFRSRSSCPLCRAPVQPAQ 162
>At5g01960.1 68418.m00115 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 426
Score = 37.5 bits (83), Expect = 0.008
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSKIK 352
+C H+FC C+ ER+ CP CR+ +K
Sbjct: 379 RCKHMFCEDCVSEWFERERTCPLCRALVK 407
>At3g27330.1 68416.m03418 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles: PF00097 zinc
finger, C3HC4 type (RING finger), PF01697 Domain of
unknown function
Length = 913
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLER-QSDCPKCRSKIKSSR 361
T CGH FC CL++ ++ CPKCR I + R
Sbjct: 737 TTCGHSFCKKCLRSAADKCGRKCPKCRQLIGNGR 770
>At3g03550.1 68416.m00357 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger domain, C3HC4 type
(RING finger) 152633.
Length = 356
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSKIKSSRGYHAIYL 382
KC H F C+ T L+ S+CP CR+ I +S + L
Sbjct: 177 KCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDL 215
>At2g18670.1 68415.m02175 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 181
Score = 36.3 bits (80), Expect = 0.019
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIK 352
CGHVF C+ T L + S CP CR++++
Sbjct: 129 CGHVFHRKCVDTWLLKASTCPICRARVR 156
>At4g30400.1 68417.m04318 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 finger protein RHX1a
[Arabidopsis thaliana] GI:3790591; contains Pfam profile
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 472
Score = 35.9 bits (79), Expect = 0.026
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSKIKSSRGYH 370
KC H F C+ T L S CP CRS + S H
Sbjct: 152 KCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDLSSH 186
>At4g17910.1 68417.m02669 zinc finger (C3HC4-type RING finger) family
protein / pentatricopeptide (PPR) repeat-containing
protein contains Pfam domains PF01535: PPR repeat and
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 1208
Score = 35.9 bits (79), Expect = 0.026
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSKI 349
KC H F C+ L+ S+CP CR+KI
Sbjct: 1071 KCNHTFHVVCIDRWLKSHSNCPLCRAKI 1098
>At2g18650.1 68415.m02173 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 finger protein RHX1a
[Arabidopsis thaliana] GI:3790591; contains Pfam profile
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 423
Score = 35.9 bits (79), Expect = 0.026
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSKIKSSRGYH 370
KC H F C+ T L S CP CRS + S H
Sbjct: 144 KCSHAFHVECIDTWLLSHSTCPLCRSNLLSGFSSH 178
>At1g04020.2 68414.m00389 zinc finger (C3HC4-type RING finger)
family protein / BRCT domain-containing protein contains
Pfam domain, PF00533: BRCA1 C Terminus (BRCT) domain
Length = 713
Score = 35.9 bits (79), Expect = 0.026
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSK 346
C HVFC +C+ + + +S CP C+SK
Sbjct: 40 CDHVFCDSCVHKSSQVESGCPVCKSK 65
>At1g04020.1 68414.m00388 zinc finger (C3HC4-type RING finger)
family protein / BRCT domain-containing protein contains
Pfam domain, PF00533: BRCA1 C Terminus (BRCT) domain
Length = 714
Score = 35.9 bits (79), Expect = 0.026
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSK 346
C HVFC +C+ + + +S CP C+SK
Sbjct: 40 CDHVFCDSCVHKSSQVESGCPVCKSK 65
>At3g07120.1 68416.m00848 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 360
Score = 35.5 bits (78), Expect = 0.034
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQSDCPKCRS 343
T CGH FC C K + ++ CP C S
Sbjct: 325 TPCGHTFCKLCSKELMAQKGHCPVCSS 351
>At2g42350.1 68415.m05241 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 217
Score = 35.5 bits (78), Expect = 0.034
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSS 358
C HVF +C+ T L QS CP CR++ + S
Sbjct: 119 CKHVFHVSCVDTWLTTQSTCPVCRTEAEPS 148
>At4g09110.1 68417.m01503 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 302
Score = 35.1 bits (77), Expect = 0.045
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSSRG 364
C H F A C+ L QS CP CR+ + G
Sbjct: 142 CSHTFHANCIDVWLSSQSTCPACRANLSLKPG 173
>At1g19310.1 68414.m02401 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 226
Score = 35.1 bits (77), Expect = 0.045
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQS---DCPKCRSKIKSSR 361
T CGH+FC CL L S DCP C++ I+ R
Sbjct: 36 TLCGHLFCWPCLYKWLHLHSQSKDCPVCKAVIEEDR 71
>At2g47560.1 68415.m05935 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 227
Score = 34.7 bits (76), Expect = 0.059
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSKIK 352
KCGH F C+ T +S CP CR+ ++
Sbjct: 126 KCGHSFHVDCIDTWFRSRSTCPLCRAPVQ 154
>At4g12140.1 68417.m01928 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger proteins
RHG1a [Arabidopsis thaliana] GI:3822225, RHY1a
[Arabidopsis thaliana] GI:3790593; contains Pfam profile
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 202
Score = 34.3 bits (75), Expect = 0.078
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRS 343
C HVF ++CL L+R++ CP CR+
Sbjct: 173 CSHVFHSSCLVEWLKRKNTCPMCRT 197
>At1g51930.1 68414.m05854 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 132
Score = 34.3 bits (75), Expect = 0.078
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
CGHVF C+ + L ++ +CP CR +
Sbjct: 99 CGHVFHLLCIDSWLTQKQNCPSCRRSV 125
>At5g54990.1 68418.m06848 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 226
Score = 33.9 bits (74), Expect = 0.10
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSK 346
C HVF C+ T L++ CP CR+K
Sbjct: 192 CSHVFHRDCIMTWLKKNPSCPICRTK 217
>At5g17600.1 68418.m02064 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 362
Score = 33.9 bits (74), Expect = 0.10
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRS 343
KC H F C+ T L+ S+CP CR+
Sbjct: 160 KCNHAFHLPCIDTWLKSHSNCPLCRA 185
>At1g76410.1 68414.m08881 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 185
Score = 33.9 bits (74), Expect = 0.10
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSKIKSSR 361
+CGH F +C+ T L S CP CR + +R
Sbjct: 122 QCGHGFHVSCIDTWLGSHSSCPSCRQILVVTR 153
>At1g72220.1 68414.m08350 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger); similar to GI:4928397
from [Arabidopsis thaliana] (Plant Mol. Biol. 40 (4),
579-590 (1999))
Length = 413
Score = 33.9 bits (74), Expect = 0.10
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSKI 349
KC H F +C+ T L ++CP CR+ I
Sbjct: 195 KCNHAFHISCIDTWLSSHTNCPLCRAGI 222
>At1g18760.1 68414.m02339 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 224
Score = 33.9 bits (74), Expect = 0.10
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
CGH F C+ T E DCP CR K+
Sbjct: 193 CGHEFDDECVLTWFETNHDCPLCRFKL 219
>At5g05910.1 68418.m00653 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 151
Score = 33.5 bits (73), Expect = 0.14
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQSDCPKCRSKI 349
+KC H F C+ + L DCP CRS +
Sbjct: 114 SKCNHSFHMNCIFSWLRESQDCPICRSTV 142
>At5g05810.1 68418.m00639 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 353
Score = 33.5 bits (73), Expect = 0.14
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSKI 349
KC H F C+ T L+ S CP CR ++
Sbjct: 110 KCKHAFHVECVDTWLDAHSTCPLCRYRV 137
>At4g23450.1 68417.m03380 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 153
Score = 33.5 bits (73), Expect = 0.14
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQSDCPKCRSKI 349
TKCGH F C+ +ER CP C ++
Sbjct: 120 TKCGHDFHLACILAWMERSEACPVCDKEL 148
>At4g09120.1 68417.m01505 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 345
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSSRGYHAIYLD 385
C H F A C+ L S CP CR+ + G YL+
Sbjct: 142 CSHTFHANCIDVWLSSWSTCPVCRANLSLKPGESYPYLN 180
>At4g09100.1 68417.m01501 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 132
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
C HVF A C+ L S CP CR+K+
Sbjct: 104 CVHVFHADCVDIWLSHSSTCPICRAKV 130
>At4g05350.1 68417.m00817 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHG1a [Arabidopsis thaliana] GI:3822225; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 206
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
C HVF CL L+R++ CP CR++I
Sbjct: 178 CSHVFHNGCLLEWLKRKNTCPLCRTEI 204
>At3g23280.2 68416.m02935 zinc finger (C3HC4-type RING finger)
family protein / ankyrin repeat family protein contains
Pfam profile: PF00097 zinc finger, C3HC4 type (RING
finger) and Pfam profile: PF00023 ankyrin repeat
Length = 438
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 269 CGHVF-CATCLKTTLERQSDCPKCRSKI 349
CGHV C +CLK + CP CR+KI
Sbjct: 402 CGHVAGCMSCLKEIKSKNWGCPVCRAKI 429
>At3g23280.1 68416.m02934 zinc finger (C3HC4-type RING finger)
family protein / ankyrin repeat family protein contains
Pfam profile: PF00097 zinc finger, C3HC4 type (RING
finger) and Pfam profile: PF00023 ankyrin repeat
Length = 462
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 269 CGHVF-CATCLKTTLERQSDCPKCRSKI 349
CGHV C +CLK + CP CR+KI
Sbjct: 426 CGHVAGCMSCLKEIKSKNWGCPVCRAKI 453
>At2g44950.1 68415.m05596 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 878
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +2
Query: 263 TKCGHVFCATCL-KTTLERQSDCPKC 337
TKC H+FC C+ K T RQ CP C
Sbjct: 839 TKCYHLFCNPCVQKLTGTRQKKCPTC 864
>At1g35330.1 68414.m04379 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 327
Score = 33.5 bits (73), Expect = 0.14
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSSRG 364
C H F A+C+ L +S CP CR+ + G
Sbjct: 147 CSHAFHASCIDVWLSSRSTCPVCRASLPPKPG 178
>At1g20823.1 68414.m02608 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 197
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSKIKSSR 361
+CGH F C+ T L S CP CR + +R
Sbjct: 129 QCGHGFHVACIDTWLGSHSSCPSCRQILVVAR 160
>At4g30370.1 68417.m04315 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 176
Score = 33.1 bits (72), Expect = 0.18
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSKI 349
+CGHVF C+ L + S CP CR ++
Sbjct: 133 RCGHVFHRKCVDLWLIKVSTCPICRDRV 160
>At4g09130.1 68417.m01507 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 357
Score = 33.1 bits (72), Expect = 0.18
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSSRG 364
C H F A C+ L +S CP CR+ + G
Sbjct: 139 CSHTFHANCIDEWLSSRSTCPVCRANLSLKSG 170
>At2g44580.1 68415.m05548 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 624
Score = 33.1 bits (72), Expect = 0.18
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
C H F C+ LE++S CP CR++I
Sbjct: 568 CSHCFHVDCIDPWLEKKSMCPLCRAEI 594
Score = 32.7 bits (71), Expect = 0.24
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQSDCPKCRSKI 349
T C H F C+ L ++S CP CR++I
Sbjct: 415 TACSHCFHVDCIDPWLMKKSTCPLCRAEI 443
>At2g27940.1 68415.m03387 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 237
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRS 343
CGHVF C+ T L CP CRS
Sbjct: 159 CGHVFHVDCVDTWLSSYVTCPLCRS 183
>At5g41430.1 68418.m05032 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 161
Score = 32.7 bits (71), Expect = 0.24
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCR 340
KC HVF +C+ + L++ CP CR
Sbjct: 135 KCRHVFHRSCIDSWLKQNRSCPNCR 159
>At4g12190.1 68417.m01936 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 71
Score = 32.7 bits (71), Expect = 0.24
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
C HVF CL L+R++ CP CR+++
Sbjct: 43 CSHVFHNGCLLEWLKRKNTCPLCRTEL 69
>At3g05670.1 68416.m00631 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 883
Score = 32.7 bits (71), Expect = 0.24
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKS 355
C H FC TC+ + +S CP C+ + ++
Sbjct: 432 CSHYFCFTCIMEWSKVESRCPLCKQRFRT 460
>At2g38185.4 68415.m04692 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 872
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 269 CGH-VFCATCLKTTLERQSDCPKCRSKIKSSRGYHAIY 379
CGH V C C T E CP CR K+K + + ++
Sbjct: 406 CGHSVSCYECGTTMQEADGSCPICRRKMKKVKRIYTVW 443
>At2g23780.1 68415.m02840 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 227
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQS---DCPKCRSKIKSSR 361
T CGH+FC CL L S +CP C++ ++ +
Sbjct: 41 TLCGHLFCWPCLYRWLHHHSHSQECPVCKAVVQDDK 76
>At2g20030.1 68415.m02341 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 zinc finger protein
ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 390
Score = 32.7 bits (71), Expect = 0.24
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSKI 349
KC H F C+ LE+ + CP CR+++
Sbjct: 142 KCRHAFHIGCIDQWLEQHATCPLCRNRV 169
>At1g54150.1 68414.m06173 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 383
Score = 32.7 bits (71), Expect = 0.24
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSSRGYHAIY 379
CGHV C +T+ER+ + PKC ++S RG +Y
Sbjct: 346 CGHVVCCRRCASTVERELN-PKCPVCLQSIRGSMRVY 381
>At5g57750.1 68418.m07219 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 zinc finger protein
ATL4 [Arabidopsis thaliana] GI:4928399; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 210
Score = 32.3 bits (70), Expect = 0.32
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSKI 349
KC H F C+ T L S CP CR +
Sbjct: 140 KCSHAFHVECIDTWLLTNSTCPLCRDNL 167
>At5g43420.1 68418.m05309 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 zinc finger
protein ATL4 [Arabidopsis thaliana] GI:4928399; contains
Pfam profile PF00097: Zinc finger, C3HC4 type (RING
finger)
Length = 375
Score = 32.3 bits (70), Expect = 0.32
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSSRGY 367
C H+F C+ L+ ++CP CR+++ +
Sbjct: 157 CSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSF 189
>At5g40250.1 68418.m04883 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 finger protein RHX1a
[Arabidopsis thaliana] GI:3790591; contains Pfam profile
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 376
Score = 32.3 bits (70), Expect = 0.32
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKS 355
C H F C+ T L+ S CP CR + S
Sbjct: 162 CSHAFHLNCIDTWLQSNSTCPLCRGTLFS 190
>At5g10380.1 68418.m01204 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 301
Score = 32.3 bits (70), Expect = 0.32
Identities = 13/48 (27%), Positives = 19/48 (39%)
Frame = +2
Query: 206 TQCNXXXXXXXXXXXXXXATKCGHVFCATCLKTTLERQSDCPKCRSKI 349
T+C+ KC H F C+ T L +CP CR+ +
Sbjct: 133 TECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPV 180
>At4g35480.1 68417.m05042 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 200
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRS---KIKSSR-GYHAIYLDT 388
C H F C+ L +S CP CR +K R G+HA +T
Sbjct: 132 CSHAFHVACIDKWLTSRSSCPSCRRILVPVKCDRCGHHASTAET 175
>At4g33565.1 68417.m04770 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 204
Score = 32.3 bits (70), Expect = 0.32
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSKI 349
KC H F C+ T L ++CP CR+ I
Sbjct: 72 KCKHAFHLYCIDTWLRSHTNCPLCRAPI 99
>At4g28890.1 68417.m04129 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 386
Score = 32.3 bits (70), Expect = 0.32
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSKI 349
KC H F C+ LE+ + CP CR ++
Sbjct: 95 KCRHAFHIGCIDQWLEQHATCPLCRDRV 122
>At4g21070.1 68417.m03047 BRCT domain-containing protein / zinc
finger (C3HC4-type RING finger) family protein (BRCA1)
contains Pfam profiles PF00533: BRCA1 C Terminus (BRCT)
domain, PF00097: Zinc finger, C3HC4 type (RING finger),
PF01535: PPR repeat; identical to cDNA BRCA1 GI:28372473
Length = 1276
Score = 32.3 bits (70), Expect = 0.32
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCR 340
C HVFC C+ +++ + CP C+
Sbjct: 366 CNHVFCNACIVKSMKMDATCPVCK 389
>At4g14365.1 68417.m02213 zinc finger (C3HC4-type RING finger)
family protein / ankyrin repeat family protein contains
Pfam profile: PF00097 zinc finger, C3HC4 type (RING
finger) and Pfam profile: PF00023 ankyrin repeat
Length = 376
Score = 32.3 bits (70), Expect = 0.32
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 269 CGHVF-CATCLKTTLERQSDCPKCRSKI 349
CGHV C +CLK ++ CP CR+ I
Sbjct: 340 CGHVAGCISCLKEIENKKMGCPVCRANI 367
>At3g10910.1 68416.m01313 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 181
Score = 32.3 bits (70), Expect = 0.32
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSKI 349
KC H F C+ T L +S CP CR +
Sbjct: 132 KCNHGFHVRCIDTWLLSRSSCPTCRQSL 159
>At2g42030.1 68415.m05198 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 425
Score = 32.3 bits (70), Expect = 0.32
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLE--RQSDCPKCRSKI 349
T CGH++C +CL L+ +CP C+ ++
Sbjct: 154 TNCGHLYCWSCLYQWLQVSEAKECPVCKGEV 184
>At2g40830.3 68415.m05041 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 328
Score = 32.3 bits (70), Expect = 0.32
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSSRG 364
C H++ + C+ L + + CP CR ++ S+ G
Sbjct: 208 CNHIYHSDCIVPWLVQHNSCPVCRQELPSASG 239
>At2g40830.2 68415.m05040 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 328
Score = 32.3 bits (70), Expect = 0.32
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSSRG 364
C H++ + C+ L + + CP CR ++ S+ G
Sbjct: 208 CNHIYHSDCIVPWLVQHNSCPVCRQELPSASG 239
>At2g40830.1 68415.m05039 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 328
Score = 32.3 bits (70), Expect = 0.32
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSSRG 364
C H++ + C+ L + + CP CR ++ S+ G
Sbjct: 208 CNHIYHSDCIVPWLVQHNSCPVCRQELPSASG 239
>At5g58580.1 68418.m07341 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 308
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
CGH F C+ L S CP CRS +
Sbjct: 157 CGHGFHVECIDMWLSSHSTCPLCRSPV 183
>At5g47610.1 68418.m05876 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 166
Score = 31.9 bits (69), Expect = 0.42
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSKIKS 355
KC H F C+ L +S CP CR+ I S
Sbjct: 125 KCQHGFHVKCIHKWLSTRSSCPTCRTSIFS 154
>At5g15790.2 68418.m01847 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 232
Score = 31.9 bits (69), Expect = 0.42
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQSDCPKC 337
TKC H F +C+ +ER +CP C
Sbjct: 198 TKCSHHFHLSCIYEWMERSENCPVC 222
>At5g15790.1 68418.m01846 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 232
Score = 31.9 bits (69), Expect = 0.42
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQSDCPKC 337
TKC H F +C+ +ER +CP C
Sbjct: 198 TKCSHHFHLSCIYEWMERSENCPVC 222
>At5g13530.1 68418.m01562 protein kinase family protein / ankyrin
repeat family protein contains similarity to
ankyrin-related gene UNC-44 gi|790608|gb|AAA85854;
contains Pfam domains PF00023: Ankyrin repeat and
PF00069: Protein kinase domain
Length = 834
Score = 31.9 bits (69), Expect = 0.42
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 4/29 (13%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSD----CPKCR 340
+CGH FC CL SD CP+CR
Sbjct: 28 QCGHGFCKDCLSKMFSTSSDTTLTCPRCR 56
>At5g05280.1 68418.m00567 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 176
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSKI 349
KC H F C+ T L S CP CR +
Sbjct: 131 KCNHGFHVKCIDTWLLSHSSCPTCRQSL 158
>At4g13100.2 68417.m02042 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 265
Score = 31.9 bits (69), Expect = 0.42
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
CGH FC C + ++ +CP C + I
Sbjct: 232 CGHTFCRLCSRELWVQRGNCPLCNTAI 258
>At4g13100.1 68417.m02041 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 304
Score = 31.9 bits (69), Expect = 0.42
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
CGH FC C + ++ +CP C + I
Sbjct: 271 CGHTFCRLCSRELWVQRGNCPLCNTAI 297
>At3g25030.1 68416.m03128 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 250
Score = 31.9 bits (69), Expect = 0.42
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
CGH FC C + ++ +CP C + I
Sbjct: 217 CGHTFCRLCSRELWVQRGNCPLCNTTI 243
>At3g05200.1 68416.m00567 zinc finger (C3HC4-type RING finger)
family protein (ATL6) contains Pfam profile: PF00097:
Zinc finger, C3HC4 type (RING finger)
Length = 398
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSKI 349
KC HVF C+ LE CP CR+ +
Sbjct: 146 KCDHVFHPHCIDAWLEAHVTCPVCRANL 173
>At3g02290.2 68416.m00211 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger motif, C3HC4 type
(RING finger)
Length = 231
Score = 31.9 bits (69), Expect = 0.42
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQSDCPKC 337
TKC H F +C+ +ER +CP C
Sbjct: 197 TKCSHHFHLSCIYEWMERSENCPVC 221
>At3g02290.1 68416.m00210 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger motif, C3HC4 type
(RING finger)
Length = 231
Score = 31.9 bits (69), Expect = 0.42
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQSDCPKC 337
TKC H F +C+ +ER +CP C
Sbjct: 197 TKCSHHFHLSCIYEWMERSENCPVC 221
>At2g38185.3 68415.m04691 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 346
Score = 31.9 bits (69), Expect = 0.42
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +2
Query: 269 CGH-VFCATCLKTTLERQSDCPKCRSKIKSSRGYHAI 376
CGH V C C T E CP CR K+K + + +
Sbjct: 310 CGHSVSCYECGTTMQEADGSCPICRRKMKKVKRIYTV 346
>At2g38185.2 68415.m04690 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 441
Score = 31.9 bits (69), Expect = 0.42
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +2
Query: 269 CGH-VFCATCLKTTLERQSDCPKCRSKIKSSRGYHAI 376
CGH V C C T E CP CR K+K + + +
Sbjct: 405 CGHSVSCYECGTTMQEADGSCPICRRKMKKVKRIYTV 441
>At2g38185.1 68415.m04689 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 441
Score = 31.9 bits (69), Expect = 0.42
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +2
Query: 269 CGH-VFCATCLKTTLERQSDCPKCRSKIKSSRGYHAI 376
CGH V C C T E CP CR K+K + + +
Sbjct: 405 CGHSVSCYECGTTMQEADGSCPICRRKMKKVKRIYTV 441
>At1g74990.1 68414.m08705 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 137
Score = 31.9 bits (69), Expect = 0.42
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTL---ERQSDCPKCRSKIK 352
T CGH+FC CL L + + CP C++ +K
Sbjct: 32 TLCGHLFCWPCLYKWLHYHSKSNHCPVCKALVK 64
>At1g74410.1 68414.m08620 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 223
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSKIK 352
KC H F C+ L R CP CR +K
Sbjct: 194 KCDHTFHLVCVDKWLIRHGSCPICRQAVK 222
>At1g55255.1 68414.m06311 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 383
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLE-RQSDCPKC 337
KC H+FC C++ +LE R CP C
Sbjct: 345 KCYHLFCQQCIQRSLEIRHRKCPGC 369
>At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 396
Score = 31.5 bits (68), Expect = 0.55
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSS 358
C H F C+ LE S CP CR ++ SS
Sbjct: 277 CKHKFHVRCIVPWLELHSSCPVCRFELPSS 306
>At4g00335.2 68417.m00044 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 190
Score = 31.5 bits (68), Expect = 0.55
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQSDCPKCRSKI 349
TKC H F +CL +ER CP C ++
Sbjct: 155 TKCEHEFHLSCLLEWIERSDRCPICDKEV 183
>At4g00335.1 68417.m00043 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 190
Score = 31.5 bits (68), Expect = 0.55
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQSDCPKCRSKI 349
TKC H F +CL +ER CP C ++
Sbjct: 155 TKCEHEFHLSCLLEWIERSDRCPICDKEV 183
>At2g42360.1 68415.m05242 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 236
Score = 31.5 bits (68), Expect = 0.55
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIK 352
C H+F C+ T L S CP CR++++
Sbjct: 127 CKHIFHVDCVDTWLTTCSTCPVCRTEVE 154
>At2g35000.1 68415.m04294 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 378
Score = 31.5 bits (68), Expect = 0.55
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
C HVF A C+ L S CP CR+ +
Sbjct: 154 CCHVFHADCVDVWLSEHSTCPLCRADL 180
>At2g29840.1 68415.m03624 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 310
Score = 31.5 bits (68), Expect = 0.55
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +2
Query: 260 ATKCGHVFCATCLKTTLERQSDCPKCRSKI 349
A CGH F C E DCP CR K+
Sbjct: 276 ALPCGHEFDDECALKWFETNHDCPLCRFKL 305
>At1g49220.1 68414.m05518 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 251
Score = 31.5 bits (68), Expect = 0.55
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRS 343
KC H F C+ L++ CPKCR+
Sbjct: 153 KCNHGFHVRCIDKWLQQHLTCPKCRN 178
>At1g17970.1 68414.m02223 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 368
Score = 31.5 bits (68), Expect = 0.55
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCR 340
CGH F C+K L R++ CP C+
Sbjct: 338 CGHSFHVHCVKQWLSRKNACPVCK 361
>At5g42940.1 68418.m05235 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 691
Score = 31.1 bits (67), Expect = 0.73
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRS 343
+CGH F + C+K L++++ CP C++
Sbjct: 654 ECGHEFHSQCIKEWLKQKNLCPICKT 679
>At5g38895.1 68418.m04704 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 221
Score = 31.1 bits (67), Expect = 0.73
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQSDCPKC 337
TKC H F +C+ +ER CP C
Sbjct: 185 TKCSHHFHLSCIYEWMERSETCPVC 209
>At5g20910.1 68418.m02483 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 310
Score = 31.1 bits (67), Expect = 0.73
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
C H F CLK L+ + CP CR ++
Sbjct: 248 CKHTFHPPCLKPWLDEHNSCPICRHEL 274
>At5g01880.1 68418.m00107 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 159
Score = 31.1 bits (67), Expect = 0.73
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
C H F +C+ T L S CP CR +
Sbjct: 124 CNHSFHMSCIDTWLVSHSSCPNCRHSL 150
>At5g01520.1 68418.m00067 zinc finger (C3HC4-type RING finger)
family protein similar to MTD2 [Medicago truncatula]
GI:9294812; contains Pfam profile PF00097: Zinc finger,
C3HC4 type (RING finger)
Length = 242
Score = 31.1 bits (67), Expect = 0.73
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIK 352
C H C C + R CP CR +K
Sbjct: 161 CNHSMCINCYRNWRARSQSCPFCRGSLK 188
>At3g48030.1 68416.m05236 hypoxia-responsive family protein / zinc
finger (C3HC4-type RING finger) family protein similar
to RING-H2 finger protein RHX1a [Arabidopsis thaliana]
GI:3790591; contains Pfam profiles PF00097: Zinc finger
C3HC4 type (RING finger), PF04588: Hypoxia induced
protein conserved region
Length = 349
Score = 31.1 bits (67), Expect = 0.73
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSS 358
C H F C+ T L S CP CR + +S
Sbjct: 226 CSHAFHLHCIDTWLLSNSTCPLCRRSLSTS 255
>At3g16720.1 68416.m02135 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 304
Score = 31.1 bits (67), Expect = 0.73
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSSRG 364
C H F C+ S CP CRS ++S G
Sbjct: 138 CQHTFHVDCIDMWFHSHSTCPLCRSLVESLAG 169
>At3g16600.1 68416.m02122 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to SP|P31244 DNA
repair protein RAD16 {Saccharomyces cerevisiae};
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 638
Score = 31.1 bits (67), Expect = 0.73
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQSD-CP--KCRSKIK 352
T CGHVFC C+ + ++ CP C S++K
Sbjct: 408 TLCGHVFCYECVSVNINGDNNTCPALNCHSQLK 440
>At2g37580.1 68415.m04610 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 235
Score = 31.1 bits (67), Expect = 0.73
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQSDCPKCRSKI 349
++C H F C++T L+ +CP CR+ +
Sbjct: 159 SECKHAFHVLCIETWLKDHPNCPICRTDV 187
>At2g20650.2 68415.m02422 zinc finger (C3HC4-type RING finger)
family protein
Length = 559
Score = 31.1 bits (67), Expect = 0.73
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQSDCPKCR 340
T C H+F + CL+ ++ + +CP CR
Sbjct: 528 TPCEHIFHSGCLQRWMDIKMECPTCR 553
>At2g20650.1 68415.m02421 zinc finger (C3HC4-type RING finger)
family protein
Length = 559
Score = 31.1 bits (67), Expect = 0.73
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQSDCPKCR 340
T C H+F + CL+ ++ + +CP CR
Sbjct: 528 TPCEHIFHSGCLQRWMDIKMECPTCR 553
>At1g77830.1 68414.m09068 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 185
Score = 31.1 bits (67), Expect = 0.73
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQSDCPKC 337
TKC H+F TC+ L CP C
Sbjct: 146 TKCNHIFYGTCISRYLLHTPRCPVC 170
>At1g72200.1 68414.m08348 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 404
Score = 31.1 bits (67), Expect = 0.73
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSKIKSSRGYHAIYLDTSSF*NTP 409
KC HVF C+ L + CP CR+ + G + + N P
Sbjct: 162 KCCHVFHPGCIDAWLRSHTTCPLCRADLIPVPGESIVSIQIPGLVNDP 209
>At5g46650.1 68418.m05748 zinc finger (C3HC4-type RING finger)
family protein contains similarity to RING-H2 zinc
finger protein ATL6 [Arabidopsis thaliana] GI:4928403;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 289
Score = 30.7 bits (66), Expect = 0.96
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQSDCPKCRSKI 349
T C HVF C+ LE CP CR +
Sbjct: 132 TTCYHVFHQECIDQWLESNKTCPVCRRNL 160
>At4g15975.1 68417.m02425 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 235
Score = 30.7 bits (66), Expect = 0.96
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSSRG 364
C H F C+ S CP CRS+I+ G
Sbjct: 95 CKHTFHVHCIDMWFHSHSSCPLCRSQIEPFAG 126
>At4g03510.2 68417.m00479 zinc finger (C3HC4-type RING finger)
family protein (RMA1) identical to RING zinc finger
protein RMA1 gi:3164222
Length = 249
Score = 30.7 bits (66), Expect = 0.96
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 11/43 (25%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQS-----------DCPKCRSKIKSS 358
T CGH+FC C+ L+ QS CP C+SK+ S
Sbjct: 61 TLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVSHS 103
>At4g03510.1 68417.m00478 zinc finger (C3HC4-type RING finger)
family protein (RMA1) identical to RING zinc finger
protein RMA1 gi:3164222
Length = 249
Score = 30.7 bits (66), Expect = 0.96
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 11/43 (25%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQS-----------DCPKCRSKIKSS 358
T CGH+FC C+ L+ QS CP C+SK+ S
Sbjct: 61 TLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVSHS 103
>At3g58030.3 68416.m06469 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 436
Score = 30.7 bits (66), Expect = 0.96
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLE--RQSDCPKCRSKIKS 355
T CGH++C CL L+ +CP C+ ++ S
Sbjct: 152 TCCGHLYCWPCLYQWLQISDAKECPVCKGEVTS 184
>At3g58030.2 68416.m06468 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 436
Score = 30.7 bits (66), Expect = 0.96
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLE--RQSDCPKCRSKIKS 355
T CGH++C CL L+ +CP C+ ++ S
Sbjct: 152 TCCGHLYCWPCLYQWLQISDAKECPVCKGEVTS 184
>At3g58030.1 68416.m06467 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 436
Score = 30.7 bits (66), Expect = 0.96
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLE--RQSDCPKCRSKIKS 355
T CGH++C CL L+ +CP C+ ++ S
Sbjct: 152 TCCGHLYCWPCLYQWLQISDAKECPVCKGEVTS 184
>At3g54360.1 68416.m06008 expressed protein DNA-binding Mel-18
protein, Homo sapiens, PIR:JN0717
Length = 405
Score = 30.7 bits (66), Expect = 0.96
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKS 355
C HVFC C L R DCP C + I+S
Sbjct: 124 CTHVFCKVC----LTRFKDCPLCGADIES 148
>At2g34990.1 68415.m04293 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 302
Score = 30.7 bits (66), Expect = 0.96
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCR 340
+C HVF A C+ L S CP CR
Sbjct: 114 ECCHVFHADCVSVWLSDHSTCPLCR 138
>At2g17450.1 68415.m02014 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 185
Score = 30.7 bits (66), Expect = 0.96
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCR 340
CGH F C+ L +S CP CR
Sbjct: 121 CGHSFHVECIDKWLVSRSSCPSCR 144
>At2g04240.2 68415.m00413 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 162
Score = 30.7 bits (66), Expect = 0.96
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQS-DCPKCRSKI 349
KCGH+F TCL+ ++ + CP CR+ +
Sbjct: 120 KCGHLFHKTCLEKWIDYWNITCPLCRTPL 148
>At2g04240.1 68415.m00412 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 162
Score = 30.7 bits (66), Expect = 0.96
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQS-DCPKCRSKI 349
KCGH+F TCL+ ++ + CP CR+ +
Sbjct: 120 KCGHLFHKTCLEKWIDYWNITCPLCRTPL 148
>At1g49210.1 68414.m05517 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 225
Score = 30.7 bits (66), Expect = 0.96
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCR 340
KC H F C+ L+ CPKCR
Sbjct: 153 KCNHGFHVRCIDKWLQHHLTCPKCR 177
>At1g45180.1 68414.m05180 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 645
Score = 30.7 bits (66), Expect = 0.96
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRS 343
+CGH F + C+K L++++ CP C++
Sbjct: 609 ECGHDFHSQCIKEWLKQKNLCPICKT 634
>At1g22500.1 68414.m02811 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 381
Score = 30.7 bits (66), Expect = 0.96
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSKI 349
+C HVF C+ L Q+ CP CR+ +
Sbjct: 136 QCCHVFHPGCIDAWLRSQTTCPLCRANL 163
>At5g37270.1 68418.m04477 zinc finger (C3HC4-type RING finger)
family protein ow similarity to RING-H2 finger protein
RHA3b [gi:3790575], RHA1a [gi:3790554]; contains Pfam
domain zinc finger, C3HC4 type (RING finger) PF00097
Length = 208
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCR 340
C H+F +C+ L+RQ CP CR
Sbjct: 174 CFHLFHQSCIFEWLKRQRSCPLCR 197
>At5g37230.1 68418.m04472 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHA3b, Arabidopsis thaliana, PIR:T41745 [gi:3790575];
contains Pfam domain zinc finger, C3HC4 type (RING
finger) PF00097
Length = 208
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCR 340
C H+F +C+ L+RQ CP CR
Sbjct: 174 CFHLFHQSCIFKWLKRQRSCPLCR 197
>At5g27420.1 68418.m03273 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 zinc finger protein
ATL6 [Arabidopsis thaliana]
gi|4928403|gb|AAD33584.1|AF132016_1[4928403]; contains
Pfam domain, PF00097: Zinc finger, C3HC4 type (RING
finger)
Length = 368
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSKIKSSRGYHAIYLDT 388
KC HVF C+ L+ CP CR+ + + ++T
Sbjct: 142 KCDHVFHPHCIGAWLQGHVTCPVCRTNLAEQTPEPEVVVET 182
>At4g22250.1 68417.m03219 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 214
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
CGH FC C + + CP C I
Sbjct: 181 CGHTFCRVCSRELWLNRGSCPLCNRPI 207
>At4g12210.1 68417.m01938 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHG1a [Arabidopsis thaliana] GI:3822225; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 203
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
C HVF CL R++ CP CR+++
Sbjct: 174 CSHVFHNPCLLEWFMRKNTCPLCRTEL 200
>At4g10160.1 68417.m01662 zinc finger (C3HC4-type RING finger)
family protein zinc finger protein, Arabidopsis
thaliana, gb:L76926
Length = 225
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/45 (28%), Positives = 16/45 (35%)
Frame = +2
Query: 206 TQCNXXXXXXXXXXXXXXATKCGHVFCATCLKTTLERQSDCPKCR 340
TQC+ CGH F C+ L + CP CR
Sbjct: 95 TQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCR 139
>At3g19950.1 68416.m02525 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 328
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
C HVF CL LE + CP CR ++
Sbjct: 234 CKHVFHQDCLLPWLELHNSCPVCRFEL 260
>At3g14320.1 68416.m01811 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 204
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI--KSSR 361
C H F C+ + L+ S CP CR ++ K SR
Sbjct: 107 CDHWFHVECIDSWLQSNSTCPICRKRVCLKQSR 139
>At2g37150.2 68415.m04558 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 546
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRS 343
CGH + C+K L ++ CP C+S
Sbjct: 511 CGHDYHGRCIKKWLSMKNSCPICKS 535
>At2g37150.1 68415.m04557 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 546
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRS 343
CGH + C+K L ++ CP C+S
Sbjct: 511 CGHDYHGRCIKKWLSMKNSCPICKS 535
>At1g73760.1 68414.m08540 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 367
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRS 343
+CGH F C+ L R++ CP C++
Sbjct: 336 RCGHRFHIDCVNQWLVRKNSCPVCKT 361
>At1g49200.1 68414.m05516 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 226
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCR 340
KC H F C+ L++ CPKCR
Sbjct: 154 KCHHGFHVRCIDKWLQQHLTCPKCR 178
>At1g23980.1 68414.m03028 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 zinc finger
protein ATL4 [Arabidopsis thaliana] GI:4928399; contains
Pfam profile PF00097: Zinc finger, C3HC4 type (RING
finger)
Length = 369
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSSRGYHAIYLD 385
C H F C+ T L S CP CR + S G+ Y D
Sbjct: 163 CSHAFHIDCIDTWLLSNSTCPLCRGTL-FSLGHQFEYPD 200
>At1g04360.1 68414.m00426 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 381
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSSRGY 367
C HVF C+ L+ ++CP CR+ + +
Sbjct: 153 CCHVFHIDCIDIWLQGNANCPLCRTSVSCEASF 185
>At5g41440.1 68418.m05033 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 124
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSKI 349
KC HVF C+ + ++ +CP CR +
Sbjct: 96 KCRHVFHRFCMLSWIDANRNCPICRCSV 123
>At5g37250.1 68418.m04475 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHA3b [gi:3790575], RHA3a [gi:3790573]; contains Pfam
domain zinc finger, C3HC4 type (RING finger) PF00097
Length = 192
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCR 340
C H+F C+ L+RQ CP CR
Sbjct: 158 CFHLFHQNCIFEWLKRQRSCPLCR 181
>At5g05530.1 68418.m00600 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 199
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKS 355
C HVF CL + +S CP CR I S
Sbjct: 167 CCHVFHKLCLWRWIRTKSSCPLCRHPIYS 195
>At4g28370.1 68417.m04061 zinc finger (C3HC4-type RING finger)
family protein contains Pfam PF00097: Zinc finger, C3HC4
type (RING finger)
Length = 466
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQSDCPKCRSKI 349
T C H F + CL+ ++ + +CP CR +
Sbjct: 435 TPCEHFFHSGCLQRWMDIKMECPTCRRSL 463
>At4g24015.1 68417.m03451 zinc finger (RING-H2 type) protein-related
low similarity to RING-H2 zinc finger protein ATL4
[Arabidopsis thaliana] GI:4928399
Length = 174
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSS 358
C H+F C+ L + CP CRS + S
Sbjct: 124 CKHIFHLDCIHLWLYSHNTCPLCRSSVSIS 153
>At3g18930.2 68416.m02403 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 411
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSSRG 364
C H F C+ L +CP CR+ I S G
Sbjct: 175 CFHAFHLECIDEWLRSHPNCPLCRTAILGSAG 206
>At3g18930.1 68416.m02402 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 411
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSSRG 364
C H F C+ L +CP CR+ I S G
Sbjct: 175 CFHAFHLECIDEWLRSHPNCPLCRTAILGSAG 206
>At3g18773.1 68416.m02383 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 220
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCR 340
KC H F C+ L + CPKCR
Sbjct: 148 KCNHGFHLRCIDKWLTQHMTCPKCR 172
>At2g25410.1 68415.m03043 hypothetical protein
Length = 377
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRS 343
+C H F C+ L+ S CP CRS
Sbjct: 345 ECEHCFHTECIDAWLKLHSSCPVCRS 370
>At1g55530.1 68414.m06353 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 351
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
C H F + CL LE S CP CR ++
Sbjct: 241 CTHKFHSDCLLPWLELHSSCPVCRYQL 267
>At1g53010.1 68414.m06001 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 178
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSS 358
C H++ A C+ L+ CP CR + S
Sbjct: 149 CRHIYHALCIDAWLKNHLTCPTCRKDLPES 178
>At1g50410.1 68414.m05650 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to transcription
factor RUSH-1alpha [Oryctolagus cuniculus] GI:1655930;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 981
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQSD---CPKCRSKI 349
T CGH+FC C+ + D P+CR ++
Sbjct: 692 TLCGHIFCYQCVSDYITGDEDTCPAPRCREQL 723
>At3g13430.1 68416.m01688 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 315
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCR 340
C H F + CL LE S CP CR
Sbjct: 243 CKHKFHSDCLLPWLELHSSCPVCR 266
>At3g11110.1 68416.m01345 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 158
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIK 352
C H + C+ L+ +S CP CR I+
Sbjct: 126 CSHCYHCECVDRWLKTESSCPLCRVSIR 153
>At3g10815.1 68416.m01302 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 199
Score = 29.5 bits (63), Expect = 2.2
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSSR 361
C H++ + C+ L +++ CP CR ++ R
Sbjct: 139 CKHIYHSECILPWLVQRNTCPVCRKELPQDR 169
>At2g01735.1 68415.m00102 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger) domain
Length = 359
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 260 ATKCGHVFCATCLKTTLERQSDCPKCRSKI 349
A C H F +TC+ L+ ++ CP C+ I
Sbjct: 322 ALPCNHHFHSTCIVKWLKMRATCPLCKYNI 351
>At1g80400.1 68414.m09412 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|Q90972 RING finger
protein 13 {Gallus gallus}; contains Pfam profile:
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 407
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSS 358
C HVF C+ L+ + CP C++++ S
Sbjct: 373 CSHVFHVDCVDKWLKINATCPLCKNEVGES 402
>At1g72310.1 68414.m08359 zinc finger (C3HC4-type RING finger)
family protein (ATL3) identical to RING-H2 zinc finger
protein (ATL3) GB:AF132013 (Arabidopsis thaliana)
Length = 324
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSKI 349
KC H F C+ + S CP CR+ +
Sbjct: 145 KCNHSFHVECIDMWFQSHSTCPICRNTV 172
>At1g62370.1 68414.m07037 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 204
Score = 29.5 bits (63), Expect = 2.2
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
CGH +C C + + CP C I
Sbjct: 171 CGHTYCRVCSREIWMNRGTCPLCNRSI 197
>At1g49850.1 68414.m05589 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 250
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
C H F ++CL L DCP CR I
Sbjct: 221 CTHSFHSSCLNPWLRACGDCPCCRRAI 247
>At1g24440.1 68414.m03079 expressed protein similar to MTD2
[Medicago truncatula] GI:9294812
Length = 251
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIK 352
C H C C + + CP CR IK
Sbjct: 170 CCHAMCIKCYRNWNTKSESCPFCRGSIK 197
>At5g66070.1 68418.m08324 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 221
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCR 340
C H+F C+ L R + CP CR
Sbjct: 195 CHHMFHLPCIDKWLRRHASCPLCR 218
>At5g58787.1 68418.m07365 zinc finger (C3HC4-type RING finger)
family protein similar to MTD2 [Medicago truncatula]
GI:9294812; contains Pfam profile PF00097: Zinc finger,
C3HC4 type (RING finger)
Length = 242
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIK 352
C H C C + R CP CR +K
Sbjct: 159 CTHSLCIKCYRDWRGRSQSCPFCRDSLK 186
>At5g41350.1 68418.m05025 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 212
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSKI 349
KC H F C+ +ER CP C ++
Sbjct: 178 KCDHHFHLACILEWMERSETCPVCNKEM 205
>At4g03000.2 68417.m00408 expressed protein contains similarity to
hypothetical proteins
Length = 814
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 269 CGH-VFCATCLKT-TLERQSDCPKCRSKIK 352
C H V C+ C + E DCP CR+KI+
Sbjct: 775 CAHQVLCSKCNQLHEKEAMEDCPSCRAKIQ 804
>At4g03000.1 68417.m00407 expressed protein contains similarity to
hypothetical proteins
Length = 814
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 269 CGH-VFCATCLKT-TLERQSDCPKCRSKIK 352
C H V C+ C + E DCP CR+KI+
Sbjct: 775 CAHQVLCSKCNQLHEKEAMEDCPSCRAKIQ 804
>At3g60220.1 68416.m06730 zinc finger (C3HC4-type RING finger)
family protein (ATL4) contains Pfam profile: PF00097
zinc finger, C3HC4 type (RING finger)
Length = 334
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSS 358
C H F A C+ L CP CRS + +S
Sbjct: 136 CCHAFHADCIDIWLVSNQTCPLCRSPLFAS 165
>At3g56580.2 68416.m06292 zinc finger (C3HC4-type RING finger)
family protein contains INTERPRO domain, IPR001841, RING
finger
Length = 320
Score = 29.1 bits (62), Expect = 2.9
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKS 355
C H++ + C+ L + + CP CR ++ S
Sbjct: 204 CHHIYHSDCIVPWLVQHNSCPVCRKELPS 232
>At3g56580.1 68416.m06291 zinc finger (C3HC4-type RING finger)
family protein contains INTERPRO domain, IPR001841, RING
finger
Length = 320
Score = 29.1 bits (62), Expect = 2.9
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKS 355
C H++ + C+ L + + CP CR ++ S
Sbjct: 204 CHHIYHSDCIVPWLVQHNSCPVCRKELPS 232
>At2g17730.1 68415.m02054 zinc finger (C3HC4-type RING finger)
family protein contains Pfam PF00097: Zinc finger, C3HC4
type (RING finger) domain; similar to RING-H2 finger
protein RHA3a (GI:3790573) [Arabidopsis thaliana];
similar to ReMembR-H2 protein JR700 (GI:6942147)
[Arabidopsis thaliana]
Length = 241
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
C H+F C+ L R CP CR I
Sbjct: 215 CHHMFHLPCIDNWLLRHGSCPMCRRDI 241
>At1g61140.1 68414.m06888 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to ATPase [Homo sapiens] GI:531196; contains Pfam
profiles PF00271: Helicase conserved C-terminal domain,
PF00176: SNF2 family N-terminal domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 1287
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 260 ATKCGHVFCATCLKTTLERQSD-CPKCRSKIK 352
A+ CGHVFC C+ L S+ CP ++
Sbjct: 1005 ASVCGHVFCKQCIYERLTGDSNHCPFANCNVR 1036
>At1g53820.1 68414.m06126 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 310
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSKIKS 355
+C H F C+ + S CP CR+ + S
Sbjct: 138 RCNHGFHVDCIDMWFQSHSTCPLCRNTVGS 167
>At1g11100.1 68414.m01271 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to RUSH-1alpha [Oryctolagus cuniculus]
GI:1655930; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain
Length = 1226
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSD-CPKCRSKI 349
CGHVFC C+ L R ++ CP K+
Sbjct: 934 CGHVFCNQCICECLTRDNNQCPLSYCKV 961
>At5g64920.1 68418.m08166 COP1-interacting protein (CIP8) / zinc
finger (C3HC4-type RING finger) family protein identical
to COP1-interacting protein CIP8 [Arabidopsis thaliana]
gi|5929906|gb|AAD56636; contains Pfam profile: PF00097
zinc finger, C3HC4 type
Length = 334
Score = 28.7 bits (61), Expect = 3.9
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKS 355
CGH + C+ L ++ CP CR ++++
Sbjct: 275 CGHCYHGDCIVPWLGTRNSCPVCRFQLET 303
>At5g39550.1 68418.m04791 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 617
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQS--DCPKCRSKI 349
T CGH FC C + Q C CRSKI
Sbjct: 142 TPCGHNFCLKCFEKWAVGQGKLTCMICRSKI 172
>At5g37280.1 68418.m04478 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHA1b [Arabidopsis thaliana] GI:3790567; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 216
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCR 340
KC H F C+ + RQ+ CP CR
Sbjct: 183 KCLHSFHQKCIFKWIGRQNSCPLCR 207
>At5g07040.1 68418.m00797 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 159
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSKIKSSR 361
+C H F C+ L + CP CR+ SR
Sbjct: 112 ECNHCFHTDCVDEWLRTSATCPLCRNSPAPSR 143
>At5g01450.1 68418.m00058 expressed protein
Length = 444
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +2
Query: 269 CGH-VFCATCLKTTLERQSDCPKCRSKIK 352
CGH V C C E CP CR KI+
Sbjct: 408 CGHCVACFQCGTRIAETSGFCPVCRKKIR 436
>At4g27470.1 68417.m03947 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 243
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 10/39 (25%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTL----------ERQSDCPKCRSKI 349
T CGH+FC C+ L + Q++CP C+S I
Sbjct: 57 TLCGHLFCWPCIYKWLHVQLSSVSVDQHQNNCPVCKSNI 95
>At4g10150.1 68417.m01660 zinc finger (C3HC4-type RING finger)
family protein RING-H2 finger protein RHA1a, Arabidopsis
thaliana,AF078683
Length = 236
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCR 340
CGH F C+ L + CP CR
Sbjct: 130 CGHTFHMECIDLWLTSHTTCPLCR 153
>At3g47160.1 68416.m05120 expressed protein similar to MTD2
[Medicago truncatula] GI:9294812; supporting cDNA
gi|25083983|gb|BT002136.1|
Length = 245
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIK 352
C H C C + R CP CR +K
Sbjct: 162 CTHSLCIKCYRDWHGRSESCPFCRDSLK 189
>At3g46620.1 68416.m05061 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 395
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKS 355
C H+F C+ L ++ CP CR ++ S
Sbjct: 233 CKHIFHGDCIVPWLSIRNSCPVCRFELPS 261
>At3g15740.1 68416.m01994 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 224
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRS 343
C HVF TC + L CP CR+
Sbjct: 196 CSHVFHRTCGEEWLRNSGICPVCRA 220
>At2g46495.1 68415.m05788 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 878
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRS 343
+C H F A C+ L+ CP CR+
Sbjct: 633 ECDHCFHAKCIDVWLKIHGSCPLCRN 658
>At2g39100.1 68415.m04804 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 296
Score = 28.7 bits (61), Expect = 3.9
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQSDCPKCRSKIKS 355
T C H +C C++ + +CP C ++ S
Sbjct: 56 TVCKHGYCLACIRKWSSFKRNCPLCNTRFDS 86
>At2g38920.1 68415.m04784 SPX (SYG1/Pho81/XPR1) domain-containing
protein / zinc finger (C3HC4-type RING finger)
protein-related weak similarity to tripartite motif
protein TRIM13 [Mus musculus] GI:12407427; contains Pfam
profile PF03105: SPX domain, weak hit to PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 335
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 11/52 (21%)
Frame = +2
Query: 260 ATKCGHVFCATCLKTTLE-----------RQSDCPKCRSKIKSSRGYHAIYL 382
A KCGH+FC +C + R S CP CR + H I L
Sbjct: 243 ALKCGHIFCNSCACSAASVLIFQGIKAAPRHSKCPICREAGVYAEAVHMIEL 294
>At2g35910.1 68415.m04408 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 zinc finger
protein ATL6 [Arabidopsis thaliana] GI:4928403; contains
Pfam profile PF00097: Zinc finger, C3HC4 type (RING
finger)
Length = 217
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRS 343
C H+F C+ T L CP CR+
Sbjct: 166 CNHLFHLKCIDTWLRLNPTCPVCRT 190
>At2g26135.1 68415.m03136 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF01485:IBR domain
Length = 384
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 6/39 (15%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLE------RQSDCPKCRSKIKSSRG 364
+CGH+FC+ C+K +E CP R K K + G
Sbjct: 171 QCGHMFCSECVKRHIEVSLLQGSLITCPSYRCKSKLTYG 209
>At1g66050.1 68414.m07497 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 623
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQS--DCPKCRSKI 349
T CGH FC C + Q C CRSKI
Sbjct: 142 TPCGHNFCLKCFEKWAVGQGKLTCMICRSKI 172
>At1g66040.1 68414.m07495 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 622
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQS--DCPKCRSKI 349
T CGH FC C + Q C CRSKI
Sbjct: 142 TPCGHNFCLKCFEKWAVGQGKLTCMICRSKI 172
>At1g63170.1 68414.m07139 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|Q06003 Goliath
protein (G1 protein) {Drosophila melanogaster}; contains
Pfam profile PF00097: Zinc finger, C3HC4 type (RING
finger)
Length = 381
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSSRGY 367
CGH F C+ L + CP C+ I S Y
Sbjct: 343 CGHHFHCGCVDKWLYINATCPLCKYNILKSSNY 375
>At1g53190.1 68414.m06028 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 finger protein RHG1a
GI:3822225 from [Arabidopsis thaliana]; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 494
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSK 346
CGH + A CL+ L ++ CP C+S+
Sbjct: 460 CGHEYHAECLEKWLIVKNVCPICKSE 485
>At1g18770.1 68414.m02340 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 106
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
CGH F C+ E CP CR K+
Sbjct: 77 CGHDFDDECVLKWFETNHSCPLCRFKL 103
>At5g41450.1 68418.m05034 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 164
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSSR 361
C HVF C+ L + CP CR + + +
Sbjct: 129 CRHVFHRFCIDPWLNQNLTCPNCRCSLTARK 159
>At4g35840.1 68417.m05091 zinc finger (C3HC4-type RING finger)
family protein contains a TG non-consensus donor splice
site at exon 2; contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 236
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCR 340
C H+F C+ L R CP CR
Sbjct: 210 CHHMFHLPCIDNWLFRHGSCPMCR 233
>At4g26400.2 68417.m03800 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 356
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
C H F C+ LE S CP CR ++
Sbjct: 259 CKHKFHIRCIVPWLELHSSCPVCRYEL 285
>At4g26400.1 68417.m03799 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 356
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
C H F C+ LE S CP CR ++
Sbjct: 259 CKHKFHIRCIVPWLELHSSCPVCRYEL 285
>At4g17920.1 68417.m02670 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 zinc finger protein
ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 289
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQSDCPKCR 340
T C HVF C+ E CP CR
Sbjct: 127 TTCYHVFHQECIDLWFESHRTCPVCR 152
>At3g58720.1 68416.m06545 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 238
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQSDCPKCR 340
T C H+F C+ L+ + CP CR
Sbjct: 160 TPCKHMFHEECIVPWLKTKGQCPVCR 185
>At3g20010.1 68416.m02531 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to transcription
factor RUSH-1alpha [Oryctolagus cuniculus] GI:1655930;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 1047
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 263 TKCGHVFCATC-LKTTLERQSDCPKCRSKIKSSR 361
T CGH+FC C L+ ++ CP R K + +R
Sbjct: 764 TLCGHIFCYECVLEYITGDENTCPVPRCKQQLAR 797
>At2g15530.2 68415.m01778 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 704
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSK 346
KCGH F C+K + ++ CP C+++
Sbjct: 673 KCGHEFHKDCIKQWVMIKNLCPICKTE 699
>At2g15530.1 68415.m01777 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 704
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSK 346
KCGH F C+K + ++ CP C+++
Sbjct: 673 KCGHEFHKDCIKQWVMIKNLCPICKTE 699
>At1g74620.1 68414.m08642 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 249
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
C H F C+ L+ CP CRS I
Sbjct: 202 CDHEFHGDCINKWLQLNHMCPLCRSSI 228
>At1g68070.1 68414.m07776 zinc finger (C3HC4-type RING finger)
family protein very low similarity to RING-H2 finger
protein RHG1a [Arabidopsis thaliana] GI:3822225;
contains Pfam profile: PF00097 zinc finger, C3HC4 type
(RING finger)
Length = 343
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
C H F +TC+ L+ + CP C+ I
Sbjct: 310 CNHHFHSTCIVKWLKMNATCPLCKFNI 336
>At1g28040.1 68414.m03433 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 336
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRS 343
+C H F C+ L+ S CP CR+
Sbjct: 308 ECDHCFHVQCIDEWLKIHSSCPVCRN 333
>At1g14200.1 68414.m01680 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 179
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCR 340
C H F + C++ L R + CP CR
Sbjct: 127 CKHKFHSKCVEEWLGRHATCPMCR 150
>At5g42200.1 68418.m05136 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 163
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
C H F C T L + CP CR+++
Sbjct: 123 CNHGFHQLCADTWLSNHTVCPVCRAEL 149
>At4g34040.1 68417.m04830 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 666
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRS 343
CGH F C+K L ++ CP C++
Sbjct: 637 CGHEFHTACVKQWLMLKNLCPICKT 661
>At4g32600.1 68417.m04642 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING finger protein 38
[Homo sapiens] GI:21666412; contains Pfam profile
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 453
Score = 27.9 bits (59), Expect = 6.8
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
C H F C+ L+ + CP C+S++
Sbjct: 381 CSHFFHKECVDKWLKINASCPLCKSEV 407
>At4g18110.1 68417.m02693 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 213
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSSR 361
C H F C+ L + CP CR I + R
Sbjct: 176 CSHSFHKDCILPWLRCKRSCPTCRDDIHNRR 206
>At4g17245.1 68417.m02593 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 166
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQ-SDCPKCRSKIKSS 358
+C H F C++ L S CP CR+ I SS
Sbjct: 120 RCKHGFHVYCIQKWLSSSHSSCPTCRTNIFSS 151
>At4g11680.1 68417.m01866 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|Q9WTV7 RING finger
protein 12 (LIM domain interacting RING finger protein)
{Mus musculus}; contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 390
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
C H F TC+ L S CP C+ I
Sbjct: 356 CNHHFHCTCIDKWLHINSRCPLCKFNI 382
>At4g08590.1 68417.m01412 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles PF00097: Zinc
finger C3HC4 type (RING finger), PF02182: YDG/SRA
domain
Length = 465
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSD-CPKCRSKI 349
CGH FC C +++ + C CRS I
Sbjct: 124 CGHNFCLKCFDKWIDQGNQICATCRSTI 151
>At3g60080.1 68416.m06709 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 306
Score = 27.9 bits (59), Expect = 6.8
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSS 358
C H++ + C+ L + CP CR ++ ++
Sbjct: 187 CSHIYHSDCIVPWLSDHNSCPLCRFELPTT 216
>At3g55530.1 68416.m06166 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 273
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKS 355
C H F A C+ L +Q CP C+ + S
Sbjct: 229 CLHQFHAGCIDPWLRQQGTCPVCKFRAHS 257
>At3g23060.1 68416.m02907 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 480
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTL--ERQSDCPKC 337
++C H FC +C++ ER + CP C
Sbjct: 30 SECLHTFCRSCIRNKFINERVNACPVC 56
>At2g35420.1 68415.m04341 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 254
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQSDCPKCRSKI 349
T C H F + C+ E CP CR ++
Sbjct: 120 TVCRHPFHSNCIDLWFELHKTCPVCRCEL 148
>At1g70910.1 68414.m08182 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 161
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
C HVF C+ L ++CP C +I
Sbjct: 130 CAHVFHGDCIDKWLSTSNNCPLCGVEI 156
>At1g68180.1 68414.m07788 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 248
Score = 27.9 bits (59), Expect = 6.8
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRSKI 349
KC H++ ++C+ + L + CP CR ++
Sbjct: 155 KCLHLYHSSCIVSWLNIHNTCPICRFEV 182
>At5g43530.1 68418.m05322 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger domain-containing
protein similar to SP|P36607 DNA repair protein rad8
{Schizosaccharomyces pombe}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain, PF00097: Zinc finger,
C3HC4 type (RING finger)
Length = 1277
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = +2
Query: 263 TKCGHVFCATCLKTTLERQSD--CPKCRSKIK 352
T C H C CL T+ S CP CR+ +K
Sbjct: 1053 TPCAHRMCRECLLTSWRSPSCGLCPICRTILK 1084
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 266 KCGHVFCATCLK-TTLERQSDCPKCRSKIKSSRG 364
+CG C C + E +CP+C+++ K RG
Sbjct: 58 ECGFPACRPCYEYERREGTQNCPQCKTRYKRLRG 91
>At5g04460.1 68418.m00443 expressed protein
Length = 863
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +2
Query: 266 KCGHVF-CATCLKTTLERQSDCPKCRSKI 349
+CGH+ C+ C + CP CR+ I
Sbjct: 825 RCGHMCTCSKCANELVRNGGKCPLCRAPI 853
>At3g63530.1 68416.m07156 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 248
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSSRGYH 370
C HV+ + C+ L CP C S++ H
Sbjct: 215 CKHVYHSECISKWLSINKVCPVCNSEVFGEPSIH 248
>At3g61550.1 68416.m06894 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 zinc finger protein
ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 212
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRS 343
+C H F CL L+ CP CR+
Sbjct: 154 ECKHYFHVYCLDAWLKLNGSCPVCRN 179
>At3g14970.1 68416.m01893 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 220
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRS 343
C HVF TC + L CP CR+
Sbjct: 192 CSHVFHRTCGEDWLRCSGICPVCRA 216
>At2g46160.1 68415.m05740 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 zinc finger protein
ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 214
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 266 KCGHVFCATCLKTTLERQSDCPKCRS 343
+C H F CL L+ CP CR+
Sbjct: 156 ECKHYFHLCCLDAWLKLNGSCPVCRN 181
>At2g34000.1 68415.m04163 zinc finger protein-related contains weak
hit to Pfam profile: PF00097 zinc finger, C3HC4 type
(RING finger)
Length = 151
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCR 340
C H+F C+ LE + CP CR
Sbjct: 110 CMHMFDEECIGKWLESHATCPVCR 133
>At2g15580.1 68415.m01784 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 196
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
C H F + CL L+ CP CR+ I
Sbjct: 168 CAHKFHSICLLPWLDTNVYCPYCRTDI 194
>At2g03000.1 68415.m00252 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 535
Score = 27.5 bits (58), Expect = 9.0
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
C H + C++ L+ + CP+CR K+
Sbjct: 499 CKHKYHLECVEKWLKIHTSCPQCRYKL 525
>At1g74870.1 68414.m08677 expressed protein contains similarity to
hypothetical proteins
Length = 289
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSS 358
CG C C E ++ CP CR K +
Sbjct: 231 CGFRICLFCHNKISENEARCPACRKDYKKT 260
>At1g67180.1 68414.m07642 zinc finger (C3HC4-type RING finger)
family protein / BRCT domain-containing protein contains
Pfam domains PF00533: BRCA1 C Terminus (BRCT) domain and
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 453
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 6/31 (19%)
Frame = +2
Query: 269 CGHVFCATCLKTTLER------QSDCPKCRS 343
CGH FC +C++ +R ++ CP C+S
Sbjct: 316 CGHRFCYSCIQKWADRLVSERKKTTCPLCKS 346
>At1g42540.1 68414.m04905 glutamate receptor family protein (GLR3.3)
plant glutamate receptor family, PMID:11379626
Length = 933
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -1
Query: 694 NSVPYLVPPGSLPYGYKFSNPSRT 623
N +PY VP +PYG NPS T
Sbjct: 503 NLLPYAVPVKFIPYGNGKENPSYT 526
>At1g18780.1 68414.m02341 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 325
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSSR 361
CGH F C+ R CP CR ++ R
Sbjct: 295 CGHEFDEECVLEWFVRSHVCPLCRLELPCER 325
>At1g12760.1 68414.m01481 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|Q9NVW2 RING finger
protein 12 (LIM domain interacting RING finger protein)
{Homo sapiens}; contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 368
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKIKSS 358
CGH F +C+ L + CP C+ I S
Sbjct: 331 CGHHFHCSCVDKWLYINATCPLCKYNILKS 360
>At1g04790.1 68414.m00475 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 634
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +2
Query: 269 CGHVFCATCLKTTLERQSDCPKCRSKI 349
C H F C+ L R CP C+S +
Sbjct: 607 CLHKFHKDCIDPWLGRSKSCPVCKSSV 633
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,953,260
Number of Sequences: 28952
Number of extensions: 255549
Number of successful extensions: 1009
Number of sequences better than 10.0: 235
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1002
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1487069504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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