Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0453.Seq
         (835 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    24   1.7  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    24   1.7  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    24   1.7  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    23   3.0  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   3.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   6.9  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   9.1  

>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 414 IVCWARSASLYVWDQ*SLVAXDXWPNIC 497
           +VC+  S ++Y  D     A D  PN+C
Sbjct: 24  VVCYFASWTIYRPDNGKFTALDTDPNLC 51


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 414 IVCWARSASLYVWDQ*SLVAXDXWPNIC 497
           +VC+  S ++Y  D     A D  PN+C
Sbjct: 24  VVCYFASWTIYRPDNGKFTALDTDPNLC 51


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 685 PGKRVLWKLHQVTSSRYESG 744
           PGK   W LH  + + +E+G
Sbjct: 208 PGKGSFWSLHPDSGNMFENG 227


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 750 NGQRGSKKHRVPLTLAENTLRGW 818
           NG++  KK  +   +A N LR W
Sbjct: 174 NGKKNQKKRGIFPKVATNILRAW 196


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 750 NGQRGSKKHRVPLTLAENTLRGW 818
           NG++  KK  +   +A N LR W
Sbjct: 330 NGKKNQKKRGIFPKVATNILRAW 352


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 665 PSLSNFNPGYVVPP 624
           P  S+FN GY+V P
Sbjct: 80  PHTSSFNMGYLVSP 93


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 127 RPSHPIPFSFIPVD 86
           +PS  I FS IPVD
Sbjct: 418 KPSFVIQFSHIPVD 431


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,533
Number of Sequences: 336
Number of extensions: 4374
Number of successful extensions: 20
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22932949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)