Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0449.Seq
         (748 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0834 - 28051067-28051381,28051675-28052120,28052330-280526...    30   1.7  
02_02_0468 + 10633992-10634064,10635998-10636130,10636244-106363...    30   2.2  

>03_05_0834 - 28051067-28051381,28051675-28052120,28052330-28052671,
            28053170-28053310,28053419-28053489,28053575-28053640,
            28053874-28054017,28054149-28054207,28054246-28054369,
            28054730-28054862,28055138-28055187,28055715-28055824,
            28057355-28057436,28057536-28057705,28057812-28058498,
            28058645-28058794,28058908-28059039,28059444-28059594,
            28060253-28060344,28062478-28062585
          Length = 1190

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
 Frame = +1

Query: 70   VELSADSMSPSN---QDLEDKLYNSILTGDYDSAVRKSLEYESQGQGSIVQNVVNNLIID 240
            ++L+ DS S  N   Q    K+Y   L      AV++  +YES G  +     V  + + 
Sbjct: 843  LQLATDSFSEKNVLGQGGFGKVYKGALPDGTKIAVKRLTDYESPGGEAAFLREVELISVA 902

Query: 241  KRRNTWSTATSCGSATDRIL 300
              RN       C + T+R+L
Sbjct: 903  VHRNLLRLIGFCTTQTERLL 922


>02_02_0468 +
           10633992-10634064,10635998-10636130,10636244-10636315,
           10637028-10637171,10637271-10637342,10637451-10637516,
           10637603-10637673,10637796-10637936,10638347-10638688,
           10638989-10639383,10639481-10639795
          Length = 607

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
 Frame = +1

Query: 70  VELSADSMSPSN---QDLEDKLYNSILTGDYDSAVRKSLEYESQGQGSIVQNVVNNLIID 240
           ++++ D+ S  N   Q    K+Y  +L      AV++  +YES G  +     V  + + 
Sbjct: 277 LQIATDNFSERNVLGQGGFGKVYKGVLPDGTKIAVKRLTDYESPGGEAAFLREVELISVA 336

Query: 241 KRRNTWSTATSCGSATDRIL 300
             RN       C + T+R+L
Sbjct: 337 VHRNLLKLIGFCTTQTERLL 356


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,297,797
Number of Sequences: 37544
Number of extensions: 392428
Number of successful extensions: 1128
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1128
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)