BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= tesV0448.Seq (499 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 3e-16 SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0) 44 9e-05 SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.92 SB_6388| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1 SB_27495| Best HMM Match : VWA (HMM E-Value=0) 29 2.8 SB_25272| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9 SB_31254| Best HMM Match : rve (HMM E-Value=5.2e-15) 27 6.5 SB_10970| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5 SB_51198| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5 SB_11559| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-33) 27 6.5 SB_41690| Best HMM Match : DSL (HMM E-Value=0) 27 8.6 SB_40902| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6 SB_17898| Best HMM Match : Entericidin (HMM E-Value=4.3) 27 8.6 SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6 SB_53064| Best HMM Match : Hexapep (HMM E-Value=2.7e-07) 27 8.6 SB_44775| Best HMM Match : DUF143 (HMM E-Value=7.3e-20) 27 8.6 SB_10156| Best HMM Match : DSL (HMM E-Value=3.3e-35) 27 8.6 >SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1554 Score = 81.8 bits (193), Expect = 3e-16 Identities = 40/70 (57%), Positives = 51/70 (72%) Frame = +2 Query: 218 QGQLRPSPNAVGGDVGDMFVPILEGFLERVEDSGSVLASLLEQIPAMFRENKETETVMLP 397 +G L V DV DMFVP+L+GFL V+++ SV+ SLLEQIP MF E ++TETV+ P Sbjct: 920 KGNLAQPQMMVVSDVDDMFVPLLDGFLVSVDEARSVIESLLEQIPLMFAETRDTETVLGP 979 Query: 398 AVQAGLEALK 427 VQAG+EALK Sbjct: 980 VVQAGIEALK 989 >SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0) Length = 942 Score = 43.6 bits (98), Expect = 9e-05 Identities = 22/57 (38%), Positives = 35/57 (61%) Frame = +3 Query: 87 SGLVDAFCENILDIIRELPKDEQGKSYTRVGFITYSSTVHFYNIKGSLGQAQMLSVA 257 +G + C+ + + + +LP G S T VGF+++ STVHFY++K L Q QM V+ Sbjct: 453 AGYLHVACKLLKENLEKLP----GDSRTLVGFLSFDSTVHFYSLKPKLTQPQMFIVS 505 Score = 33.5 bits (73), Expect = 0.099 Identities = 14/54 (25%), Positives = 31/54 (57%) Frame = +2 Query: 257 DVGDMFVPILEGFLERVEDSGSVLASLLEQIPAMFRENKETETVMLPAVQAGLE 418 D+ D+F+P + L +++S ++ LL+ +P MF ++ + A+Q+ L+ Sbjct: 506 DLDDIFLPAPDDLLVNLKESKELIYQLLDSLPTMFSGSRNIHSAAGAALQSALK 559 >SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1880 Score = 30.3 bits (65), Expect = 0.92 Identities = 21/55 (38%), Positives = 24/55 (43%) Frame = +1 Query: 253 WRRGRHVRAHPGGVPGEGRGQRLGARLPAGADSRHVQREQGDGDCHAAGRSGWSG 417 WRRG R GG G G G+ GA G R R +G G+ GR G G Sbjct: 119 WRRGGVQRGGRGGWRGRGGGEGNGA---GGGIGRGGGRGRGGGEGGWGGRGGNGG 170 >SB_6388| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1520 Score = 29.1 bits (62), Expect = 2.1 Identities = 18/51 (35%), Positives = 27/51 (52%) Frame = +2 Query: 302 RVEDSGSVLASLLEQIPAMFRENKETETVMLPAVQAGLEALKAADTRRSPV 454 +++ G ++A L Q+ MFR + E E V L + ALKA + SPV Sbjct: 230 KLDQKGRLVA--LAQLQEMFRHSLEPEVVHLILTENDYNALKAMEEGISPV 278 >SB_27495| Best HMM Match : VWA (HMM E-Value=0) Length = 1064 Score = 28.7 bits (61), Expect = 2.8 Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Frame = +1 Query: 325 ARLPAGADSRHVQREQGDGDCHAAGRSGW----SGSFESCRHPPVTC 453 +R+P G ++ + Q + D G + +G F C HPP+ C Sbjct: 818 SRIPCGDTAKKFGQSQQENDWDCPGETKCCPDETGCFSYCTHPPLAC 864 >SB_25272| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 179 Score = 27.9 bits (59), Expect = 4.9 Identities = 17/59 (28%), Positives = 27/59 (45%) Frame = +2 Query: 200 RSLLQHQGQLRPSPNAVGGDVGDMFVPILEGFLERVEDSGSVLASLLEQIPAMFRENKE 376 ++LLQ QG +PSPN GD + P E E+ ++ L+ + +E E Sbjct: 12 KTLLQRQGVPKPSPNKFAGDSSEF--PTFEWLEEKGFSEKEKISLLISFVQGEAKETIE 68 >SB_31254| Best HMM Match : rve (HMM E-Value=5.2e-15) Length = 341 Score = 27.5 bits (58), Expect = 6.5 Identities = 17/49 (34%), Positives = 28/49 (57%) Frame = +2 Query: 179 LHHLQLDRSLLQHQGQLRPSPNAVGGDVGDMFVPILEGFLERVEDSGSV 325 L++ +L+ +LL + + P G G VPILE LE++ D+G+V Sbjct: 191 LNYCELEDALLDVETVMNNRPLVYQG--GGRPVPILEEDLEKLSDAGNV 237 >SB_10970| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1256 Score = 27.5 bits (58), Expect = 6.5 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 4/33 (12%) Frame = +1 Query: 379 GDCHAAGR----SGWSGSFESCRHPPVTCSCST 465 GDC A G +GW GS S P+TC+ T Sbjct: 307 GDCAADGSCVCAAGWGGSTCSLPECPITCTSGT 339 >SB_51198| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1627 Score = 27.5 bits (58), Expect = 6.5 Identities = 11/31 (35%), Positives = 20/31 (64%) Frame = +2 Query: 218 QGQLRPSPNAVGGDVGDMFVPILEGFLERVE 310 +G P+P + GD G++ V IL+ F++ V+ Sbjct: 979 EGATPPAPITIAGDHGNILVAILDTFVKIVD 1009 >SB_11559| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-33) Length = 1485 Score = 27.5 bits (58), Expect = 6.5 Identities = 17/49 (34%), Positives = 28/49 (57%) Frame = +2 Query: 179 LHHLQLDRSLLQHQGQLRPSPNAVGGDVGDMFVPILEGFLERVEDSGSV 325 L++ +L+ +LL + + P G G VPILE LE++ D+G+V Sbjct: 1328 LNYCELEDALLDVETVMNNRPLVYQG--GGRPVPILEEDLEKLSDAGNV 1374 >SB_41690| Best HMM Match : DSL (HMM E-Value=0) Length = 2798 Score = 27.1 bits (57), Expect = 8.6 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = -2 Query: 339 SREASTEPLSSTLSRNPSRMGTNMSPTSPPTA 244 S S PL+ST+S +PSR G+ P P A Sbjct: 2499 SMSLSVLPLTSTVSASPSRPGSVKEPGWPARA 2530 >SB_40902| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 857 Score = 27.1 bits (57), Expect = 8.6 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%) Frame = +2 Query: 305 VEDSGSVLASLLEQIPA--MFRENKETETVMLPAVQAGLEALKA 430 + + SV LE + A +F E + +PAV+ GLEAL+A Sbjct: 538 LSSNASVFKEDLEHLRASGLFFEARPVALARMPAVERGLEALEA 581 >SB_17898| Best HMM Match : Entericidin (HMM E-Value=4.3) Length = 532 Score = 27.1 bits (57), Expect = 8.6 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = +2 Query: 155 REELHPRRLHHLQLDRSLLQHQGQLRPSPNAVG 253 ++++ PRRL H L R LQ +R +A G Sbjct: 458 KQQVPPRRLRHYHLQRRPLQKMSSVRSYRHAFG 490 >SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 4072 Score = 27.1 bits (57), Expect = 8.6 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = -2 Query: 351 GICSSREASTEPLSSTLSRNPSRMGTNMSPTS 256 G S E++ EPL++ S + GT +SP S Sbjct: 393 GTTESSESTVEPLTTAASESTVAPGTTLSPES 424 >SB_53064| Best HMM Match : Hexapep (HMM E-Value=2.7e-07) Length = 585 Score = 27.1 bits (57), Expect = 8.6 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = -2 Query: 351 GICSSREASTEPLSSTLSRNPSRMGTNMSPTS 256 G S E++ EPL++ S + GT +SP S Sbjct: 365 GTTESSESTVEPLTTAASESTVAPGTTLSPES 396 >SB_44775| Best HMM Match : DUF143 (HMM E-Value=7.3e-20) Length = 342 Score = 27.1 bits (57), Expect = 8.6 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Frame = +3 Query: 210 YNIKGSLGQAQMLSVATWATCSCPSWRGS-WRGS 308 Y++ ++ +++S ATC+C RGS WR S Sbjct: 3 YSLSQNIRNTRLISQPHGATCTCTQRRGSIWRPS 36 >SB_10156| Best HMM Match : DSL (HMM E-Value=3.3e-35) Length = 681 Score = 27.1 bits (57), Expect = 8.6 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = -2 Query: 339 SREASTEPLSSTLSRNPSRMGTNMSPTSPPTA 244 S S PL+ST+S +PSR G+ P P A Sbjct: 490 SMSLSVLPLTSTVSASPSRPGSVKEPGWPARA 521 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,062,317 Number of Sequences: 59808 Number of extensions: 313052 Number of successful extensions: 1369 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 1251 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1369 length of database: 16,821,457 effective HSP length: 77 effective length of database: 12,216,241 effective search space used: 1075029208 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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