Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0448.Seq
(499 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 78 4e-15
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 44 6e-05
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 37 0.009
U12966-6|AAM48533.1| 783|Caenorhabditis elegans Hypothetical pr... 31 0.46
AC091267-1|AAK31565.1| 789|Caenorhabditis elegans Hypothetical ... 31 0.61
AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical ... 29 1.4
Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical p... 29 1.9
U00049-6|AAM22030.1| 711|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z78416-8|CAB01683.2| 588|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z69717-4|CAA93533.2| 588|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z70286-1|CAA94294.2| 194|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z46787-20|CAC42257.1| 791|Caenorhabditis elegans Hypothetical p... 28 4.3
Z46787-19|CAO78706.1| 801|Caenorhabditis elegans Hypothetical p... 28 4.3
Z46787-18|CAO78705.1| 805|Caenorhabditis elegans Hypothetical p... 28 4.3
Z46787-17|CAO78704.1| 863|Caenorhabditis elegans Hypothetical p... 28 4.3
Z46787-16|CAO78703.1| 821|Caenorhabditis elegans Hypothetical p... 28 4.3
Z46787-15|CAO78702.1| 829|Caenorhabditis elegans Hypothetical p... 28 4.3
Z35596-6|CAA84644.2| 791|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z35596-5|CAO78716.1| 801|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z35596-4|CAO78715.1| 805|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z35596-3|CAO78714.1| 863|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z35596-2|CAO78713.1| 821|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z35596-1|CAO78712.1| 829|Caenorhabditis elegans Hypothetical pr... 28 4.3
U39652-3|AAA80402.1| 90|Caenorhabditis elegans Hypothetical pr... 28 4.3
AF257518-1|AAF68999.1| 791|Caenorhabditis elegans HERG-like pot... 28 4.3
Z81538-2|CAB04384.1| 90|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical pr... 27 5.7
U64859-4|AAC69094.1| 145|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z48543-1|CAA88432.1| 645|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z32683-2|CAA83619.1| 226|Caenorhabditis elegans Hypothetical pr... 27 7.6
U42841-13|AAC48170.1| 682|Caenorhabditis elegans Hypothetical p... 27 7.6
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 27 10.0
X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein. 27 10.0
X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein. 27 10.0
U41542-2|AAR30212.1| 623|Caenorhabditis elegans Suppressor of p... 27 10.0
U41542-1|AAR30211.1| 684|Caenorhabditis elegans Suppressor of p... 27 10.0
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 27 10.0
U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical pr... 27 10.0
L23651-5|AAU87829.1| 1127|Caenorhabditis elegans Nuclear pore co... 27 10.0
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 27 10.0
AL021497-20|CAA16410.3| 1057|Caenorhabditis elegans Hypothetical... 27 10.0
AL021497-19|CAA16406.2| 989|Caenorhabditis elegans Hypothetical... 27 10.0
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 77.8 bits (183), Expect = 4e-15
Identities = 31/84 (36%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 TTEYCRNNTLPKPPATVFVLDVSYNAVKSGLVDAFCENILDIIRELPKDE-QGKSYTRVG 179
T +YC+N PK PA +F++DVSYNA+ +G++ C+N+ ++R LP++ Q +S R+G
Sbjct: 521 TKQYCKNGIAPKEPAFIFMIDVSYNAISNGMLPILCQNLEKVLRNLPRESGQLESSMRIG 580
Query: 180 FITYSSTVHFYNIKGSLGQAQMLS 251
T+ VHF++I + + ++S
Sbjct: 581 LATFDQAVHFFDISSASPKMLVMS 604
Score = 58.0 bits (134), Expect = 4e-09
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = +2
Query: 248 VGGDVGDMFVPILEGFLERVEDSGSVLASLLEQIPAMFRENKETETVMLPAVQAGLEALK 427
V DV + FVP+++G L ++ L + L +IP +F ++K TET++ P VQAGL+ALK
Sbjct: 602 VMSDVQEPFVPMVDGLLLPYNEALPGLRAALAEIPKLFSQSKTTETILQPVVQAGLDALK 661
Query: 428 AAD 436
AD
Sbjct: 662 CAD 664
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical
protein ZC518.2 protein.
Length = 984
Score = 44.0 bits (99), Expect = 6e-05
Identities = 21/65 (32%), Positives = 38/65 (58%)
Frame = +3
Query: 33 PKPPATVFVLDVSYNAVKSGLVDAFCENILDIIRELPKDEQGKSYTRVGFITYSSTVHFY 212
P+P VFV+D+S A++SG + F E +L I ++P D++ ++V FI +HF+
Sbjct: 403 PQPAVYVFVIDISAAAIQSGYLHTFAEQLLINIDQMPGDDR----SQVCFIAVDQCLHFF 458
Query: 213 NIKGS 227
+ +
Sbjct: 459 SFSSN 463
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 36.7 bits (81), Expect = 0.009
Identities = 21/56 (37%), Positives = 26/56 (46%)
Frame = +1
Query: 277 AHPGGVPGEGRGQRLGARLPAGADSRHVQREQGDGDCHAAGRSGWSGSFESCRHPP 444
A P G PG G G + G + P G D H + G G G+ G SG +C H P
Sbjct: 276 AGPDGQPGHGGGGQPGPQGPPG-DDGHPGEDGGAGGPGQPGQDGGSGGSGACDHCP 330
>U12966-6|AAM48533.1| 783|Caenorhabditis elegans Hypothetical
protein F54D8.6 protein.
Length = 783
Score = 31.1 bits (67), Expect = 0.46
Identities = 21/48 (43%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Frame = +1
Query: 286 GGVPG----EGRGQRLGARLPAGADSRHVQREQGDGDCHAAGRSGWSG 417
GGVPG GRG R G P G DSR V R G G R G
Sbjct: 554 GGVPGVDRAPGRGSR-GIDRPPGGDSRGVDRPPGGGGIPGVDRPPGGG 600
>AC091267-1|AAK31565.1| 789|Caenorhabditis elegans Hypothetical
protein Y37B11A.1 protein.
Length = 789
Score = 30.7 bits (66), Expect = 0.61
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Frame = +3
Query: 36 KPPATVFV--LDVSYNAVKSG-LVDAFCENILDIIRELPKDEQ-GKSYTRVGFITYSSTV 203
KP VF LD+ + SG L D F + I DIIR + K GK+ TRV I +S T
Sbjct: 43 KPRCKVFAPPLDLVFILDSSGSLRDKFQDEI-DIIRRILKHVTIGKTATRVMLIQFSGTQ 101
Query: 204 HF-YNIKGSLGQAQMLS 251
H +N + + ++L+
Sbjct: 102 HLEFNFEKFTDREELLA 118
>AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical
protein Y41D4B.18 protein.
Length = 338
Score = 29.5 bits (63), Expect = 1.4
Identities = 22/71 (30%), Positives = 29/71 (40%)
Frame = -2
Query: 459 TRTGDRRVSAAFKASRPA*TAGSMTVSVSLFSLNMAGICSSREASTEPLSSTLSRNPSRM 280
T T S+ S PA T T S +S + S++P+SS+ S S
Sbjct: 230 TSTAYAAPSSTASTSTPAPTNLPTTTGAPTNSTTNPPTATSPKTSSQPVSSSTSSTSSPA 289
Query: 279 GTNMSPTSPPT 247
TN TS PT
Sbjct: 290 PTNPPTTSRPT 300
>Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical
protein D1086.6 protein.
Length = 282
Score = 29.1 bits (62), Expect = 1.9
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = -2
Query: 465 CGTRTGDRRVSAAFKASR--PA*TAGSMTVSVSLFSLNMAGICSSREASTEPLSSTLSRN 292
C G+ A F+ S+ PA T S TV + S + +T +SST + N
Sbjct: 109 CAAAGGNYYAGANFQCSKYTPAPTVTSTTVVDTSESSTSQSTTTPSTTTTIIVSSTTTTN 168
Query: 291 PSRMGTNMSPTSPPT 247
P+ T+ +PT+P T
Sbjct: 169 PT---TSTTPTTPTT 180
>U00049-6|AAM22030.1| 711|Caenorhabditis elegans Hypothetical
protein C18F10.2 protein.
Length = 711
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 284 LEGFLERVEDSGSVLASLLEQIPAMFRENKET-ETVMLPAVQAGLEALKAADTRRSP 451
+ F+E + SG L S+L+ IPAM + +L + + + ++DT +SP
Sbjct: 607 ISNFIENLSSSGLDLKSVLKMIPAMNSSGTSLHKDAVLDLLNSFKSKISSSDTPKSP 663
>Z78416-8|CAB01683.2| 588|Caenorhabditis elegans Hypothetical
protein E01G6.3 protein.
Length = 588
Score = 28.7 bits (61), Expect = 2.5
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 273 SCPSWRGSWRGSRTAARCSPPCWS 344
S P W W+ R A SP C+S
Sbjct: 59 SLPEWTNPWKNIRNATEYSPSCFS 82
>Z69717-4|CAA93533.2| 588|Caenorhabditis elegans Hypothetical
protein E01G6.3 protein.
Length = 588
Score = 28.7 bits (61), Expect = 2.5
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 273 SCPSWRGSWRGSRTAARCSPPCWS 344
S P W W+ R A SP C+S
Sbjct: 59 SLPEWTNPWKNIRNATEYSPSCFS 82
>Z70286-1|CAA94294.2| 194|Caenorhabditis elegans Hypothetical
protein K08C7.4 protein.
Length = 194
Score = 27.9 bits (59), Expect = 4.3
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = -3
Query: 194 AVGDEADAGVALPLLVLGQLPDDVEDVLAERVDEAALDGVVRHVQHEHGGRRLRQRVVP 18
AVG ADA + P LV+ E++ E V+E ++ + GGR +R + P
Sbjct: 9 AVGPAADADITKPELVVPSEDPKTEEI--ESVEEKTVEKSTEKPVDKKGGRPVRGKKSP 65
>Z46787-20|CAC42257.1| 791|Caenorhabditis elegans Hypothetical
protein C30D11.1f protein.
Length = 791
Score = 27.9 bits (59), Expect = 4.3
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = +3
Query: 99 DAFCENILDIIRELPKDEQG--KSYTRVGFITYSSTVHF--YNIK--GSLGQAQML-SVA 257
+ FC+N L I L D Q K + R + SS+++ Y G G A + S
Sbjct: 529 ETFCKN-LTITYNLRDDAQSLRKKFDRHKLLRMSSSMNKDRYTTPPDGDHGNAAVRRSAE 587
Query: 258 TWATC-SCPSWRGSWRGSRTAARCSPP 335
+ + C S P R GSR+++RCSPP
Sbjct: 588 SVSRCDSNPIDRRQSAGSRSSSRCSPP 614
>Z46787-19|CAO78706.1| 801|Caenorhabditis elegans Hypothetical
protein C30D11.1e protein.
Length = 801
Score = 27.9 bits (59), Expect = 4.3
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = +3
Query: 99 DAFCENILDIIRELPKDEQG--KSYTRVGFITYSSTVHF--YNIK--GSLGQAQML-SVA 257
+ FC+N L I L D Q K + R + SS+++ Y G G A + S
Sbjct: 539 ETFCKN-LTITYNLRDDAQSLRKKFDRHKLLRMSSSMNKDRYTTPPDGDHGNAAVRRSAE 597
Query: 258 TWATC-SCPSWRGSWRGSRTAARCSPP 335
+ + C S P R GSR+++RCSPP
Sbjct: 598 SVSRCDSNPIDRRQSAGSRSSSRCSPP 624
>Z46787-18|CAO78705.1| 805|Caenorhabditis elegans Hypothetical
protein C30D11.1d protein.
Length = 805
Score = 27.9 bits (59), Expect = 4.3
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = +3
Query: 99 DAFCENILDIIRELPKDEQG--KSYTRVGFITYSSTVHF--YNIK--GSLGQAQML-SVA 257
+ FC+N L I L D Q K + R + SS+++ Y G G A + S
Sbjct: 543 ETFCKN-LTITYNLRDDAQSLRKKFDRHKLLRMSSSMNKDRYTTPPDGDHGNAAVRRSAE 601
Query: 258 TWATC-SCPSWRGSWRGSRTAARCSPP 335
+ + C S P R GSR+++RCSPP
Sbjct: 602 SVSRCDSNPIDRRQSAGSRSSSRCSPP 628
>Z46787-17|CAO78704.1| 863|Caenorhabditis elegans Hypothetical
protein C30D11.1c protein.
Length = 863
Score = 27.9 bits (59), Expect = 4.3
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = +3
Query: 99 DAFCENILDIIRELPKDEQG--KSYTRVGFITYSSTVHF--YNIK--GSLGQAQML-SVA 257
+ FC+N L I L D Q K + R + SS+++ Y G G A + S
Sbjct: 601 ETFCKN-LTITYNLRDDAQSLRKKFDRHKLLRMSSSMNKDRYTTPPDGDHGNAAVRRSAE 659
Query: 258 TWATC-SCPSWRGSWRGSRTAARCSPP 335
+ + C S P R GSR+++RCSPP
Sbjct: 660 SVSRCDSNPIDRRQSAGSRSSSRCSPP 686
>Z46787-16|CAO78703.1| 821|Caenorhabditis elegans Hypothetical
protein C30D11.1b protein.
Length = 821
Score = 27.9 bits (59), Expect = 4.3
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = +3
Query: 99 DAFCENILDIIRELPKDEQG--KSYTRVGFITYSSTVHF--YNIK--GSLGQAQML-SVA 257
+ FC+N L I L D Q K + R + SS+++ Y G G A + S
Sbjct: 559 ETFCKN-LTITYNLRDDAQSLRKKFDRHKLLRMSSSMNKDRYTTPPDGDHGNAAVRRSAE 617
Query: 258 TWATC-SCPSWRGSWRGSRTAARCSPP 335
+ + C S P R GSR+++RCSPP
Sbjct: 618 SVSRCDSNPIDRRQSAGSRSSSRCSPP 644
>Z46787-15|CAO78702.1| 829|Caenorhabditis elegans Hypothetical
protein C30D11.1a protein.
Length = 829
Score = 27.9 bits (59), Expect = 4.3
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = +3
Query: 99 DAFCENILDIIRELPKDEQG--KSYTRVGFITYSSTVHF--YNIK--GSLGQAQML-SVA 257
+ FC+N L I L D Q K + R + SS+++ Y G G A + S
Sbjct: 567 ETFCKN-LTITYNLRDDAQSLRKKFDRHKLLRMSSSMNKDRYTTPPDGDHGNAAVRRSAE 625
Query: 258 TWATC-SCPSWRGSWRGSRTAARCSPP 335
+ + C S P R GSR+++RCSPP
Sbjct: 626 SVSRCDSNPIDRRQSAGSRSSSRCSPP 652
>Z35596-6|CAA84644.2| 791|Caenorhabditis elegans Hypothetical
protein C30D11.1f protein.
Length = 791
Score = 27.9 bits (59), Expect = 4.3
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = +3
Query: 99 DAFCENILDIIRELPKDEQG--KSYTRVGFITYSSTVHF--YNIK--GSLGQAQML-SVA 257
+ FC+N L I L D Q K + R + SS+++ Y G G A + S
Sbjct: 529 ETFCKN-LTITYNLRDDAQSLRKKFDRHKLLRMSSSMNKDRYTTPPDGDHGNAAVRRSAE 587
Query: 258 TWATC-SCPSWRGSWRGSRTAARCSPP 335
+ + C S P R GSR+++RCSPP
Sbjct: 588 SVSRCDSNPIDRRQSAGSRSSSRCSPP 614
>Z35596-5|CAO78716.1| 801|Caenorhabditis elegans Hypothetical
protein C30D11.1e protein.
Length = 801
Score = 27.9 bits (59), Expect = 4.3
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = +3
Query: 99 DAFCENILDIIRELPKDEQG--KSYTRVGFITYSSTVHF--YNIK--GSLGQAQML-SVA 257
+ FC+N L I L D Q K + R + SS+++ Y G G A + S
Sbjct: 539 ETFCKN-LTITYNLRDDAQSLRKKFDRHKLLRMSSSMNKDRYTTPPDGDHGNAAVRRSAE 597
Query: 258 TWATC-SCPSWRGSWRGSRTAARCSPP 335
+ + C S P R GSR+++RCSPP
Sbjct: 598 SVSRCDSNPIDRRQSAGSRSSSRCSPP 624
>Z35596-4|CAO78715.1| 805|Caenorhabditis elegans Hypothetical
protein C30D11.1d protein.
Length = 805
Score = 27.9 bits (59), Expect = 4.3
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = +3
Query: 99 DAFCENILDIIRELPKDEQG--KSYTRVGFITYSSTVHF--YNIK--GSLGQAQML-SVA 257
+ FC+N L I L D Q K + R + SS+++ Y G G A + S
Sbjct: 543 ETFCKN-LTITYNLRDDAQSLRKKFDRHKLLRMSSSMNKDRYTTPPDGDHGNAAVRRSAE 601
Query: 258 TWATC-SCPSWRGSWRGSRTAARCSPP 335
+ + C S P R GSR+++RCSPP
Sbjct: 602 SVSRCDSNPIDRRQSAGSRSSSRCSPP 628
>Z35596-3|CAO78714.1| 863|Caenorhabditis elegans Hypothetical
protein C30D11.1c protein.
Length = 863
Score = 27.9 bits (59), Expect = 4.3
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = +3
Query: 99 DAFCENILDIIRELPKDEQG--KSYTRVGFITYSSTVHF--YNIK--GSLGQAQML-SVA 257
+ FC+N L I L D Q K + R + SS+++ Y G G A + S
Sbjct: 601 ETFCKN-LTITYNLRDDAQSLRKKFDRHKLLRMSSSMNKDRYTTPPDGDHGNAAVRRSAE 659
Query: 258 TWATC-SCPSWRGSWRGSRTAARCSPP 335
+ + C S P R GSR+++RCSPP
Sbjct: 660 SVSRCDSNPIDRRQSAGSRSSSRCSPP 686
>Z35596-2|CAO78713.1| 821|Caenorhabditis elegans Hypothetical
protein C30D11.1b protein.
Length = 821
Score = 27.9 bits (59), Expect = 4.3
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = +3
Query: 99 DAFCENILDIIRELPKDEQG--KSYTRVGFITYSSTVHF--YNIK--GSLGQAQML-SVA 257
+ FC+N L I L D Q K + R + SS+++ Y G G A + S
Sbjct: 559 ETFCKN-LTITYNLRDDAQSLRKKFDRHKLLRMSSSMNKDRYTTPPDGDHGNAAVRRSAE 617
Query: 258 TWATC-SCPSWRGSWRGSRTAARCSPP 335
+ + C S P R GSR+++RCSPP
Sbjct: 618 SVSRCDSNPIDRRQSAGSRSSSRCSPP 644
>Z35596-1|CAO78712.1| 829|Caenorhabditis elegans Hypothetical
protein C30D11.1a protein.
Length = 829
Score = 27.9 bits (59), Expect = 4.3
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = +3
Query: 99 DAFCENILDIIRELPKDEQG--KSYTRVGFITYSSTVHF--YNIK--GSLGQAQML-SVA 257
+ FC+N L I L D Q K + R + SS+++ Y G G A + S
Sbjct: 567 ETFCKN-LTITYNLRDDAQSLRKKFDRHKLLRMSSSMNKDRYTTPPDGDHGNAAVRRSAE 625
Query: 258 TWATC-SCPSWRGSWRGSRTAARCSPP 335
+ + C S P R GSR+++RCSPP
Sbjct: 626 SVSRCDSNPIDRRQSAGSRSSSRCSPP 652
>U39652-3|AAA80402.1| 90|Caenorhabditis elegans Hypothetical
protein R07E4.3 protein.
Length = 90
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -1
Query: 373 LVLSEHGGNLLQQGGEHRAAVLDPLQEPLQDGHEHVAHVATDSIWAW 233
+ + +H GNL + GEHR A L P ++ G A V T + W
Sbjct: 6 VAMGKHFGNLGKMYGEHRFA-LAPNEQKAYKGFFDQAFVRTFKTYVW 51
>AF257518-1|AAF68999.1| 791|Caenorhabditis elegans HERG-like
potassium channel protein.
Length = 791
Score = 27.9 bits (59), Expect = 4.3
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = +3
Query: 99 DAFCENILDIIRELPKDEQG--KSYTRVGFITYSSTVHF--YNIK--GSLGQAQML-SVA 257
+ FC+N L I L D Q K + R + SS+++ Y G G A + S
Sbjct: 529 ETFCKN-LTITYNLRDDAQSLRKKFDRHKLLRMSSSMNKDRYTTPPDGDHGNAAVRRSAE 587
Query: 258 TWATC-SCPSWRGSWRGSRTAARCSPP 335
+ + C S P R GSR+++RCSPP
Sbjct: 588 SVSRCDSNPIDRRQSAGSRSSSRCSPP 614
>Z81538-2|CAB04384.1| 90|Caenorhabditis elegans Hypothetical
protein F45H10.2 protein.
Length = 90
Score = 27.5 bits (58), Expect = 5.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 367 LSEHGGNLLQQGGEHRAAVLDPLQEPLQDGHEHVAHVATDSIWAW 233
+ +H GNL + GEHR A L P ++ G A V T + W
Sbjct: 8 MGKHFGNLGKMYGEHRFA-LAPNEQKAYKGFFDQAFVKTFKTYVW 51
>Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.1 protein.
Length = 297
Score = 27.5 bits (58), Expect = 5.7
Identities = 22/60 (36%), Positives = 25/60 (41%)
Frame = +1
Query: 262 GRHVRAHPGGVPGEGRGQRLGARLPAGADSRHVQREQGDGDCHAAGRSGWSGSFESCRHP 441
GR PG G+ R GA G R +R G C AGRSG G+ S HP
Sbjct: 213 GRRGHGSPGAPGRAGQPGRQGA---PGNPGRPGERGPS-GPCGPAGRSGQPGNRGSDGHP 268
>U64859-4|AAC69094.1| 145|Caenorhabditis elegans Hypothetical
protein R09F10.5 protein.
Length = 145
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 111 ENILDIIRELPKDEQGKSYTRVG 179
E + +IIRELP DEQ Y R+G
Sbjct: 68 ETVQEIIRELPNDEQ---YERIG 87
>Z48543-1|CAA88432.1| 645|Caenorhabditis elegans Hypothetical
protein C18D1.1 protein.
Length = 645
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +2
Query: 221 GQLRPS---PNAVGGDVGDMFVPILEGFLERVEDSGSVLASLLEQIP 352
G + PS P G ++G+ P ++ +DSG L L Q+P
Sbjct: 576 GSISPSGSIPEGFGKNIGEKAFPTQSFLIKCNDDSGEFLTEFLAQLP 622
>Z32683-2|CAA83619.1| 226|Caenorhabditis elegans Hypothetical
protein R07E5.2 protein.
Length = 226
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 254 GDVGDMFVPILEGFLERVEDSGSVL 328
G +GDM +P+L F +++ DS VL
Sbjct: 121 GGLGDMDIPLLADFNKKIADSFGVL 145
>U42841-13|AAC48170.1| 682|Caenorhabditis elegans Hypothetical
protein T17H7.1 protein.
Length = 682
Score = 27.1 bits (57), Expect = 7.6
Identities = 23/75 (30%), Positives = 29/75 (38%)
Frame = +1
Query: 262 GRHVRAHPGGVPGEGRGQRLGARLPAGADSRHVQREQGDGDCHAAGRSGWSGSFESCRHP 441
GR PGG+ G G+G G P G R + D + G G +FES R P
Sbjct: 579 GRRGPGGPGGLGGRGQGPDFG---PGGQGDR---GQGPDFGARSQGNRGQGPAFES-RQP 631
Query: 442 PVTCSCSTLRCPLQR 486
T P Q+
Sbjct: 632 RQFDDADTSSAPSQK 646
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 26.6 bits (56), Expect = 10.0
Identities = 18/45 (40%), Positives = 19/45 (42%)
Frame = +1
Query: 283 PGGVPGEGRGQRLGARLPAGADSRHVQREQGDGDCHAAGRSGWSG 417
P G PG G R G P GA + R DG GR G SG
Sbjct: 234 PAGHPGSSGGGRPGPAGPKGAPGQ-PGRPGPDGHPGQPGRPGQSG 277
>Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.2 protein.
Length = 316
Score = 26.6 bits (56), Expect = 10.0
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +1
Query: 289 GVPGEGRGQRLGARLPAGADSRHVQREQGDGDCHAAGRSGWSGSFESCRHPP 444
G PG+ + G P G D+ G A G+ G SGS +C H P
Sbjct: 258 GQPGQAGSSQPGGPGPQG-DAGAPGAPGAPGQAGAPGQDGESGSEGACDHCP 308
>Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.1 protein.
Length = 316
Score = 26.6 bits (56), Expect = 10.0
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +1
Query: 289 GVPGEGRGQRLGARLPAGADSRHVQREQGDGDCHAAGRSGWSGSFESCRHPP 444
G PG+ + G P G D+ G A G+ G SGS +C H P
Sbjct: 258 GQPGQAGSSQPGGPGPQG-DAGAPGAPGAPGQAGAPGQDGESGSEGACDHCP 308
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 26.6 bits (56), Expect = 10.0
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 262 GRHVRAHPGGVPGE-GRGQRLGARLPAGADSRHVQREQGDGDCHAAGRSGWSG 417
GR+ PG PGE GR + G+R PAG + + G G+ A G G G
Sbjct: 198 GRNGEPQPGS-PGEPGRPGQPGSRGPAGQPGKD-GAQGGPGEKGANGEPGQPG 248
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 26.6 bits (56), Expect = 10.0
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = -2
Query: 459 TRTGDRRVSAAFKASRPA*TAGSMTVSVSLFSLNMAGICSSREASTEPLSSTLSRNPSRM 280
T T S+ + P T + T S S + + + +S ST P++ST++ + S
Sbjct: 412 TTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTTS--PSTSPVTSTVTSSSSSS 469
Query: 279 GTNMSPTS 256
T +PTS
Sbjct: 470 TTVTTPTS 477
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 26.6 bits (56), Expect = 10.0
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = -2
Query: 459 TRTGDRRVSAAFKASRPA*TAGSMTVSVSLFSLNMAGICSSREASTEPLSSTLSRNPSRM 280
T T S+ + P T + T S S + + + +S ST P++ST++ + S
Sbjct: 412 TTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTTS--PSTSPVTSTVTSSSSSS 469
Query: 279 GTNMSPTS 256
T +PTS
Sbjct: 470 TTVTTPTS 477
>X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 26.6 bits (56), Expect = 10.0
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +1
Query: 289 GVPGEGRGQRLGARLPAGADSRHVQREQGDGDCHAAGRSGWSGSFESCRHPP 444
G PG+ + G P G D+ G A G+ G SGS +C H P
Sbjct: 258 GQPGQAGSSQPGGPGPQG-DAGAPGAPGAPGQAGAPGQDGESGSEGACDHCP 308
>X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 26.6 bits (56), Expect = 10.0
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +1
Query: 289 GVPGEGRGQRLGARLPAGADSRHVQREQGDGDCHAAGRSGWSGSFESCRHPP 444
G PG+ + G P G D+ G A G+ G SGS +C H P
Sbjct: 258 GQPGQAGSSQPGGPGPQG-DAGAPGAPGAPGQAGAPGQDGESGSEGACDHCP 308
>U41542-2|AAR30212.1| 623|Caenorhabditis elegans Suppressor of
presenilin defectprotein 3, isoform b protein.
Length = 623
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +1
Query: 352 RHVQREQGDGDCHAAGRSGWSG---SFESCRHPPVTCSC 459
++ Q EQG CH G+ + G + RH PVT C
Sbjct: 12 KNEQGEQGSYKCHLCGQCFYRGCGLASHLRRHAPVTFDC 50
>U41542-1|AAR30211.1| 684|Caenorhabditis elegans Suppressor of
presenilin defectprotein 3, isoform a protein.
Length = 684
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +1
Query: 352 RHVQREQGDGDCHAAGRSGWSG---SFESCRHPPVTCSC 459
++ Q EQG CH G+ + G + RH PVT C
Sbjct: 12 KNEQGEQGSYKCHLCGQCFYRGCGLASHLRRHAPVTFDC 50
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 342 SSREASTEPLSSTLSRNPSRMGTNMSPTSPPT 247
+S +STE S+ S +R T M PT+P T
Sbjct: 219 TSTPSSTEASSTVTSTTTARTTTTMIPTTPTT 250
>U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical
protein W03A5.1 protein.
Length = 832
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +2
Query: 179 LHHLQLDRSLLQHQ-GQLRPSPNAVG 253
+HHL DRS L H+ R SP+ VG
Sbjct: 386 VHHLSTDRSALPHKLVYCRSSPSVVG 411
>L23651-5|AAU87829.1| 1127|Caenorhabditis elegans Nuclear pore
complex protein protein15 protein.
Length = 1127
Score = 26.6 bits (56), Expect = 10.0
Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = -1
Query: 367 LSEHGGN--LLQQGGEHRAAVLDPLQE 293
L EHG N LLQQGG A LD +E
Sbjct: 818 LKEHGRNDVLLQQGGSRVDAYLDNFKE 844
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 342 SSREASTEPLSSTLSRNPSRMGTNMSPTSPPT 247
+S +STE S+ S +R T M PT+P T
Sbjct: 201 TSTPSSTEASSTVTSTTTARTTTTMIPTTPTT 232
>AL021497-20|CAA16410.3| 1057|Caenorhabditis elegans Hypothetical
protein Y51A2D.7b protein.
Length = 1057
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/57 (21%), Positives = 26/57 (45%)
Frame = +3
Query: 102 AFCENILDIIRELPKDEQGKSYTRVGFITYSSTVHFYNIKGSLGQAQMLSVATWATC 272
A + +D+ R P + G + + S H++N + ++ Q +++ ATC
Sbjct: 60 ALVKPAIDVFRAFPASRP-TVFHYTGLLIHESAHHWFNAQENVQQVSNITIVNEATC 115
>AL021497-19|CAA16406.2| 989|Caenorhabditis elegans Hypothetical
protein Y51A2D.7a protein.
Length = 989
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/57 (21%), Positives = 26/57 (45%)
Frame = +3
Query: 102 AFCENILDIIRELPKDEQGKSYTRVGFITYSSTVHFYNIKGSLGQAQMLSVATWATC 272
A + +D+ R P + G + + S H++N + ++ Q +++ ATC
Sbjct: 60 ALVKPAIDVFRAFPASRP-TVFHYTGLLIHESAHHWFNAQENVQQVSNITIVNEATC 115
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,628,907
Number of Sequences: 27780
Number of extensions: 217401
Number of successful extensions: 1018
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1015
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -