Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0448.Seq
         (499 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    22   3.1  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   4.1  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   7.1  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   7.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.1  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   9.4  

>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 152 AREELHPRRLHHLQLDRSLLQH 217
           +R+ELHPR L  + L  +   H
Sbjct: 424 SRDELHPRELEAVNLGSACRIH 445


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = +3

Query: 135 ELPKDEQGKSYTRVGFITYSSTVHFY 212
           E+P+D+   +   +G++ +SST+ FY
Sbjct: 192 EVPEDKCPFT-EHLGYLIFSSTISFY 216


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/28 (28%), Positives = 12/28 (42%)
 Frame = +3

Query: 207 FYNIKGSLGQAQMLSVATWATCSCPSWR 290
           F+N + +     +L       CS P WR
Sbjct: 527 FHNAEEAFSPLSLLGGPLVMVCSAPVWR 554


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 5/15 (33%), Positives = 10/15 (66%)
 Frame = -1

Query: 274 EHVAHVATDSIWAWP 230
           +H+A +  D++W  P
Sbjct: 59  DHIADIGADALWLSP 73


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 57  VLDVSYNAVKSGLVDAFCENI 119
           V D  Y    SG+ +A C +I
Sbjct: 137 VFDCRYVTTTSGMFEALCNHI 157


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -3

Query: 110 AERVDEAALDGVVRHVQHEHGGRRLRQRVV 21
           A R  EAAL+ V    Q E+G R  R  ++
Sbjct: 406 ARRRVEAALEAVEEERQREYGIRVERDPIL 435


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,390
Number of Sequences: 438
Number of extensions: 2565
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)