Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0448.Seq
(499 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g07100.1 68416.m00845 protein transport protein Sec24, putati... 71 3e-13
At4g32640.1 68417.m04646 sec23/sec24 transport protein-related 60 8e-10
At3g44340.1 68416.m04764 sec23/sec24 transport family protein co... 60 8e-10
At1g20990.1 68414.m02627 DC1 domain-containing protein contains ... 34 0.061
At3g16520.3 68416.m02110 UDP-glucoronosyl/UDP-glucosyl transfera... 29 1.3
At3g16520.2 68416.m02109 UDP-glucoronosyl/UDP-glucosyl transfera... 29 1.3
At3g16520.1 68416.m02108 UDP-glucoronosyl/UDP-glucosyl transfera... 29 1.3
At1g65440.1 68414.m07424 glycine-rich protein 29 1.3
At5g59490.1 68418.m07456 haloacid dehalogenase-like hydrolase fa... 29 2.3
At5g39690.1 68418.m04806 no apical meristem (NAM) protein-relate... 28 3.0
At4g28880.1 68417.m04127 casein kinase, putative similar to simi... 28 3.0
At3g04350.1 68416.m00460 expressed protein 28 3.0
At4g39960.1 68417.m05660 DNAJ heat shock family protein similar ... 27 5.3
At1g54130.1 68414.m06171 RelA/SpoT protein, putative (RSH3) iden... 27 5.3
At5g08270.1 68418.m00974 expressed protein 27 7.0
At4g36960.1 68417.m05238 RNA recognition motif (RRM)-containing ... 27 7.0
At5g49470.2 68418.m06121 protein kinase family protein contains ... 27 9.3
At5g46070.1 68418.m05665 guanylate-binding family protein contai... 27 9.3
At4g00840.1 68417.m00115 zinc finger (DHHC type) family protein ... 27 9.3
At2g22360.1 68415.m02653 DNAJ heat shock family protein similar ... 27 9.3
>At3g07100.1 68416.m00845 protein transport protein Sec24, putative
similar to protein transport protein Sec24A
(SEC24-related protein) [Homo sapiens] SWISS-PROT:O95486
Length = 1038
Score = 71.3 bits (167), Expect = 3e-13
Identities = 34/75 (45%), Positives = 48/75 (64%)
Frame = +3
Query: 33 PKPPATVFVLDVSYNAVKSGLVDAFCENILDIIRELPKDEQGKSYTRVGFITYSSTVHFY 212
P PP F++DVS +A KSG+++ + I + LP G T++GFITY ST+HFY
Sbjct: 443 PMPPIYFFLIDVSISATKSGMLEVVAQTIKSCLDNLP----GYPRTQIGFITYDSTLHFY 498
Query: 213 NIKGSLGQAQMLSVA 257
N+K SL Q QM+ V+
Sbjct: 499 NMKSSLSQPQMMVVS 513
Score = 41.5 bits (93), Expect = 3e-04
Identities = 18/54 (33%), Positives = 34/54 (62%)
Frame = +2
Query: 248 VGGDVGDMFVPILEGFLERVEDSGSVLASLLEQIPAMFRENKETETVMLPAVQA 409
V D+ D+FVP+ + L + +S +V+ + L+ +P MF++N E+ PA++A
Sbjct: 511 VVSDLDDIFVPLPDDLLVNLSESRTVVDAFLDSLPLMFQDNFNVESAFGPALRA 564
>At4g32640.1 68417.m04646 sec23/sec24 transport protein-related
Length = 1069
Score = 60.1 bits (139), Expect = 8e-10
Identities = 30/74 (40%), Positives = 44/74 (59%)
Frame = +3
Query: 33 PKPPATVFVLDVSYNAVKSGLVDAFCENILDIIRELPKDEQGKSYTRVGFITYSSTVHFY 212
P P F++DVS NA+++G A C I ++ +LP+ + T VG T+ ST+HFY
Sbjct: 502 PMPAVYFFLIDVSMNAIQTGATAAACNAIQQVLSDLPEGPR----TFVGIATFDSTIHFY 557
Query: 213 NIKGSLGQAQMLSV 254
N+K +L Q ML V
Sbjct: 558 NLKRALQQPLMLIV 571
Score = 37.1 bits (82), Expect = 0.007
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 257 DVGDMFVPILEGFLERVEDSGSVLASLLEQIPAMFRENKETETVMLPAVQAGLEALKA 430
DV D++ P+ + ++ + L LL+ IP MF+E+K E+ AV+A A+K+
Sbjct: 573 DVQDVYTPLETDVVVQLSECRQHLELLLDSIPTMFQESKIPESAFGAAVKAAFLAMKS 630
>At3g44340.1 68416.m04764 sec23/sec24 transport family protein
contains Pfam domains PF04811: Sec23/Sec24 trunk domain,
PF04815: Sec23/Sec24 helical domain and PF04810:
Sec23/Sec24 zinc finger
Length = 1096
Score = 60.1 bits (139), Expect = 8e-10
Identities = 30/74 (40%), Positives = 44/74 (59%)
Frame = +3
Query: 33 PKPPATVFVLDVSYNAVKSGLVDAFCENILDIIRELPKDEQGKSYTRVGFITYSSTVHFY 212
P P F++DVS NA+++G A C I ++ +LP+ + T VG T+ ST+HFY
Sbjct: 505 PMPAVYFFLIDVSMNAIQTGATAAACSAIQQVLSDLPEGPR----TFVGIATFDSTIHFY 560
Query: 213 NIKGSLGQAQMLSV 254
N+K +L Q ML V
Sbjct: 561 NLKRALQQPLMLIV 574
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +2
Query: 257 DVGDMFVPILEGFLERVEDSGSVLASLLEQIPAMFRENKETETVMLPAVQAGLEALKA 430
DV D++ P+ + ++ + L LLE IP MF+E+K E+ AV+A A+K+
Sbjct: 576 DVQDVYTPLETDVIVQLSECRQHLEILLESIPTMFQESKSPESAFGAAVKAAFLAMKS 633
>At1g20990.1 68414.m02627 DC1 domain-containing protein contains
Pfam PF03107: DC1 domain; contains weak hit to Pfam
PF00569: Zinc finger, ZZ type
Length = 319
Score = 33.9 bits (74), Expect = 0.061
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = -3
Query: 227 AALDVVEVNGRAVGDEADAGVALPLLVLGQLPDD----VEDVLAERVDEAALDGVVRHVQ 60
AA++ + NG D++ A + + Q+ D + D L E V EA +DGV R
Sbjct: 241 AAVNGLRANGHKGRDKSPAVLGTAARLASQVVIDFLGGIIDGLGEGVGEAIIDGVTRGGG 300
Query: 59 HEHGGRRLRQRVVPAVLGG 3
GG RV+P V GG
Sbjct: 301 GGGGGNGGGTRVIPRVRGG 319
>At3g16520.3 68416.m02110 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 462
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 287 EGFLERVEDSGSVLASLLEQIPAM 358
EGFL R ED G V+ S Q+P +
Sbjct: 325 EGFLSRTEDKGMVVKSWAPQVPVL 348
>At3g16520.2 68416.m02109 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 446
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 287 EGFLERVEDSGSVLASLLEQIPAM 358
EGFL R ED G V+ S Q+P +
Sbjct: 325 EGFLSRTEDKGMVVKSWAPQVPVL 348
>At3g16520.1 68416.m02108 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 451
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 287 EGFLERVEDSGSVLASLLEQIPAM 358
EGFL R ED G V+ S Q+P +
Sbjct: 325 EGFLSRTEDKGMVVKSWAPQVPVL 348
>At1g65440.1 68414.m07424 glycine-rich protein
Length = 1647
Score = 29.5 bits (63), Expect = 1.3
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Frame = +1
Query: 253 WRRGRHVRAHPGGVP----GEGRGQRLGARLPAGADSRHVQREQGDGDCHAAGRSGWSGS 420
+R G HP G P G GRG+ G R +D + + G+ D A GW S
Sbjct: 1468 YRNGGGRDGHPSGAPRPYGGRGRGRGRGRRDDMNSDRQDGNGDWGNNDTGTAD-GGWGNS 1526
>At5g59490.1 68418.m07456 haloacid dehalogenase-like hydrolase
family protein low similarity to SP|P53078 SSM1 protein
{Saccharomyces cerevisiae}; contains InterPro accession
IPR005834: Haloacid dehalogenase-like hydrolase
Length = 266
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 21 NNTLPKPPATVFVLDVSYNAVKSGLVDAFCENILD-IIRELPKDEQG 158
N++ P+ +F LD + + SGL DA NI++ ++ +L DE G
Sbjct: 5 NSSPPRYECLLFDLDDTLYPLSSGLSDACSNNIIEYMVEKLGIDEDG 51
>At5g39690.1 68418.m04806 no apical meristem (NAM) protein-related
contains Pfam PF02365 : No apical meristem (NAM)
protein; similar to NAC domain protein NAC2
(GI:21554255) {Arabidopsis thaliana}
Length = 294
Score = 28.3 bits (60), Expect = 3.0
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = -3
Query: 137 LPDDVEDVLAERVDEAALDG 78
+PDD+ED LAE ++ +LDG
Sbjct: 250 IPDDLEDFLAELMEPHSLDG 269
>At4g28880.1 68417.m04127 casein kinase, putative similar to similar
to casein kinase I, delta isoform [Arabidopsis thaliana]
SWISS-PROT:P42158; contains protein kinase domain,
Pfam:PF00069
Length = 415
Score = 28.3 bits (60), Expect = 3.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 334 PAGADSRHVQREQGDGDCHAAGRSGWSGSFES 429
PAG R+V E + + R+GW+ SF S
Sbjct: 381 PAGTSKRNVGPETSNSGYGSGNRTGWTSSFMS 412
>At3g04350.1 68416.m00460 expressed protein
Length = 567
Score = 28.3 bits (60), Expect = 3.0
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +3
Query: 75 NAVKSGLVDAFCENILDIIRELPKDEQGKSYTRVGFITYSSTVHFYNIKGSLGQAQMLSV 254
N+ S L C N +D +LP+DE+ KS + G S+ + ++K +LG +
Sbjct: 308 NSTGSNLPAGGC-NDMDFWIDLPEDEEAKSNLKKG--NLESSELYVHVKPALG-GTFTDI 363
Query: 255 ATWATC 272
W C
Sbjct: 364 VMWIFC 369
>At4g39960.1 68417.m05660 DNAJ heat shock family protein similar to
SP|Q9S5A3 Chaperone protein dnaJ {Listeria
monocytogenes}; contains Pfam profiles PF00226 DnaJ
domain, PF01556 DnaJ C terminal region, PF00684 DnaJ
central domain (4 repeats)
Length = 447
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +1
Query: 286 GGVPGEGR---GQRLGARLPAGADSRHVQREQGDGDCHAAGRS 405
G G+GR +R+ ++PAG DS R +G+G+ G S
Sbjct: 287 GACSGDGRVRRTKRISLKVPAGVDSGSRLRVRGEGNAGKRGGS 329
>At1g54130.1 68414.m06171 RelA/SpoT protein, putative (RSH3)
identical to RSH3 (RelA/SpoT homolog) GI:7141308 from
[Arabidopsis thaliana]; contains Pfam profiles PF01966:
HD domain, PF04607: Region found in RelA / SpoT proteins
Length = 712
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -2
Query: 390 MTVSVSLFSLNMAGICSSREASTEPLSSTLSRNPSRMGTNMSPTSPPTAFGLGL 229
+ +++L++ + +CS+ +S L N SR + S TS PT GL L
Sbjct: 3 VATTIALYASPASTVCSTAHQINAHISCDLDLN-SRSSSASSSTSSPTIGGLSL 55
>At5g08270.1 68418.m00974 expressed protein
Length = 386
Score = 27.1 bits (57), Expect = 7.0
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 239 PNAVGGDVGDMFVPILEGFLERVEDSGSVLASLLEQIPAMFRENKETETVML 394
PN G+ GD+ + E FL R + S+ A +L+ I + + E +ML
Sbjct: 316 PNVAFGNTGDVKMGRFESFLSRTGSNSSLDAHVLKTIVLVATKALCNEELML 367
>At4g36960.1 68417.m05238 RNA recognition motif (RRM)-containing
protein similar to SP|P48809 Heterogeneous nuclear
ribonucleoprotein 27C (hnRNP 48) {Drosophila
melanogaster}; contains InterPro entry IPR000504:
RNA-binding region RNP-1 (RNA recognition motif) (RRM);
non-consensus TA donor splice site at exon 6
Length = 379
Score = 27.1 bits (57), Expect = 7.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 138 LPKDEQGKSYTRVGFITYSS 197
+PKD K + +GFIT+SS
Sbjct: 122 MPKDYNSKQHRGIGFITFSS 141
>At5g49470.2 68418.m06121 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 834
Score = 26.6 bits (56), Expect = 9.3
Identities = 15/61 (24%), Positives = 26/61 (42%)
Frame = +1
Query: 310 GQRLGARLPAGADSRHVQREQGDGDCHAAGRSGWSGSFESCRHPPVTCSCSTLRCPLQRG 489
G ++ +++ AG D+ E G GD H + + + +F R T T R +
Sbjct: 281 GNKVKSKMRAG-DNNAANLEGGSGDSHQSDQGFFDAAFADRREDAATSGADTPRGDFIQS 339
Query: 490 P 492
P
Sbjct: 340 P 340
>At5g46070.1 68418.m05665 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding protein,
C-terminal domain
Length = 1060
Score = 26.6 bits (56), Expect = 9.3
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -3
Query: 131 DDVEDVLAE-RVDEAALDGVVRHVQHEHGGRRLRQRVVPAVLG 6
D+++ LA+ R+ E ALD +R HG R + VV +G
Sbjct: 911 DNLQQELAQARLKETALDNKIRAASSSHGKRSRFEDVVDMDIG 953
>At4g00840.1 68417.m00115 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 262
Score = 26.6 bits (56), Expect = 9.3
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 8/52 (15%)
Frame = +1
Query: 340 GADSRHVQREQGDGDCHAAGRSGWSGSFES------CRH--PPVTCSCSTLR 471
G+ H +RE G GD AG S G+F S CR+ PP CS +
Sbjct: 15 GSVPEHFRREMGGGDSLEAGTSTDQGAFGSLGYCTKCRNVKPPRCHHCSVCK 66
>At2g22360.1 68415.m02653 DNAJ heat shock family protein similar to
SP|Q9S5A3 Chaperone protein dnaJ {Listeria
monocytogenes}; contains Pfam profiles PF00226 DnaJ
domain, PF01556 DnaJ C terminal region, PF00684 DnaJ
central domain (4 repeats)
Length = 442
Score = 26.6 bits (56), Expect = 9.3
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +1
Query: 286 GGVPGEGR---GQRLGARLPAGADSRHVQREQGDGDCHAAGRS 405
G G+GR +R+ ++PAG DS R +G+G+ G S
Sbjct: 281 GTCSGDGRVRKTKRISLKVPAGVDSGSRLRVRGEGNAGKRGGS 323
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,316,241
Number of Sequences: 28952
Number of extensions: 211612
Number of successful extensions: 947
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 878448512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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