Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0447.Seq
(648 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB724B Cluster: PREDICTED: similar to eukaryotic... 163 3e-39
UniRef50_P62495 Cluster: Eukaryotic peptide chain release factor... 150 3e-35
UniRef50_Q8SRZ6 Cluster: PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1;... 115 1e-24
UniRef50_Q98RP4 Cluster: Eukaryotic release factor 1 homolog; n=... 94 3e-18
UniRef50_Q9NCP1 Cluster: Eukaryotic peptide chain release factor... 90 4e-17
UniRef50_Q9NAX8 Cluster: Eukaryotic peptide chain release factor... 84 2e-15
UniRef50_Q5CD84 Cluster: Eukaryotic peptide chain release factor... 81 2e-14
UniRef50_A2EPZ2 Cluster: Eukaryotic release factor 1, putative; ... 73 6e-12
UniRef50_P58227 Cluster: Peptide chain release factor subunit 1;... 68 2e-10
UniRef50_Q8U0J4 Cluster: Peptide chain release factor subunit 1;... 63 5e-09
UniRef50_Q965E7 Cluster: Eukaryotic polypeptide chain release fa... 55 1e-06
UniRef50_Q74N59 Cluster: NEQ052; n=1; Nanoarchaeum equitans|Rep:... 54 3e-06
UniRef50_A7DMG3 Cluster: ERF1 domain 2 protein; n=1; Candidatus ... 54 3e-06
UniRef50_A0RX46 Cluster: Peptide chain release factor 1; n=2; Cr... 54 4e-06
UniRef50_Q9HNF0 Cluster: Peptide chain release factor subunit 1;... 52 2e-05
UniRef50_Q8TS00 Cluster: Peptide chain release factor subunit 1-... 51 3e-05
UniRef50_Q46FF0 Cluster: Peptide chain release factor, subunit 1... 47 5e-04
UniRef50_Q58239 Cluster: Peptide chain release factor subunit 1;... 47 5e-04
UniRef50_Q9YAF1 Cluster: Peptide chain release factor subunit 1;... 43 0.006
UniRef50_UPI00006CC094 Cluster: hypothetical protein TTHERM_0021... 34 2.6
UniRef50_Q8I368 Cluster: Putative uncharacterized protein PFI040... 34 3.4
UniRef50_A2DQW1 Cluster: DHHC zinc finger domain containing prot... 33 6.0
UniRef50_Q089V9 Cluster: Diguanylate cyclase; n=1; Shewanella fr... 33 7.9
>UniRef50_UPI0000DB724B Cluster: PREDICTED: similar to eukaryotic
release factor 1 CG5605-PA, isoform A; n=1; Apis
mellifera|Rep: PREDICTED: similar to eukaryotic release
factor 1 CG5605-PA, isoform A - Apis mellifera
Length = 265
Score = 163 bits (396), Expect = 3e-39
Identities = 87/100 (87%), Positives = 90/100 (90%), Gaps = 1/100 (1%)
Frame = +1
Query: 340 SEESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTVL-I 516
+EE+SADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGT I
Sbjct: 3 NEETSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNI 62
Query: 517 SSHV*IVSPVLGAITSVQHRLKLYTKVPPNGLVISXGTIV 636
S V +S VLGAITSVQHRLKLYTKVPPNGLVI GTIV
Sbjct: 63 KSRVNRLS-VLGAITSVQHRLKLYTKVPPNGLVIYCGTIV 101
>UniRef50_P62495 Cluster: Eukaryotic peptide chain release factor
subunit 1; n=137; Eukaryota|Rep: Eukaryotic peptide
chain release factor subunit 1 - Homo sapiens (Human)
Length = 437
Score = 150 bits (363), Expect = 3e-35
Identities = 80/99 (80%), Positives = 85/99 (85%), Gaps = 1/99 (1%)
Frame = +1
Query: 343 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTVL-IS 519
+ S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLADEFGT I
Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63
Query: 520 SHV*IVSPVLGAITSVQHRLKLYTKVPPNGLVISXGTIV 636
S V +S VLGAITSVQ RLKLY KVPPNGLV+ GTIV
Sbjct: 64 SRVNRLS-VLGAITSVQQRLKLYNKVPPNGLVVYCGTIV 101
>UniRef50_Q8SRZ6 Cluster: PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1;
n=1; Encephalitozoon cuniculi|Rep: PEPTIDE CHAIN RELEASE
FACTOR SUBUNIT 1 - Encephalitozoon cuniculi
Length = 386
Score = 115 bits (276), Expect = 1e-24
Identities = 59/91 (64%), Positives = 73/91 (80%), Gaps = 1/91 (1%)
Frame = +1
Query: 367 VEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTVL-ISSHV*IVSP 543
VE+W++KKL+++L +RGNGTSMIS+IIPPKDQISRVSKML DE+GT I S V +S
Sbjct: 5 VEMWRMKKLLRNLRDSRGNGTSMISIIIPPKDQISRVSKMLTDEYGTASNIKSRVNRLS- 63
Query: 544 VLGAITSVQHRLKLYTKVPPNGLVISXGTIV 636
VLGAITS Q +LK Y+K PPNGL I GT++
Sbjct: 64 VLGAITSAQSKLKQYSKTPPNGLGIFVGTVL 94
>UniRef50_Q98RP4 Cluster: Eukaryotic release factor 1 homolog; n=1;
Guillardia theta|Rep: Eukaryotic release factor 1
homolog - Guillardia theta (Cryptomonas phi)
Length = 409
Score = 93.9 bits (223), Expect = 3e-18
Identities = 50/88 (56%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Frame = +1
Query: 370 EIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTVL-ISSHV*IVSPV 546
E+WKIKK + L +GNGTSMISL+IP + IS+VSKML+DE T I S + S V
Sbjct: 9 ELWKIKKTYQYLSTIKGNGTSMISLVIPSNEHISKVSKMLSDELATASNIKSRI-NRSSV 67
Query: 547 LGAITSVQHRLKLYTKVPPNGLVISXGT 630
L AI+SVQ +LK YTK P NGL+I GT
Sbjct: 68 LSAISSVQQKLKYYTKTPNNGLIIYCGT 95
>UniRef50_Q9NCP1 Cluster: Eukaryotic peptide chain release factor
subunit 1; n=2; Giardia intestinalis|Rep: Eukaryotic
peptide chain release factor subunit 1 - Giardia lamblia
(Giardia intestinalis)
Length = 457
Score = 90.2 bits (214), Expect = 4e-17
Identities = 46/93 (49%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Frame = +1
Query: 358 DRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTVL-ISSHV*I 534
+R + IW++K+ I+ LE G+GTS+ISL+IPP +Q+S V+ ML +E+GT I S V
Sbjct: 15 ERQIAIWQLKRTIEKLESYTGSGTSVISLLIPPGEQLSSVTGMLTNEYGTASNIKSRV-N 73
Query: 535 VSPVLGAITSVQHRLKLYTKVPPNGLVISXGTI 633
+ VL AITS RLKLY ++PPNGL + G I
Sbjct: 74 KNAVLSAITSAMSRLKLYNRLPPNGLAVYCGEI 106
>UniRef50_Q9NAX8 Cluster: Eukaryotic peptide chain release factor
subunit 1; n=6; Trypanosomatidae|Rep: Eukaryotic peptide
chain release factor subunit 1 - Trypanosoma brucei
brucei
Length = 452
Score = 84.2 bits (199), Expect = 2e-15
Identities = 46/99 (46%), Positives = 68/99 (68%), Gaps = 1/99 (1%)
Frame = +1
Query: 343 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTVL-IS 519
E S +++ +E +K+KKLI+ LE ARG GTS+IS+ + PK+QIS + L +E+GT I
Sbjct: 5 ELSESEKAIERYKVKKLIQMLESARGMGTSVISIYMTPKEQISGMVTKLNNEYGTASNIK 64
Query: 520 SHV*IVSPVLGAITSVQHRLKLYTKVPPNGLVISXGTIV 636
SH +S V AIT+ RLK Y ++PPNGL++ GT++
Sbjct: 65 SHTNKLS-VQSAITASLGRLKQYNRLPPNGLLLYCGTVL 102
>UniRef50_Q5CD84 Cluster: Eukaryotic peptide chain release factor
subunit 1; n=5; Eukaryota|Rep: Eukaryotic peptide chain
release factor subunit 1 - Loxodes striatus
Length = 436
Score = 81.0 bits (191), Expect = 2e-14
Identities = 38/87 (43%), Positives = 56/87 (64%)
Frame = +1
Query: 376 WKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTVLISSHV*IVSPVLGA 555
WKI++LI+ LE A+GNGTS+ISLIIPPK+QIS +++ L D G + V A
Sbjct: 12 WKIRRLIEYLEKAKGNGTSLISLIIPPKEQISLINQKLTDAHGRAQNIKSKAVQKAVQDA 71
Query: 556 ITSVQHRLKLYTKVPPNGLVISXGTIV 636
I S + +L + ++PPNGL++ G +
Sbjct: 72 IISTKQKLSVIKQIPPNGLILYCGKFI 98
>UniRef50_A2EPZ2 Cluster: Eukaryotic release factor 1, putative;
n=2; Trichomonas vaginalis|Rep: Eukaryotic release
factor 1, putative - Trichomonas vaginalis G3
Length = 438
Score = 72.9 bits (171), Expect = 6e-12
Identities = 36/90 (40%), Positives = 54/90 (60%)
Frame = +1
Query: 367 VEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTVLISSHV*IVSPV 546
+E++KIK+LI L A G+GTSM++++IPP D + R+ + L DE GT + V
Sbjct: 14 IELFKIKRLINYLRDAHGDGTSMVTILIPPGDAVHRMRQKLTDELGTASNIKNRVNRQSV 73
Query: 547 LGAITSVQHRLKLYTKVPPNGLVISXGTIV 636
AIT+ +L + PPNGL + GTI+
Sbjct: 74 EAAITAAIQKLGQFNSTPPNGLCVFCGTII 103
>UniRef50_P58227 Cluster: Peptide chain release factor subunit 1;
n=5; Thermoplasmatales|Rep: Peptide chain release factor
subunit 1 - Thermoplasma volcanium
Length = 418
Score = 67.7 bits (158), Expect = 2e-10
Identities = 38/95 (40%), Positives = 48/95 (50%)
Frame = +1
Query: 358 DRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTVLISSHV*IV 537
D + ++ K+ ++ L G GT +ISL IPP+ QIS V L DE+ T
Sbjct: 7 DEQIRRYEFKRALEELSKLHGRGTELISLYIPPEKQISDVVAYLRDEYSTSSNIKSKSTR 66
Query: 538 SPVLGAITSVQHRLKLYTKVPPNGLVISXGTIVAR 642
VL AI S+ RLK Y PPNGLV G I R
Sbjct: 67 KNVLAAIESIMSRLKYYRFPPPNGLVFFVGHIATR 101
>UniRef50_Q8U0J4 Cluster: Peptide chain release factor subunit 1;
n=5; Archaea|Rep: Peptide chain release factor subunit 1
- Pyrococcus furiosus
Length = 420
Score = 63.3 bits (147), Expect = 5e-09
Identities = 32/91 (35%), Positives = 49/91 (53%)
Frame = +1
Query: 361 RNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTVLISSHV*IVS 540
R+ +++++KK I L+ RG GT +ISL IP +S+V + L +E+ T
Sbjct: 7 RDAQLYELKKKIDELKKIRGRGTELISLYIPAGYDLSKVMQQLREEYSTAQNIKSKTTRK 66
Query: 541 PVLGAITSVQHRLKLYTKVPPNGLVISXGTI 633
VLGA+ LKLY + P NGL + G +
Sbjct: 67 NVLGALERAMQHLKLYKQTPENGLALFVGNV 97
>UniRef50_Q965E7 Cluster: Eukaryotic polypeptide chain release
factor 1; n=3; Paramecium tetraurelia|Rep: Eukaryotic
polypeptide chain release factor 1 - Paramecium
tetraurelia
Length = 437
Score = 55.2 bits (127), Expect = 1e-06
Identities = 33/95 (34%), Positives = 51/95 (53%)
Frame = +1
Query: 349 SSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTVLISSHV 528
+ A+ +E +++KKLIK+L R GTS++S+ IPPK IS ++ L ++
Sbjct: 6 NDAEIALEQFRLKKLIKTLSQERTAGTSVVSVYIPPKRIISDITNRLNTQYAEAASIKDK 65
Query: 529 *IVSPVLGAITSVQHRLKLYTKVPPNGLVISXGTI 633
V AI + RL+ Y K P NGLV+ G +
Sbjct: 66 GNRISVQEAIQAAILRLRPYNKAPNNGLVVFCGIV 100
>UniRef50_Q74N59 Cluster: NEQ052; n=1; Nanoarchaeum equitans|Rep:
NEQ052 - Nanoarchaeum equitans
Length = 358
Score = 54.0 bits (124), Expect = 3e-06
Identities = 30/91 (32%), Positives = 45/91 (49%)
Frame = +1
Query: 370 EIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTVLISSHV*IVSPVL 549
E +K+K L++ L+ G GT ++SL IP I ++ L E+ T V
Sbjct: 5 EKYKLKSLLRQLKSIEGRGTELVSLYIPSNYPIGKILDQLNYEYATAANIKDDTTRKNVQ 64
Query: 550 GAITSVQHRLKLYTKVPPNGLVISXGTIVAR 642
A+ + + LK + K+P NGLVI G I R
Sbjct: 65 AALAKIINYLKDFKKIPENGLVIFAGNIAGR 95
>UniRef50_A7DMG3 Cluster: ERF1 domain 2 protein; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: ERF1 domain 2 protein
- Candidatus Nitrosopumilus maritimus SCM1
Length = 426
Score = 54.0 bits (124), Expect = 3e-06
Identities = 30/90 (33%), Positives = 47/90 (52%)
Frame = +1
Query: 364 NVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTVLISSHV*IVSP 543
+V+++KI+K ++ L G GT +I++ IP Q+ + L E GT S
Sbjct: 11 SVKVYKIRKTLEELSKKSGRGTELITVYIPKGKQLHEIIGTLQQEQGTADNIKSDLTRSH 70
Query: 544 VLGAITSVQHRLKLYTKVPPNGLVISXGTI 633
V+ ++ V RLKLY K P GLV+ G +
Sbjct: 71 VVDSLGKVVQRLKLYKKTPERGLVMFCGAL 100
>UniRef50_A0RX46 Cluster: Peptide chain release factor 1; n=2;
Crenarchaeota|Rep: Peptide chain release factor 1 -
Cenarchaeum symbiosum
Length = 411
Score = 53.6 bits (123), Expect = 4e-06
Identities = 29/87 (33%), Positives = 46/87 (52%)
Frame = +1
Query: 373 IWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTVLISSHV*IVSPVLG 552
++KI+K++ L G GT +IS+ IP Q+ + +L +E GT + V+
Sbjct: 1 MYKIRKMLDELSGISGRGTELISVYIPKGKQLHEIISVLKEEQGTADNIKSDLTRTHVVD 60
Query: 553 AITSVQHRLKLYTKVPPNGLVISXGTI 633
++ V RL+LY K P GLVI G +
Sbjct: 61 SLAKVVQRLRLYKKTPERGLVIFCGAL 87
>UniRef50_Q9HNF0 Cluster: Peptide chain release factor subunit 1;
n=7; Euryarchaeota|Rep: Peptide chain release factor
subunit 1 - Halobacterium salinarium (Halobacterium
halobium)
Length = 416
Score = 51.6 bits (118), Expect = 2e-05
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Frame = +1
Query: 331 NKMSEESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTV 510
++ E S DR ++ +K+I+ L+ G+GT ++++ IPP QIS V + E
Sbjct: 2 SEQDEVPSEDRRK--YEFRKVIEELKDYEGSGTQLVTIYIPPDKQISDVVAHVTQEHSEA 59
Query: 511 LISSHV*IVSPVLGAITSVQHRLKLYTKVPP-NGLVISXGTI 633
+ V A+TS++ RL+ Y PP NG+V+ G +
Sbjct: 60 SNIKSKQTRTNVQDALTSIKDRLRYYDTFPPDNGMVVFSGAV 101
>UniRef50_Q8TS00 Cluster: Peptide chain release factor subunit 1-2;
n=9; Euryarchaeota|Rep: Peptide chain release factor
subunit 1-2 - Methanosarcina acetivorans
Length = 415
Score = 50.8 bits (116), Expect = 3e-05
Identities = 31/88 (35%), Positives = 47/88 (53%)
Frame = +1
Query: 370 EIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTVLISSHV*IVSPVL 549
E + KK +++L+ G T +ISL IPP QIS V+K L +E I + V
Sbjct: 8 EKYVFKKQLETLKSKNGRSTELISLYIPPDKQISDVTKHLREEHEQASNIISKLIRNNVQ 67
Query: 550 GAITSVQHRLKLYTKVPPNGLVISXGTI 633
A+ S+ +L+ K+P NG+V GT+
Sbjct: 68 EALHSLLAKLRSLHKIPENGIVYFTGTV 95
>UniRef50_Q46FF0 Cluster: Peptide chain release factor, subunit 1;
n=2; Methanosarcinaceae|Rep: Peptide chain release
factor, subunit 1 - Methanosarcina barkeri (strain
Fusaro / DSM 804)
Length = 415
Score = 46.8 bits (106), Expect = 5e-04
Identities = 29/88 (32%), Positives = 43/88 (48%)
Frame = +1
Query: 370 EIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTVLISSHV*IVSPVL 549
E + KK +++L G T +ISL IP QIS V+ L +E + V
Sbjct: 8 EKYVFKKKLETLRNKNGKSTELISLYIPSDKQISDVTNHLREEHEQASKIKSKLTSNNVQ 67
Query: 550 GAITSVQHRLKLYTKVPPNGLVISXGTI 633
GA+ S+ +L+ K+P NG+V G I
Sbjct: 68 GALDSLLAKLRSLNKIPENGIVYFTGVI 95
>UniRef50_Q58239 Cluster: Peptide chain release factor subunit 1;
n=12; Euryarchaeota|Rep: Peptide chain release factor
subunit 1 - Methanococcus jannaschii
Length = 421
Score = 46.8 bits (106), Expect = 5e-04
Identities = 28/88 (31%), Positives = 45/88 (51%)
Frame = +1
Query: 370 EIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTVLISSHV*IVSPVL 549
+++ KK++K L+ +G GT +ISL IP +IS V++ L +E V
Sbjct: 8 QLYLFKKMLKELKSKKGKGTELISLYIPAGRRISDVAQHLREEMSQASNIKSKSTRKNVQ 67
Query: 550 GAITSVQHRLKLYTKVPPNGLVISXGTI 633
AI ++ RLKL + G+VI G +
Sbjct: 68 SAIEAILQRLKLLKEPLEKGVVIFAGMV 95
>UniRef50_Q9YAF1 Cluster: Peptide chain release factor subunit 1;
n=9; Thermoprotei|Rep: Peptide chain release factor
subunit 1 - Aeropyrum pernix
Length = 373
Score = 43.2 bits (97), Expect = 0.006
Identities = 25/83 (30%), Positives = 41/83 (49%)
Frame = +1
Query: 379 KIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTVLISSHV*IVSPVLGAI 558
++ +L+K L+ T ++SL IPP +S V +L E+ V A+
Sbjct: 16 ELARLLKELKKWSAPATVLLSLYIPPGRPLSDVMTLLRQEYSITDNIKLKRTRQAVKRAL 75
Query: 559 TSVQHRLKLYTKVPPNGLVISXG 627
++ RL++ T PPNGLV+ G
Sbjct: 76 SAAMDRLQMLTSTPPNGLVLFCG 98
>UniRef50_UPI00006CC094 Cluster: hypothetical protein
TTHERM_00215930; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00215930 - Tetrahymena
thermophila SB210
Length = 905
Score = 34.3 bits (75), Expect = 2.6
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +1
Query: 379 KIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTVLIS 519
K++ LI+ L NGT+ +SL I K Q +++S+ L DEF + +S
Sbjct: 182 KVEYLIEQLLEGSNNGTNTLSLKILQKQQANQLSQDLKDEFFKLYVS 228
>UniRef50_Q8I368 Cluster: Putative uncharacterized protein PFI0400c;
n=2; Plasmodium|Rep: Putative uncharacterized protein
PFI0400c - Plasmodium falciparum (isolate 3D7)
Length = 352
Score = 33.9 bits (74), Expect = 3.4
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = -1
Query: 465 LILXWNDQGYHRCSISSGHFQTLYKFLYLPYFDISIGRRFFRHFVSLFI*LINHKHYI 292
+IL W+ Y +SS H QTLY FL + + I++ +FV + I + + I
Sbjct: 172 IILFWSQVYYASVLVSSPHLQTLYIFLNVLVYAINVILASLAYFVKAYFDYIYYNYII 229
>UniRef50_A2DQW1 Cluster: DHHC zinc finger domain containing
protein; n=1; Trichomonas vaginalis G3|Rep: DHHC zinc
finger domain containing protein - Trichomonas vaginalis
G3
Length = 347
Score = 33.1 bits (72), Expect = 6.0
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = -1
Query: 384 YLPYFDISIGRRFFRHFVSLFI*LINHKHYICINN*NNVFAQHQTLNKRILWKGS 220
Y P+ + IG R R+F+ I I Y CIN+ VF + +RI W S
Sbjct: 172 YCPWVLVPIGERNHRYFLLFLIACIVASTYYCINDVFVVFFYFMQVYQRIPWTNS 226
>UniRef50_Q089V9 Cluster: Diguanylate cyclase; n=1; Shewanella
frigidimarina NCIMB 400|Rep: Diguanylate cyclase -
Shewanella frigidimarina (strain NCIMB 400)
Length = 426
Score = 32.7 bits (71), Expect = 7.9
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
Frame = +1
Query: 250 SLVLCKDIILVIYTNIVFVVN*LNKKRNKMSEESSADRNVEIWKIKKLIKSLEMARG--- 420
SLV+ IIL++ TN+V N L + K++ ++ D+ +W L+ LE
Sbjct: 211 SLVMWSYIILLLLTNLVLFGNALTRLVYKVARLANKDQLTGLWNRHSLLNKLEEVDALWL 270
Query: 421 -NGTSMISLIIPPKDQISRVSKMLADEFGTVLISSHV*IVSPVLGAITSV 567
NG + SL++ D R++ G +++ + I+ L I V
Sbjct: 271 RNGLA-YSLMVLDLDHFKRINDTYGHLAGDMVLKNTADILQKSLRKIDFV 319
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,336,247
Number of Sequences: 1657284
Number of extensions: 12484611
Number of successful extensions: 29823
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 28873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29798
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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