Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0447.Seq
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    26   0.31 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          25   0.41 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.2  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.9  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   6.6  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   6.6  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   6.6  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   6.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   6.6  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   8.7  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 16/87 (18%), Positives = 42/87 (48%)
 Frame = +1

Query: 328 RNKMSEESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGT 507
           +N + +  +  R     K+K   ++L+ A      M +++   K+ ++  ++ +     +
Sbjct: 290 QNLLKDTEAEVRAAAANKVKDFCQNLDKAHQESIIMNNILPCVKELVADPNQHVKSALAS 349

Query: 508 VLISSHV*IVSPVLGAITSVQHRLKLY 588
           V++      +SP+LG   +++H L L+
Sbjct: 350 VIMG-----LSPILGRHNTIEHLLPLF 371


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -1

Query: 219 PNSSFKLP*SSLNRTDETPRDSDHTF*FTFTS 124
           P +SFKL  SS +  DE PR    T   TF++
Sbjct: 91  PTTSFKLKDSSSDSEDERPRPGGGTKYQTFSN 122


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/20 (55%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = +2

Query: 2   FVQRHLLFL*CLN-FVFHML 58
           F   HLLFL CL+ F  H+L
Sbjct: 188 FFNMHLLFLLCLDYFTLHLL 207


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 268 DIILVIYTNIVFVVN*LNK 324
           D++L IY+ +VF+   +NK
Sbjct: 212 DLVLPIYSQLVFMCKKINK 230


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 372 NMEDKETYKEFGNGQRK 422
           N  + E YKE  NG+RK
Sbjct: 204 NNNNIELYKEIFNGKRK 220


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 417 SGHFQTLYKFLYLPYF 370
           S HF  + +FL LP++
Sbjct: 70  SAHFSFMSRFLCLPFY 85


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 417 SGHFQTLYKFLYLPYF 370
           S HF  + +FL LP++
Sbjct: 26  SAHFSFMSRFLCLPFY 41


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 499 IHQPTSLILSRFD 461
           IHQP+S + S FD
Sbjct: 276 IHQPSSEVYSMFD 288


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 499 IHQPTSLILSRFD 461
           IHQP+S + S FD
Sbjct: 276 IHQPSSEVYSMFD 288


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -2

Query: 608 PFGGTLVYSLSRCCTEVIAPSTGETIHT 525
           PFGG   ++L+  C E+      +  HT
Sbjct: 118 PFGGVRDHNLTTLCQELGISVVQKVSHT 145


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,457
Number of Sequences: 336
Number of extensions: 3272
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)