Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0447.Seq
         (648 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X81625-1|CAA57281.1|  437|Homo sapiens C11 protein protein.           150   5e-36
U90176-1|AAB49726.1|  437|Homo sapiens eukaryotic release factor...   150   5e-36
BC088358-1|AAH88358.1|  437|Homo sapiens eukaryotic translation ...   150   5e-36
AF095901-1|AAD43966.1|  437|Homo sapiens eRF1 protein.                150   5e-36
M75715-1|AAA36665.1|  428|Homo sapiens TB3-1 protein.                 147   3e-35
BT007374-1|AAP36038.1|  404|Homo sapiens eukaryotic translation ...    97   4e-20
BC014269-1|AAH14269.1|  404|Homo sapiens ETF1 protein protein.         97   4e-20

>X81625-1|CAA57281.1|  437|Homo sapiens C11 protein protein.
          Length = 437

 Score =  150 bits (363), Expect = 5e-36
 Identities = 80/99 (80%), Positives = 85/99 (85%), Gaps = 1/99 (1%)
 Frame = +1

Query: 343 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTVL-IS 519
           + S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLADEFGT   I 
Sbjct: 4   DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63

Query: 520 SHV*IVSPVLGAITSVQHRLKLYTKVPPNGLVISXGTIV 636
           S V  +S VLGAITSVQ RLKLY KVPPNGLV+  GTIV
Sbjct: 64  SRVNRLS-VLGAITSVQQRLKLYNKVPPNGLVVYCGTIV 101


>U90176-1|AAB49726.1|  437|Homo sapiens eukaryotic release factor 1
           protein.
          Length = 437

 Score =  150 bits (363), Expect = 5e-36
 Identities = 80/99 (80%), Positives = 85/99 (85%), Gaps = 1/99 (1%)
 Frame = +1

Query: 343 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTVL-IS 519
           + S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLADEFGT   I 
Sbjct: 4   DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63

Query: 520 SHV*IVSPVLGAITSVQHRLKLYTKVPPNGLVISXGTIV 636
           S V  +S VLGAITSVQ RLKLY KVPPNGLV+  GTIV
Sbjct: 64  SRVNRLS-VLGAITSVQQRLKLYNKVPPNGLVVYCGTIV 101


>BC088358-1|AAH88358.1|  437|Homo sapiens eukaryotic translation
           termination factor 1 protein.
          Length = 437

 Score =  150 bits (363), Expect = 5e-36
 Identities = 80/99 (80%), Positives = 85/99 (85%), Gaps = 1/99 (1%)
 Frame = +1

Query: 343 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTVL-IS 519
           + S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLADEFGT   I 
Sbjct: 4   DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63

Query: 520 SHV*IVSPVLGAITSVQHRLKLYTKVPPNGLVISXGTIV 636
           S V  +S VLGAITSVQ RLKLY KVPPNGLV+  GTIV
Sbjct: 64  SRVNRLS-VLGAITSVQQRLKLYNKVPPNGLVVYCGTIV 101


>AF095901-1|AAD43966.1|  437|Homo sapiens eRF1 protein.
          Length = 437

 Score =  150 bits (363), Expect = 5e-36
 Identities = 80/99 (80%), Positives = 85/99 (85%), Gaps = 1/99 (1%)
 Frame = +1

Query: 343 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTVL-IS 519
           + S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLADEFGT   I 
Sbjct: 4   DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63

Query: 520 SHV*IVSPVLGAITSVQHRLKLYTKVPPNGLVISXGTIV 636
           S V  +S VLGAITSVQ RLKLY KVPPNGLV+  GTIV
Sbjct: 64  SRVNRLS-VLGAITSVQQRLKLYNKVPPNGLVVYCGTIV 101


>M75715-1|AAA36665.1|  428|Homo sapiens TB3-1 protein.
          Length = 428

 Score =  147 bits (357), Expect = 3e-35
 Identities = 79/99 (79%), Positives = 84/99 (84%), Gaps = 1/99 (1%)
 Frame = +1

Query: 343 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTVL-IS 519
           + S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLADEFGT   I 
Sbjct: 4   DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63

Query: 520 SHV*IVSPVLGAITSVQHRLKLYTKVPPNGLVISXGTIV 636
           S V  +S VLGAITSVQ RLKLY KVPPNGL +  GTIV
Sbjct: 64  SRVNRLS-VLGAITSVQQRLKLYNKVPPNGLEVYCGTIV 101


>BT007374-1|AAP36038.1|  404|Homo sapiens eukaryotic translation
           termination factor 1 protein.
          Length = 404

 Score = 97.5 bits (232), Expect = 4e-20
 Identities = 54/69 (78%), Positives = 57/69 (82%), Gaps = 1/69 (1%)
 Frame = +1

Query: 433 MISLIIPPKDQISRVSKMLADEFGTVL-ISSHV*IVSPVLGAITSVQHRLKLYTKVPPNG 609
           MISLIIPPKDQISRV+KMLADEFGT   I S V  +S VLGAITSVQ RLKLY KVPPNG
Sbjct: 1   MISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLS-VLGAITSVQQRLKLYNKVPPNG 59

Query: 610 LVISXGTIV 636
           LV+  GTIV
Sbjct: 60  LVVYCGTIV 68


>BC014269-1|AAH14269.1|  404|Homo sapiens ETF1 protein protein.
          Length = 404

 Score = 97.5 bits (232), Expect = 4e-20
 Identities = 54/69 (78%), Positives = 57/69 (82%), Gaps = 1/69 (1%)
 Frame = +1

Query: 433 MISLIIPPKDQISRVSKMLADEFGTVL-ISSHV*IVSPVLGAITSVQHRLKLYTKVPPNG 609
           MISLIIPPKDQISRV+KMLADEFGT   I S V  +S VLGAITSVQ RLKLY KVPPNG
Sbjct: 1   MISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLS-VLGAITSVQQRLKLYNKVPPNG 59

Query: 610 LVISXGTIV 636
           LV+  GTIV
Sbjct: 60  LVVYCGTIV 68


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,713,356
Number of Sequences: 237096
Number of extensions: 1846817
Number of successful extensions: 3566
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3548
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)